Cygnus atratus (black swan): 118243299
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Entry
118243299 CDS
T09349
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cata03016
]
118243299 (TRMT13)
Enzymes [BR:
cata01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
118243299 (TRMT13)
Transfer RNA biogenesis [BR:
cata03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
118243299 (TRMT13)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
OrgC
Methyltransf_32
DUF7077
Nup54
Motif
Other DBs
NCBI-GeneID:
118243299
NCBI-ProteinID:
XP_035393121
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All DBs
Position
8:3284246..3291554
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AA seq
453 aa
AA seq
DB search
MAAPQPEPGRCAYFVARKKRFCRMVPALGKRFCGEHGHQEKENDRKRIPCPLDPKHTVYE
DQLQKHLKKCNSREKPKPVYFVQDINAGFKDVAEIPEKQVTLSSLSKEELENLIIKLKKA
SNGLELDLKEQILSHKALHEALNDPKNGESAFKHLKQQASILGNMEKLHLLGPGRCFIEF
GAGRGKLSHWVDVALQDVEDTQFLLVERATTRFKVDGKHKKRDSVFERLQVDIQHLCLNK
VPSLEKKRLPVVGIGKHLCGAATDLALRCLVESYATCCGGENEEPAAKRPKNKTEVAVKS
SADNERNKDDFKPVAGIVIALCCHHKCDWTHYVGREFFKSVGLGPVEFHYFQRMSSWATC
GMRETITSTSEDHTNNTEEHDQPYSKTESDFDTLQGLPVEERKEIGALCKLLIDHGRIRY
LQQRGYRAALHHYTESAISLENVLLTAVPEPTT
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgcagccggaaccgggtcggtgcgcgtacttcgtagcgaggaagaagcgc
ttctgcaggatggtcccggctctcgggaagcgcttttgcggggagcacgggcaccaggag
aaagaaaatgacagaaaaagaattccatgtcctcttgatccaaaacacactgtatatgaa
gaccagctacaaaaacatttgaaaaaatgcaattcaagagagaagccaaaaccagtctac
tttgttcaagatattaacgcaggttttaaagatgtagcagaaataccagaaaaacaagta
acactctcttccctatccaaagaagagctagagaatttaattatcaagttgaaaaaagca
agtaatggtctggaactcgaccttaaggaacaaatactgtctcacaaggctttacatgaa
gccttaaatgacccaaagaatggggaatctgcttttaaacatttgaaacaacaggcttcc
attttaggtaacatggaaaaattacatttgcttggtccaggaagatgctttattgaattt
ggagctgggcgaggaaagctgtctcattgggttgatgttgccttacaggatgttgaagat
actcaatttttgcttgtggaaagggcaactacaagattcaaggtggatggaaaacataaa
aagagagattctgtatttgaaaggctccaagttgatattcagcacttatgtttaaataag
gtacctagtttagagaagaaaagactacctgtggtaggaattgggaaacatttgtgtggg
gctgccacagatctcgctttgagatgtttggttgaaagctatgcaacttgctgtggagga
gaaaatgaagagcctgcagcaaaacgtcctaagaataagacggaagtggctgttaagagt
tcagctgataatgaaaggaacaaagatgactttaagcctgtagctggaattgttattgca
ctatgttgccatcacaaatgtgactggacacactatgtaggcagagagttcttcaaatca
gtaggacttggaccagtagaatttcattattttcagagaatgagtagctgggccacttgt
ggcatgcgagaaaccataacctctactagtgaagatcacactaacaacacagaagaacat
gaccaaccatacagcaaaacagagagtgattttgacactctgcaagggctaccagttgaa
gagcgaaaggagattggtgccctctgtaaactgctgattgatcatggacggatcagatat
ttacaacaacgaggatacagggctgcactacaccattacacagagtctgctatatccttg
gagaacgtcctgttgacagctgtcccagagccaactacatga
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