Cygnus atratus (black swan): 118243115
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Entry
118243115 CDS
T09349
Symbol
CLASP1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cata03036
]
118243115 (CLASP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cata04812
]
118243115 (CLASP1)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
118243115 (CLASP1)
Cytoskeleton proteins [BR:
cata04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
118243115 (CLASP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
TOR1L1_N
HEAT_2
Cnd1
Sec7-like_HUS
Adaptin_N
HEAT_DAAF5
RTP1_C1
PDS5
ParcG
MMS19_N
MMS19_C
TPR_20
KH_DEAH11_1st
TAN
Motif
Other DBs
NCBI-GeneID:
118243115
NCBI-ProteinID:
XP_035392750
LinkDB
All DBs
Position
6:26097543..26262211
Genome browser
AA seq
1465 aa
AA seq
DB search
MEPSMEYCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKMVDGLATSWVN
SSNYKVVLLGIDILSALVSRLQDRFKAQIGTVLPSLLDRLGDSKDSVREQDQTLLLKIMD
QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQSLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSSGDKN
FDDEDSVDGNRPSSASSSTSSKAPANSRRVGMGTTRRLGSAPLGSKSSTAKEGAGAVDEE
DFIKAFEDVPTVQIYSSRDLEESINKIREILSDDKHDWEQRVSALKKIRSLLLAGAAEYD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKVMATSGVVAVRLIIRHTHIPRLIPIITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTPGSLQRSRS
DVDVNAAASAKSKVTSSGASTPFSSAAALPPGSYASLGRIRTRRQSSGSATSVTSTPADT
RGRSRAKVVSQSQPGSRSSSPGKLLGSAYGGLSGGTSRVQPVPSSSEKRSKIPRSQGCSR
ETSPNRIGLDRFGLGQPGRMPASVNAMRVLSTSTDLEAAVADALLLGDSRSKKKPVRRRY
EPYGMYSDDDANSDASSACSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGL
IGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDWL
FVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKV
AILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTP
EFTMLLGALPKTFQDGATKLLHNHLKNSSNTSVGSPSNTLGRTPSRHSSSRTSPLTSPTN
CSHGGLSPSMLDYDTENLNSDEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKDCDIV
SRDGGLAVPTSDVRGSSDIVEGGRMALDNKTSLLNTQPPRAFSGPRAREYNPYPYSDTIN
TYDKTALKEAVFDDDMDQLRDEVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITR
EDNLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAELTIMKTL
EAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVIERI
SKESLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHLAQLTGSKMKL
LNLYIKRAQTTNSNSSSSSDVSTHS
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atggagcccagtatggagtactgcctagcgcaggtgctgcagaaggatgttgggaagagg
cttcaggtcggccaggagctgatagattacttctcagataaacagaagtcagctgatctc
gaacacgatcagactatgctggataaaatggttgatggactggccacctcttgggtcaat
tccagcaattacaaggtggtcctcctgggcatcgacatcctctccgccctggtgtcgcgc
ctgcaggaccgcttcaaggcccagatcggcacagtgctgccaagtttgctcgacaggctg
ggagactccaaagactcggtgagggagcaggatcagaccttgctgctgaaaatcatggat
caagctgctaacccgcagtacgtgtgggataggatgctaggaggattcaaacacaagaat
ttccggacgagagaagggatctgcctctgccttattgcaacactcaatgcatctggagct
cagagcttaacgctgagtaagatagtgccacacatctgtaacttacttggagatcccaac
agccaggttcgagatgcagcaataaacagccttgtggagatctacagacacgtcggtgaa
cgtgtaagggctgatctcagtaaaaaaggattaccccagtctcggttgaatgtaattttt
acaaaattcgacgaggtccagaaatctggaaacatgatccagagttcaggggataaaaat
tttgatgatgaagactctgtggatgggaacagaccttcctctgctagctcctctacatct
tcaaaggcccctgcaaactcacgtagggttgggatggggactacccgcagacttgggtct
gcgcctctgggatccaagtcctcaacagccaaagagggagcaggtgctgtggatgaagaa
gacttcattaaggcatttgaagatgtcccaacagttcagatttattctagccgggatctt
gaggaatccataaacaaaataagagagatactatcagatgacaagcatgactgggaacaa
agagtatctgctttgaaaaagatccgctccttactcttggctggagctgcagaatatgat
