Cygnus atratus (black swan): 118243055
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Entry
118243055 CDS
T09349
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X2
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cata04040
]
118243055
Ion channels [BR:
cata04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
118243055
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
ATP-synt_B
Neur_chan_memb
HB_ELP1
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
118243055
NCBI-ProteinID:
XP_035392613
LinkDB
All DBs
Position
6:complement(21256992..21312445)
Genome browser
AA seq
2018 aa
AA seq
DB search
MAQSVLVPPGPDSFRYFTRESLAAIEQRINEEKAKKSKQERKDDDDEDGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYMLTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFETTVISYFNSSI
GENGTFINTTMTIFNWDEYIEDRNHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAAAADSRDYSGVGGI
GGFSESSSEASKLSSKSAKERRNRRKKKKQKEQSEGEEKDEEEFRKSESEDSIKRKGFRF
SIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHS
TFEDNESRRDSLFVPHRHGERRNSNISQASRSSRTVPPLPVNGKMHSTVDCNGVVSLVGG
PPALTSPTGQLLPEVMIDKAATASNGTTTETDLRKRRSSSYHVPMDYLTDPSARQRAMSI
ASMLTNTMEELEESRQKCPPCWYKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITI
CIVLNTLFMAMEHYPMTEQFSGVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFD
GFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLV
LAIIVFIFAVVGMQLFGKSYKECVCKISSDCELPRWHMHDFFHSFLIVFRVLCGEWIETM
WDCMEVAGQTMCLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAV
ARIQKGIDYVKRKVREFIQKAFVRKQKVLDEIKPLEDLNNKKDSCISNHTIVEIGKNLAY
LKEGNGTTSGIGSSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESD
LEESKEKLNASSSSEGSTVDIGLPPEGEQPEVEPEESLEPEACFTEGCVRRFKCCQVSVE
DGKGKIWWNLRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADK
VFTYIFILEMLLKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRT
LRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCV
NTTTDERFDISQINNYSQCEELIKNNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDI
MYAAVDSRNVLDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQD
IFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQAFDISIMILICLNMVT
MMVETDDQSEDMENILYWINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIV
GMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLL
FLVMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSG
EPDCDPHKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESA
EPLSEDDFEMFYEVWEKFDPDATQFIEFSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMV
SGDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEV
SAVVIQRAFRRHLLRQKVKKVSCIFNQDKGKDEDDLPTKEDMIMDKLNENSTPEKTDMTP
STTSPPSYDSVTKPDKDKYEKDKSEKEDKGKDSRESKK
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccaccaggacctgacagcttccgctatttcacaagagaa
tcacttgcagcgattgaacagcgtatcaatgaagaaaaagctaagaagtccaaacaagaa
cgtaaagatgatgatgatgaagatggcccaaagccaaacagcgacttggaggcaggaaaa
acactgccatttatttatggtgacatacctccaggaatggtgtccgagcccttggaagac
ctggacccatattatatcaataaaaaaacctttatagtattgaataaagggaaggcaata
