Cygnus atratus (black swan): 118243417
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Entry
118243417 CDS
T09349
Symbol
SEC16B
Name
(RefSeq) protein transport protein Sec16B
KO
K20353
COPII coat assembly protein SEC16
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118243417 (SEC16B)
Membrane trafficking [BR:
cata04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
118243417 (SEC16B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
118243417
NCBI-ProteinID:
XP_050568305
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Position
8:11996655..12011872
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AA seq
1090 aa
AA seq
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MMKSSCGTERRAFILPCPSSLLAWARRFPGLHFLQAGGTAERCRCWFLFETFNSAEAERL
FLGITREQFYCPGGRGSLGAWRQQQQQHRPGWTRAEELLPFVPCGGSGLWQRRLGSGRRA
PAASQQASEAPRIFRMEPWAPLRPPLPRQGHAARGEKWAVWAEGHHGPPPWWPVLHVGPP
PRPGSWEQGHPPGRDTRRPASRAESYESSHPLRPYSRQGHEDPHWQYPAATYGDNHAYQS
HQRQPVAWQGDRDVRQSEPYGKSRAYRDQHYHRGYHPNLATSPPGQDRSQSYDVYKEGSR
RSWAGGEASGQPREPSLLLQYRESGLSSSGYELSQYIRDGADHCDTAFSESWSPAQGGGP
SVSGLLAPPKFSLPHRAVCFGAGGQLVLVCPHSPAEGQRPLVELHSLEVILQGTKEQEEL
QAFPGPLAREDLHKVDVMTFCQQKIATSCDLSTQRGRDSALLWKLLVLLCRQNGSMVGSD
VAELLMQDRRHQEKYKRQNPMENPTSLAEDEWRQPGTLDLITGEVPPVVETQAQIVEKFT
KLLYYGRRKDALLWAMRNQLWGHALFLSSKMDPRTYSWVLTGFTSTLATNDPLQTLFQLM
SGRIPQVAQSCGDAKWGDWRPHLAVLLSNKVGDMELNHRAIITMGDSLAGRGAVEAAHFC
YLMADIPFSYFGAKADRMALLGSSHRQAFAQFASTEAIQRMEIFEYCQQLRRPKSFLLPF
QVYKLLYASRLADHGLPAHALNYCEHIATVLLGQDPASHPVLAQQLVKLAERLKLCDPLL
LEMPEQDQALEPEWLLQLRAHCQHWETEDDLTPEVALTQPELSWAAVSTPGGEPNHELPP
SDGYQQELWHQPVPPMPPQGPSPHQDVSIQPLAPAEVAALGMGPATSPGGLSSEPSPQVV
PPAGDAGEPQDAHEVQQPGLQCQQGLSTRARSVSESSTISQEEGSQPSSDSALEEPAAEV
TPGEDKSSGFRWFGWFRSKPTMEASPKATSAADCPTPEPQERMSPSPPDTAPAAGMSPSA
SPLPTSRNPVSIDMKGPWAMDSHKAGDQPGSNQPPLGTIPLFNPAEISQLTAARPSQPRL
LSQRRYPNPL
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagagcagctgtggaactgaaaggagagccttcattctgccctgcccaagcagc
ttgttggcctgggcgcgacgcttccctggtttgcatttcctccaggctggtggcacggct
gagcgatgcagatgttggtttttatttgaaaccttcaattctgcagaggctgagcgctta
tttcttgggatcaccagggaacagttctattgtcccggtgggaggggatccctgggggcc
tggcgtcagcagcagcagcagcaccgacctggctggacccgggcggaggagctgctgccc
tttgtcccctgtggtggcagtggactttggcagcggcgcctggggagcggaagaagggcc
ccagcggcctcccagcaggcctccgaagcccctcggatcttccggatggagccctgggcc
cccctgaggccgcccctgcctcggcagggtcatgcagcccggggtgagaagtgggctgtg
tgggcagagggccaccacgggccacctccctggtggcctgtcctccacgtgggtcccccg
cctcgtcccggctcctgggagcagggccacccccccggcagggacacgcgccgcccggca
tcccgggcagagagctacgagagcagccaccccctcaggccctactccaggcaaggacat
gaagacccccactggcagtacccagcagccacctatggggacaaccacgcttaccaaagc
