Cygnus atratus (black swan): 118243172
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Entry
118243172 CDS
T09349
Symbol
DYNC1I2
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04145
Phagosome
cata04814
Motor proteins
cata05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118243172 (DYNC1I2)
09142 Cell motility
04814 Motor proteins
118243172 (DYNC1I2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118243172 (DYNC1I2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cata03036
]
118243172 (DYNC1I2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cata04812
]
118243172 (DYNC1I2)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
118243172 (DYNC1I2)
Cytoskeleton proteins [BR:
cata04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
118243172 (DYNC1I2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_EML
WD40
Dynein_IC2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Beta-prop_SPT8
WD40_RFWD3
Nbas_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
118243172
NCBI-ProteinID:
XP_035392925
LinkDB
All DBs
Position
6:complement(19227960..19255889)
Genome browser
AA seq
609 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKDVLPVQEESDLEKKRREAE
ALLQSMGLTPESPVVPPPTSPSSKSVSTPSEAGSQDSGDGAVGSRRGPVKLGMAKITQVD
FPPREIVTYTKETQTPVMTQPKEDEEDEDDVVAPKQLVEPEEEKTLKKEEEEEAAPHELT
EEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYSGRDLEDKEGEIQAGAKLSLNR
QFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPHEPDGVALVWNMKYKKTTPEYVF
HCQSAVMSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNV
VGTQNAHNLISISTDGKICSWSLDMLSQPQDSMELVHKQSKAVAVTCMSFPIGDVNNFVV
GSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHAAVGPVDFSHLFVTSSFDWTVKLW
TTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGMGRLDLWNLNNDTEVPTASITVEG
NPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAIPRSDEWTRFGRTLAEINANRADAE
EEAATRIPA
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagtgaactgaaggcggagttggagcgcaagaagcaacgattagctcag
atcagagaggaaaagaaaagaaaagaggaagagagaaagaagaaagaaactgatcagaag
aaagatgttcttcctgtacaagaagaatctgatcttgaaaagaagagaagagaagctgaa
gcattacttcagagcatggggctgacacctgaatctcccgttgtccctcctcctacctct
ccgtcttccaaatctgtgagtacgccaagtgaggctggaagccaggactctggtgatggc
gctgttggatctagacgtggacctgttaaacttggaatggccaaaattacacaagttgac
tttcctcctcgagaaattgttacatatacaaaggagacacaaacaccggttatgactcag
ccaaaggaagatgaggaagatgaagatgatgtggttgcaccaaagcaattagttgaacct
gaggaagaaaaaacattaaaaaaggaggaggaggaggaagctgcccctcatgagcttacg
gaggaagaaaaacaacaaattttgcattctgaagaatttttaagtttctttgaccactct
acgaggattgttgaaagagccctttctgagcaaatcaatattttctttgactacagtgga
agagacttagaagacaaagaaggagagattcaagcaggagcaaagctatccttaaacagg
cagttttttgatgaacgttggtcaaagcatcgtgttgtcagttgtttggactggtcgtct
cagtacccagaattacttgtagcctcttacaacaacaatgaggatgcacctcatgagcct
gatggagtggcccttgtgtggaatatgaagtacaagaaaactaccccagagtatgtcttt
cactgccagtcagcagtgatgtcagctacatttgcaaaatttcatcccaatttggtggtt
ggtggcacatactcaggccaaatagtgctatgggataatcgcagcaataagagaacccca
gtgcagagaactccgctttcagctgctgctcacacgcacccagtgtactgtgtaaatgtt
gttgggacccagaatgctcataacctgatcagtatctcaaccgatgggaagatatgctct
tggagtttagacatgctttcccagccacaggatagcatggagctggttcacaaacagtcc
aaggctgtggctgttacttgcatgtccttccccattggagatgtcaacaactttgttgtt
ggaagtgaagaaggctcagtctacactgcatgccgccatggcagcaaagctggaatcagt
gagatgtttgaaggacaccagggaccaatcacaggtattcattgccatgcagcagttgga
cctgtagacttctcgcatctctttgtcacttcttcttttgactggacagtaaagctttgg
acaactaagaataacaaacctctctactcatttgaagacaactcagactatgtttatgat
gttatgtggtctccaactcaccctgccttgtttgcctgtgtggatgggatgggcaggctt
gacctgtggaatctcaacaatgacactgaggtgccaactgcgagcattactgtggagggc
aatcctgctctgaaccgtgtgagatggacacactctgggagagagattgctgtaggtgat
tcagagggacaaatagttatatacgatgtgggagagcaaattgccattcctcgcagcgat
gagtggactcgatttggtcgaacgctggcagaaataaatgccaacagagctgatgcggaa
gaggaagctgcaacccgcataccagcatag
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integrated database retrieval system
