Cygnus atratus (black swan): 118243095
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Entry
118243095 CDS
T09349
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118243095 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cata03019
]
118243095 (BARD1)
04121 Ubiquitin system [BR:
cata04121
]
118243095 (BARD1)
03036 Chromosome and associated proteins [BR:
cata03036
]
118243095 (BARD1)
03400 DNA repair and recombination proteins [BR:
cata03400
]
118243095 (BARD1)
Messenger RNA biogenesis [BR:
cata03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
118243095 (BARD1)
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
118243095 (BARD1)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
118243095 (BARD1)
DNA repair and recombination proteins [BR:
cata03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
118243095 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_4
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
zf-C3HC4_2
zf-C3HC4
NIBRIN_BRCT_II
PTCB-BRCT
ANK_LRRK2
zf-C3HC4_4
zf-RING_10
zf-RING_UBOX
RTT107_BRCT_5
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
118243095
NCBI-ProteinID:
XP_035392712
LinkDB
All DBs
Position
6:complement(8675005..8721284)
Genome browser
AA seq
788 aa
AA seq
DB search
MAAGPREALRGRSGNRLDPGGQPGPMAPPGHPWALTRAALGRLERALSCSRCAGILSEPV
SLGRCEHVFCLSCVGDCVGTECPVCHMPAWVQDVQINRQLDNMIQLCSKLRHLLGADTSD
STECISTPTGSDSGKKSKKEQIKMWFSPRSRKIRCILNKGQPKTKSDGPCQDPSSVYHFF
PSPPHEKPKPTKKPAQTQSKNMKKKRLADINKVWGLGKPEHKGGVEEKTSKEKCVTICSQ
PVVLCTPEPTSPEETLPQEPLKEADSNTNVEKLEMSPEVQSSEENNSLDACPAHVSKEKN
CATEESPSIGNETTPLKRGREQSSLPVSSQTKRRRRAEGSTSGRAGRQAARLEESPQGSP
ISQATEPKTPVQVSSSVSRLAGTAMKTRSSAAMNSPSFPKSPSTPSTSKACNQVGTPHSP
SVFKSPGGANAVARRNYKGETLLHVASIKGDLGAVEQLLKNGADPNVKDNAGWTPLHEAC
NHGHKAVVELLLQHKALVNTTGYQNDSPLHDAVKNGHVSIAELLLLHGASRDAVNIFGLR
PVDYADSEKMKSVLMLPVKNESFSLSQPSESQSPSQPRDGPLGILGSSLSSEQQKLLNKL
VTVLKARRCTEFNSTVTHLVIPDVPMPSTVKCLMAVLTGCWVLKFEWVRACLQSTVREQE
EKYEIQGGPQRSRLNREQLLPKLFDGCYFYFLGSFSSHQKSDLVELVKAAGGQILVRQPK
PDSDVTQMINTVAYHAESTSDQRFCTQYVIYDVSSKFKPEKIRQGKVWMAPSSWIIDCVM
SFQLLPVK
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggggccccgtgaggcgctgcgcggccgctccggcaaccggctggacccgggc
gggcagcccggccccatggcgcctccggggcacccctgggcgctcacccgagccgcgctg
gggcggctggagagggcgctgagctgctcccgctgcgcaggtattctgagcgagcccgtg
tccctggggcggtgcgagcacgtcttctgcctatcttgtgtgggcgactgtgtcggcaca
gaatgcccggtgtgccacatgccagcctgggtgcaagatgtgcagataaaccggcagcta
gataacatgatccagctttgcagcaaactgcggcatctgttgggcgcagacacctcggat
tcaacagaatgtatatccacaccaacaggctccgactctgggaaaaagagtaagaaggaa
cagataaaaatgtggttcagcccaagaagcaggaagattcgatgcatcctgaacaagggt
cagcctaagactaaaagcgatggcccttgccaagacccatcttcagtttatcacttcttt
ccttcccctcctcacgaaaaacccaagccaacaaaaaagccagcacagacgcaaagtaag
aacatgaagaaaaaacgtctagcagacatcaacaaagtgtggggcttagggaaacctgag
cacaaaggaggagttgaggagaagacttccaaggaaaagtgtgtgaccatttgtagccag
ccagtcgtcctgtgcactccagagcctactagccctgaagagacacttccacaggagcct
ctaaaggaagctgactccaacacaaatgtggagaaattagaaatgtcaccagaggtacaa
tcctcagaggagaataacagcttggatgcctgtcctgcacatgtcagcaaggaaaaaaat
tgtgctacagaggaatccccgtcaataggaaatgaaactacgcctttgaaacgtggaagg
gagcaatcaagcctcccagtttcgtctcagactaaaaggcgccgaagagctgaggggagc
actagtgggagggcaggcaggcaggcagctcgcttggaggagtcgcctcagggcagcccc
atctcccaagcgactgaacccaagacacctgttcaggtttcctcctctgtatcaaggctt
gctggcactgcgatgaagacaagaagctctgcagcaatgaatagtccttcgtttcccaaa
tctccctctactccctctacttccaaggcgtgtaatcaagtaggaacaccacacagtcct
tctgtgttcaagtcccctggtggtgctaacgcggttgcccgaagaaactacaaaggagag
actttgctccacgttgcttccatcaagggtgacttaggagctgttgaacagctgctgaaa
aatggggcagatcccaatgttaaggacaatgctggctggacaccactgcacgaggcatgt
aaccatgggcacaaagcggtggtggagctgctgctgcaacacaaagcactggtgaacacc
acgggctatcagaacgactcgcccctgcacgatgctgtcaagaacgggcacgtgagcatt
gctgagctgctgcttttgcacggggcctcccgcgatgcagttaatatatttggtctgcgg
cctgtggactatgcagacagtgaaaagatgaagtctgtgctaatgttaccagtgaagaat
gaatcattttcacttagccagccctctgagtcacagagccctagccagccaagagatgga
cctcttggcatactggggagcagtcttagttcagagcagcagaaactgctgaacaagcta
gtgacagtcctgaaggctcgaaggtgtaccgagtttaacagcacagtaactcatcttgtt
atccccgacgttccaatgccaagcaccgtcaaatgtttgatggctgttctgactggatgt
tgggtcctcaagtttgaatgggtacgagcctgtctgcaaagtacagtccgagaacaagaa
gagaagtatgaaatccaaggtggcccacaaagaagccggctcaacagagaacagctgctg
ccgaagttgtttgatggatgctacttctattttctgggatctttcagtagtcaccagaag
agtgatcttgtggagttggtcaaagcagcaggaggccaaattctggttaggcagccaaaa
ccagacagtgatgtgacgcagatgatcaacacggtggcataccatgcagaatcgacttct
gaccagcgattttgtactcagtatgtcatctatgatgtgtcttctaaattcaagccagag
aaaattcgtcagggcaaagtctggatggccccctccagctggattatagactgtgtaatg
tcatttcagctgttgcctgtaaagtga
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