KEGG   Cygnus atratus (black swan): 118243261
Entry
118243261         CDS       T09349                                 
Symbol
KDM4A
Name
(RefSeq) lysine-specific demethylase 4A
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
cata  Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:cata00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cata03036]
    118243261 (KDM4A)
Enzymes [BR:cata01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     118243261 (KDM4A)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     118243261 (KDM4A)
Chromosome and associated proteins [BR:cata03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    118243261 (KDM4A)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 JmjN zf-HC5HC2H PHD DUF7141 LBR_tudor DUF4537 Rad9_Rad53_bind Tudor_5 SLX1_C
Other DBs
NCBI-GeneID: 118243261
NCBI-ProteinID: XP_050568117
LinkDB
Position
8:21776791..21800151
AA seq 1059 aa
MASELEGPNPGARIMTFRPSMEQFRDFSRYIAYVEAQGAHRAGLAKIVPPKEWRPRRCYD
DIDELVIPAPIQQVVTGQSGLFTQYNIQKKAMTVREFRRIANSDKYCTPRYTDFEDLERK
YWKNLTFNAPIYGADVNGTLYEKHVDAWNIGRLNTILDIVENESGITIEGVNTPYLYFGM
WKTSFAWHTEDMDLYSINYLHFGEPKSWYSIPPEHGKRLERLAKGFFPGSAQSCEAFLRH
KMTLISPSILKKYGIPFDKVTQEAGEFMITFPYSYHAGFNHGFNCAESTNFATLRWIEYG
KQSVLCSCRKDMVKISMDVFVRKYQPDRYKLWKAGKDVTVIDHTLPTPEAAEFLKGDLMQ
KVKSGKQYAEEMETGETCKEEEDGDEAKSVPKHRIGTKRHRVCLEVPQEVSESEAFPKEE
LSSAQDEADTAQPCEIPTSEHGQQGEQGCKLPDCGGLAKFEELKAVKLEEEEEEEQEAAA
LDLSISHASNSTSVLPTSKQSATCSIQPSSPAYSGSSDSESTDLLPKRTVPGPAGVLTVH
SYAKGDASGSDSEQTSGKKTSATASMNEQELAEAAKEYIRSMKESKKSKGRRQPLSKLPR
HHPLLVKDCISDDEASEQLTPEEEAEETEAWAKPLSQLWQNRPPNFEAEKEYNRTMAQQS
PYCAVCMLFQTYQAECGGNSQSSGVTPGAADGKIRTKPLIPEMCFTTTGCSTDLNLSTPY
LEEDGTSVLITCRNCQVCVHASCYGVPPDKATEDWMCSRCTENALEEDCCLCSLRGGALQ
RANDDKWVHVMCAVAVLEAKFVNIAERSPVDVGKIPLQRFRLKCIFCKKRRKRIAGCCVQ
CSHGRCPTSFHVSCAQAAGVMMQPDDWPFVVFITCFRHKIPSQAERAKAALQDLSPGQIV
ISKHKNGRFYQCEVVSLAKETFYEVNFDDGSFSDNLYPEDIVSRDCLQLGPPAEGEVVQV
RWTDGQVYGAKFVASHAIQMYQVEFEDGSQLMVKRDDVYTLDEELPKRVKSRLSIASDMR
FTEIFAEKEVRQERKRQRVINSRYREDYIEPALYRAIME
NT seq 3180 nt   +upstreamnt  +downstreamnt
atggcctcggagctggagggccccaaccccggcgcgcggatcatgaccttccggcccagc
atggagcagttccgcgacttcagccgctacatcgcctacgtggaggcgcagggagcgcac
cgcgccgggctggccaagatcgtgccccccaaggagtggaggccgcggcggtgctacgac
gacatcgacgagctggtgatcccggcgcccatccagcaggtggtgacggggcagtccggc
ctcttcacgcagtacaacatccagaagaaggccatgacggtgcgcgagttccgcaggatc
gccaacagcgacaagtactgcacaccccgctacacggacttcgaagaccttgaacgaaag
tactggaagaaccttacgttcaatgcccccatctacggtgctgatgttaatggcacgctt
tatgagaagcacgtagatgcgtggaatattggcagattgaacacaatcctggatattgtg
gagaatgaaagtggcataaccatcgaaggagtgaatactccttacctctattttggcatg
tggaaaacttcatttgcgtggcatactgaagacatggatctctacagtattaattacttg