ttccgattcagtgccacctctgccctgtacatgttaactcctttcaatcctcttagaaaa
atagctattaagattttggtacattcattattcagcatgcttatcatgtgcactattttg
accaactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtagaatac
acattcactggaatttatacctttgaatcacttattaaaattcttgcaaggggcttctgc
ttagaagattttacatttcttcgagacccatggaattggctagatttcactgtcattaca
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagctttgaaaacaatatcagtcattccaggcttgaagactatcgtgggagcc
ctaattcagtctgtgaagaagctctcagatgttatgatcctgactgtgttttgtctaagt
gtatttgcactaatagggctgcagctgttcatgggcaacttgaggaataaatgcctgcag
tggcctccagacaattctacttttgaaacaactgttatttcctactttaatagctctata
ggtgaaaacggcacatttattaatacaactatgacaatatttaactgggatgagtacatc
gaagatagaaatcatttctatttcttggaaggacaaaatgatgctctgctgtgtggcaat
agctcagatgcaggtcaatgtccagaaggatatatatgtgtgaaagctggtagaaacccc
aactatggctacacaagttttgatacattcagttgggcattcttgtcactgtttcgattg
atgactcaggacttttgggagaatctttaccagctgacactgcgtgctgctgggaaaaca
tacatgatattttttgttttggtcattttcctgggttctttctacctgattaacttgatc
ctggctgtggttgccatggcctatgaagaacagaatcaagcaaccatggaagaagcagaa
cagaaagaagcagaatttcagcaaatgctggaacaactgaaaaagcaacaggaagaagct
caggcagcagcagcagctgcagcagctgactcaagagattatagtggagtaggtggaata
ggtggattctctgaaagctcttctgaggcatcaaaactgagctcaaagagtgctaaagag
aggaggaatagaagaaagaaaaaaaagcaaaaagaacagtctgaaggcgaggaaaaggat
gaggaagaatttcgcaagtccgaatcagaggacagcatcaaaaggaaaggcttccgattt
tccattgaggggaatagactgacatatgaaaagagattctcttccccacaccagtctttg
ctgagcattcgcggctccctgttttccccaaggcgcaatagcagaacaagtcttttcagc
ttcagaggtcgagcaaaggatgtaggatcagaaaatgactttgctgatgatgagcacagc
acttttgaagacaatgagagcagaagagattctctctttgttcctcatagacatggtgaa
cggcgcaacagtaacattagtcaggccagtaggtcatccaggacagtacctccacttcca
gtgaatgggaagatgcacagcactgtggattgcaatggagtagtttctttagtcggtggg
cctccagctctgacgtcacctactggacagcttctgccagaggtgatgattgataaagca
gccactgctagcaatggcactactacagagactgacttaagaaagagacgatctagttct
taccatgttcctatggactacctaacagatcctagtgcaaggcaaagagcaatgagtata
gccagcatgcttacaaatacaatggaagaacttgaagaatcaagacagaaatgcccacca
tgctggtacaaatttgctaacacttgcttgatttgggactgttgcactccctggctgaaa
gtcaaacatattgtaaatttgattgtgatggacccatttgttgatctggccattactatc
tgcattgttcttaataccctgttcatggccatggaacactatccaatgacagaacagttc
agtggtgtgctttcagtaggaaaccttgtgtttactggaattttcacagcagaaatgttt
ctcaagataattgccatggatccttactattatttccaagagggctggaatatttttgat
ggttttattgtgagtcttagtttaatggagcttggccttgcaaatgtagaaggattatct
gtccttcgatcattccgattgctacgagttttcaagttggcaaaatcttggccaactcta
aatatgctcattaagattattggcaactcagtgggggctttggggaatttgaccctggtg
ctggccatcattgtgttcattttcgctgtggttgggatgcagctgtttgggaaaagctac
aaggaatgtgtctgcaagatctccagtgattgtgaacttccacgctggcacatgcatgac
tttttccactctttcttgattgtgttccgagtgttgtgtggagaatggatagaaacaatg
tgggactgcatggaggttgcaggccaaactatgtgccttactgtctttatgatggtcatg
gtgattggaaacctagtggtactcaacctctttctggccttgctgctgagctcctttagt
tcagacaaccttgctgctacagatgatgataatgaaatgaacaatctacagattgctgtg
gcaaggattcagaagggcatagactatgtgaagagaaaagtgcgtgaattcatccaaaaa
gcctttgttagaaagcaaaaagttttagatgaaatcaaacctcttgaagacctaaacaac
aaaaaagacagctgtatttccaatcacacgatagtagaaataggtaaaaaccttgcctat