caccagcggcagcctgtggcctggcagggtgacagagacgtgagacagagcgagccctac
ggcaagagcagggcctaccgggaccagcactaccacaggggctaccatcccaacctggcc
accagcccacctgggcaggacaggtcccagagctacgacgtgtacaaggagggctccagg
cggtcatgggcagggggggaggccagtggccagccccgagagcccagcctgctcctgcag
taccgcgagtcggggctcagctccagtggctacgagctcagccagtacatccgcgacgga
gccgaccactgcgacaccgcgttttcggagagctggagcccagcgcagggaggggggccc
tcggtgtccggcctgctggcaccccccaagttctcgctgccgcacagggcggtgtgcttt
ggggctggagggcagctggtgctggtgtgtccccacagccctgctgaggggcagaggccc
ctggtcgagctgcacagcctggaggtaatccttcaaggcacaaaagagcaggaggagctg
caggccttcccagggccactggccagggaagatctgcacaaggtggatgtgatgacattt
tgccagcagaagatagccacaagctgtgatctctcaacacaaagaggcagagattcagct
cttctctggaaactcctggtcctcctctgccggcagaacgggtccatggtgggctcagac
gtggccgagctgctgatgcaagaccgcaggcaccaggagaagtacaagaggcaaaacccc
atggagaacccaaccagcctggcggaggatgagtggcgccagccggggacgctggacctc
attacaggagaagtccctcccgtcgtggagacgcaggcgcagatagtggagaagttcacc
aagctcctctactacggcagaaggaaagacgccctgctctgggccatgagaaaccagctg
tggggccatgctctcttcctctccagcaagatggacccgcggacctacagctgggtgctc
actgggttcaccagcacactggccaccaatgacccgctgcagaccctcttccagctcatg
tcgggaaggatcccacaggtggcacagagctgcggggatgccaagtggggagactggagg
ccccacctggccgtgctgctgtccaacaaggtgggagacatggagctgaaccaccgggcc
atcatcaccatgggggacagcttggctggccggggagccgtggaagcagctcacttctgc
tacctgatggcagatattcctttcagttacttcggggcgaaagcagaccgcatggcgctg
ctgggcagcagccaccggcaggcatttgcccagttcgccagcacggaggccatccagcgc
atggaaatcttcgagtattgccagcagctgcggcggcccaaatccttcctgctccccttc
caggtgtacaagctcctctatgcctctcgcctggccgaccacgggctcccagcccacgcc
ctgaactactgcgagcacatcgccaccgtgctcctgggacaggatccggccagccacccc
gtcctggcccagcagctggtgaagctggccgagcggctgaagctctgtgacccgctgctg
ctggagatgcctgaacaggaccaggcgctggagccagagtggctgctgcagctccgagcc
cactgccagcactgggagacggaggacgacctcactccagaagtagcactgacccagccg
gagctctcctgggctgctgtgtccaccccaggcggagagcccaaccatgagctacccccg
agcgatggctaccagcaggagctgtggcaccagcctgtcccccctatgccaccacaggga
cccagtccccaccaggatgtgtccatccagcccctggcacctgctgaagttgcagcactg
ggcatgggaccggccacctctccaggaggactttcctctgagccctctccacaggtggtg
ccaccagcaggagatgctggagagccccaagacgcccatgaggtgcagcaacctggtctc
caatgccagcaggggttaagcacaagagctcgctcggtctcggagagctcgaccatctcc
caggaggaaggcagccagccatcctcggacagcgcactcgaggagccagcagcggaggtg
acgccgggtgaggacaagagctctggattcaggtggtttggctggtttcggtcgaagccc
actatggaagcctctcccaaagccacgtctgctgcagactgccccacaccagaaccacag
gaacggatgtcgccatccccacctgacactgctcctgcggctgggatgagtccttcagcc
tccccattgcctacctccagaaaccccgtgtccattgacatgaagggcccgtgggctatg
gacagtcacaaggctggagatcagcccggctccaaccaaccaccgctggggacaatcccg
cttttcaaccctgccgagatctcccagctcaccgccgcccgacccagccaacccaggctg
ctctcccagcgccgctaccccaaccctttgtga
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