cattttggggaacccaagtcatggtactctatccctccagagcatgggaagcggctggag
agacttgccaaaggattctttccgggaagtgcccagagctgtgaagcgtttctccgtcac
aagatgaccctgatctctccatcaatactgaagaaatatggcatcccttttgataaggtg
acgcaggaagctggagagttcatgataacctttccttatagttatcatgctggctttaat
catggatttaactgtgctgaatctaccaactttgctactcttcggtggattgagtatggg
aagcagtctgtactgtgctcgtgccggaaggacatggtgaagatctccatggatgtgttt
gtgaggaagtaccagccggaccgttacaagctctggaaggccgggaaggacgtgactgtc
attgaccatactcttccaacacccgaagcagcggagttccttaaaggggatcttatgcaa
aaagtcaagagtgggaagcagtatgctgaggaaatggaaacaggagaaacgtgtaaagag
gaggaggatggggatgaggcaaaaagtgtgcccaagcatcgcataggaaccaaaaggcac
cgagtctgcctggaagtacctcaggaagtgagtgagagcgaggccttccccaaggaggag
ctgagctctgcgcaggatgaagcagacacggcacagccttgtgagatacccacaagtgaa
cacgggcagcagggtgaacaagggtgcaagcttccagattgtgggggcttggccaaattt
gaagaactgaaagctgtgaagcttgaggaggaagaagaggaagagcaagaagcagctgcg
ttggacctctccatttcgcatgcttcaaattccacttcagttttgccgacttcgaagcag
agtgcaacttgcagcattcagcccagctcgccagcgtattctggttcttcagactctgaa
tcgactgatctgttgccaaaaagaactgtacctgggccagctggggtgcttacagtccat
agctacgctaaaggggatgcaagtggatctgacagtgaacagacttcaggaaagaaaacc
agtgctactgccagcatgaatgaacaagaactggcagaggcagcaaaggagtacataaga
tcaatgaaggagagtaagaagtccaagggtcgtcgccagccattgagcaagctcccccgc
catcacccgctcttggttaaagactgcattagtgatgacgaggcatcggagcaactgact
cctgaagaagaagctgaagagacagaagcttgggccaagccacttagccagctgtggcag
aatcggccaccaaattttgaggctgaaaaggaatacaaccggaccatggcccagcagtct
ccttactgtgctgtttgtatgctcttccagacgtatcaggcagagtgtggaggcaacagt
caaagctctggagtaactccaggtgctgcggatgggaagatccgaaccaaacccctgatt
cctgaaatgtgcttcactacaactggctgcagcactgatctcaatctttcaaccccctac
ttagaggaagatggaaccagtgtactcatcacctgcaggaactgccaagtctgcgttcat
gcaagttgttatggtgtaccccctgacaaggccactgaagactggatgtgctccaggtgc
acagaaaacgccttagaagaggactgctgtttgtgttcattacgaggaggagctctgcag
agagccaatgatgacaagtgggttcacgtaatgtgtgctgtagctgtactggaggcaaaa
tttgtgaacatcgcagagcgcagtcctgtagatgttggcaaaatccccctgcaacgtttc
agactgaaatgcatcttctgcaaaaaacgaagaaagagaattgcaggttgctgtgtacag
tgctcccacggtcggtgtcccacgtcctttcatgtcagctgtgcccaagcagcaggagtc
atgatgcagcctgatgactggccgtttgttgtcttcattacctgcttcaggcataagatc
ccatctcaggcagagcgagctaaggccgcgctccaagatctgtcacctggacagatagtc
atcagcaagcacaagaatggtcgcttctatcagtgcgaagtggtcagccttgcgaaggag
actttctatgaggtcaactttgatgatggctccttcagcgacaacctgtatccagaagac
attgtgagtcgagactgccttcagttaggtcctcctgctgaaggtgaagttgtgcaggtc
agatggacagatggacaggtttatggagccaagtttgtcgcatcacatgccatccagatg
taccaggtggaatttgaagatggatcacagctgatggtgaaaagggatgatgtgtacact
ctggatgaggagcttcctaagagagtcaagtcaaggctgtcaatagcttccgatatgcgc
ttcacagagatctttgcagagaaggaggtcagacaagagaggaagagacaaagagtgatc
aattcacgctaccgggaagattacattgaacccgcattgtaccgggccatcatggagtaa

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