aacttcttccaacacttgcgactcttggatggagcatttaaattatctgctaaagacctg
cggtctcaggtagtgcgagaggcttgtatcaccttgggacatttgtcatcagttctggga
aacaagtttgaccatggggcagaagccattatgccaacaatttttaatctaattccaaat
agtgccaaagtcatggccacttctggtgttgtagcagttaggttaatcattcgacatacg
cacatccctcgactaatacccatcataactagtaattgtacctccaagtctgtcgcagtt
agaaggcgctgttttgagtttctagacctgctgctgcaggagtggcaaactcactcccta
gaaagacacatatcagtgttagctgaaacgataaagaagggaattcacgatgcagactct
gaagccaggatagaggcaagaaagtgttactggggtttccacagtcacttcagccgagag
gcagagcatttgtaccacactctggagtcctcctaccagaaggccctgcagtcgcatttg
aagaactctgacagcattgtgtccttgccacaatcggatcgctcctcctccagctcccag
gagagtctcaaccgtccattgtctgccaaaagaagtcctactggaagtactacatctaga
gcatctacagtaagtacaaaatctgtgtcaacaccaggatctctgcagcggtcccgcagt
gacgttgatgtgaatgcagcagctagtgccaagtcgaaagtgacatcttctggagcatct
acccccttcagttctgctgcagccttgcccccaggctcatatgcatcactaggtcggatt
cgtacaaggagacagagctctggcagtgccacaagtgtcacctcaacacctgctgatacc
cgaggccgcagccgggctaaagtggtttcccagtcccaacctggtagccggtctagttct
ccgggtaagctgttaggaagcgcctatggtggcttgagtggtggaacatccagagttcag
ccagtgccatcatcttcagagaagcgcagcaagatccctcggagccagggatgcagtcga
gagacaagtcccaacagaataggactagaccggtttggactcggacagccaggcaggatg
cctgcttctgtgaatgccatgcgagtcctgagcacaagcacagatctggaggctgctgtg
gctgatgcactgctgttaggagactccaggagcaagaaaaagcccgtgagaagaagatat
gaaccctatgggatgtactcagatgatgacgctaacagtgatgcatcaagtgcttgctcc
gagcgctcctatggttccaggaatgggggcattccacactacctgcggcagactgaagat
gtggctgaggtcctgaaccactgtgccagctccaactggtctgaaaggaaggaggggctc
ataggtcttcagaacttactgaaaagccagcggacgctgagccgagtcgagttaaaaagg
ctttgtgaaatatttactcgcatgtttgctgaccctcacagcaagagagtcttcagcatg
tttctggaaaccctggttgatttcatcatcattcataaagatgacttgcaggattggctt
tttgttctcctgacacagttgctaaagaaaatgggagcggatttgctggggtctgtgcaa
gcaaaagttcaaaaagctctggatgttaccagggattcttttccatttgatcaacaattt
aacattttgatgaggtttattgtggatcagacccaaacaccaaacctcaaggtgaaagtt
gctatcctgaagtatattgagtccttggcaagacagatggatccaacagactttgtgaac
tccagtgagacaagacttgctgtatctagaattataacttggacaacagaaccaaagagc
tcagatgtgagaaaggcagcgcaaatagttctgatttccctcttcgaactgaacactcct
gagtttaccatgttacttggtgccttgccaaaaacattccaggacggtgctaccaagctc
ctgcacaaccacctcaagaactccagtaacaccagtgtgggttctcccagcaataccctt
ggtcggactccttcccggcactccagcagcagaaccagccccttaacttcacctaccaac
tgttcccatggtgggctgtctccaagtatgctggattatgacacggagaacctaaattct
gatgaaatctacagctctcttcgtggagtcacagaagcgattgaaaaatttagtttccgt
agtcaagaggatctgaatgagccaatcaaacgtgatggaaagaaagactgtgacattgtg
tctcgagatggtggccttgcggtacctactagtgatgtccgtggaagtagtgacattgta
gagggaggaaggatggctctcgataacaaaacctccttactgaacacccagcctccacgc
gccttttcagggccacgtgctcgagagtataacccctatccttattccgacacaattaac
acttacgacaagactgccctcaaggaagcagtgtttgatgatgacatggatcagcttcgg
gatgaagtacccattgaccattcggatttggtggctgacctcctgaaagagctctctaac
cacaatgaacgggtggaggagcgaaaaggagctctcctggaacttctaaagatcacaagg
gaggataacctcggagtttgggaggaacatttcaaaaccattttgctcctgctgctggaa
acacttggagacaaagatcattcaataagagccctggcactgcgagtccttagagagatc
ttacggaatcagccagcaaggtttaaaaactacgcggagctgaccatcatgaagacactg
gaagcccataaggattcccacaaggaggtcgtcagagctgctgaggaagctgcttccacc
ctggcaagctccatccaccctgagcagtgcatcaaggtgctttgccccatcattcagact
gcagattatccaatcaatttagctgccatcaaaatgcagacgaaagttattgagaggatt
tccaaggaatcattgcatcaactccttcctgatatcattcctggattgttacagggttac
gataacacagagagcagcgtccgtaaagctagtgtattttgcctagtggcaatttactca
gtaattggagaagaactgaaacctcatctcgcacaactcacaggaagcaagatgaaacta
ctaaacttgtacataaagagggcccagaccaccaacagcaacagcagttcctcttcagac
gtttcaacgcacagttaa
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integrated database retrieval system