cttaaagaagggaatggaactacaagtggcataggcagcagcgtggaaaaatatgttgtt
gatgaaagtgattacatgtcattcataaacaacccaagtctcactgtgacagtgccaatt
gctgttggcgaatctgatttcgaaaacttaaatacagaagagtttagcagcgagtcagac
ctggaagaaagcaaagagaaattaaatgcatctagttcatcagaaggcagcacggttgat
attggactacctccagaaggagaacagccagaagtagaacctgaagaatctctggagcca
gaggcttgtttcacagaaggctgtgtgcggagattcaagtgctgtcaagtcagtgtagaa
gatgggaaagggaaaatctggtggaatcttaggaaaacctgctataagattgttgaacac
aactggtttgagaccttcattgtcttcatgattcttctcagcagtggtgctctggcattt
gaagatatatacatagaacagcgtaaaactatcaagaccatgctggaatatgctgacaaa
gtttttacttacatcttcattctggaaatgcttttaaaatgggtggcttatggctttcaa
acctatttcactaatgcatggtgctggctggacttcctgattgttgatgtctctttggtt
agcttaacagctaatgccttgggctactcagaacttggtgcgattaaatcccttaggaca
ctaagagctttgagacctctaagagccttgtcgcgatttgaagggatgagggtggttgtg
aatgccctcttaggagccattccatccattatgaatgtgcttcttgtttgccttatattc
tggctgatcttcagtatcatgggagtaaatctatttgctggaaaattttattactgtgtt
aacactacgactgatgagagatttgacatcagccaaatcaacaattacagccaatgtgaa
gaactcataaaaaacaatgaaactgccagatggaagaatgtgaaggttaactttgataat
gtaggccttggttatctttctctgcttcaagtggctacatttaaaggatggatggatatc
atgtatgcagctgtggattctcgcaatgttttggatcagcctaaatatgaagataacctg
tacatgtatctttactttgtcatctttatcatctttggatcattctttaccttgaacctt
ttcattggtgtcatcatagacaatttcaaccagcagaaaaagaagtttggaggtcaagat
atttttatgacagaagaacagaagaaatactacaatgcaatgaaaaagttgggttcaaag
aaaccacaaaagcctataccacgaccagcaaacaaattccaaggcatggtctttgatttt
gtaacaaaacaagcatttgatatcagtataatgatacttatctgccttaacatggtcaca
atgatggtagaaacagatgatcagagtgaagacatggaaaacattttatattggattaac
ctggtgtttatcgtacttttcactggagaatgtgtcctgaaattgatttcacttcgccat
tactactttactataggctggaatatttttgatttcgtggttgtcattctctccatagta
ggtatgttcttagctgagatgattgagaaatattttgtgtcccccactttgttccgagtc
atccgacttgccagaataggtcgaatcctgcgtctcattaaaggcgctaagggaatccgc
actctgctctttgctttgatgatgtctcttcctgctttgttcaacattggtctgctgctg
ttcctggtcatgtttatctatgcgatatttggcatgtccaactttgcctacgttaagagg
gaggttgggattgatgacatgttcaactttgaaacatttggcaacagcatgatctgccta
tttcaaatcaccacatctgctggctgggatggtttgttagccccaattctgaacagtggg
gagccggactgtgaccctcataaagatcatccggggagctctgttaaaggcgactgcggc
aacccttccgttgggattttcttctttgtcagctacatcatcatatcctttctggtagtg
gtgaacatgtacattgctgtgattctggagaacttcagtgttgctactgaagaaagtgct
gagcctctgagcgaggatgactttgagatgttctatgaagtctgggagaagtttgatcca
gatgcaacacaattcatagagttcagtaaactatcagattttgcagcttcgttagatcct
cctcttctcatagcaaaaccaaacaaagtccagcttattgcaatggatctgcccatggta
agcggtgacagaattcactgccttgacatcttgtttgctttcacaaagcgtgtcctgggg
gaaagtggggagatggatgccctcagaatccagatggaagatcgttttatggcagccaat
ccatctaaagtctcctatgaaccaatcacaaccacattaaaacggaaacaggaggaggta
tctgctgttgttattcaacgtgctttcaggcgtcaccttttaaggcaaaaagtcaaaaaa
gtttcatgtatatttaatcaggataaaggtaaagatgaagatgatctgcccacaaaagaa
gatatgattatggataaactaaatgagaactccactccagagaaaacagatatgaccccg
tccacaacctccccaccatcctatgacagtgtaacaaagccagacaaggataaatatgaa
aaagacaaatcagaaaaagaagataaaggtaaagacagcagggaaagtaaaaagtaa
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integrated database retrieval system
