Cygnus atratus (black swan): 118243472
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Entry
118243472 CDS
T09349
Symbol
NOTCH2
Name
(RefSeq) neurogenic locus notch homolog protein 2 isoform X1
KO
K20994
Notch 2
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118243472 (NOTCH2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
NOD
Notch
NODP
Ank_5
EGF_3
Ank_3
Ank_4
EGF_Teneurin
cEGF
Motif
Other DBs
NCBI-GeneID:
118243472
NCBI-ProteinID:
XP_035393416
LinkDB
All DBs
Position
8:9155314..9240915
Genome browser
AA seq
2432 aa
AA seq
DB search
MARGAGPALAALLGTVLAVFSRAEPAAALQCMDDSKPCVNEGRCIPYQNGTGYCKCREGF
LGDYCQYRNPCESNTCKNGGTCEMTSLIGKATCKCAPGFTGEDCQYSESHICYVSQPCLN
GGTCHPHSQETYECVCPPGYTGKDCQWIDACTSQPCANGSTCTVSGNKFSCICLSGYTGQ
KCEIDVNECATSGLCQHGGTCVNVPGSYRCQCKPGYTGHRCESTYVPCSPSPCMNGGTCH
QTSDFTFECNCLPGFEGSICERNVDDCPNHNCQNGGICVDGVNTYNCRCPPQWTGQFCTE
DVDECQLQPNACQNGGTCTNHNGGYACVCVNGWSGDDCSKNIDDCFTASCANGSTCIDRV
ASFSCICPEGKAGLLCHLDDACVSNPCQKGALCDTNPVNGHYICTCPQGHKGADCTEDVD
ECAMANSNPCEHAGKCVNTEGSFHCECLKGYTGPRCEMDINECHSNPCQNDATCLDKIGG
FTCLCMPGFKGVHCEEDIDECLSNPCVNNGECLDKVNRFLCVCPPGFSGAVCQIDIDDCS
STPCLNGAKCIDHPNGYECQCATGFTGILCEENINNCDPDPCHHGECQDGIDSYTCICNP
GYMGAICSEQIDECHSNPCLHQGRCIDLVNGYQCNCLLGTSGVNCENNFDDCASNPCIHG
DCIDGINRYNCACKPGYTGPRCNVDIDECASNPCHNGGTCINEVNGFRCVCPEGYHHPHC
QSQADGCLSNPCVHGNCTHIVSGYKCVCDPGWIGDYCSTEGNECKSNPCQNGGTCEDLLN
GYRCTCRKGFKGVNCQVVVAPCSPDPCENSGICQESPDSEGYTCQCAPGWEGERCTLDID
ECLSKPCKNHALCHNIQGSYLCECRPGFTGGDCDSNIDDCLSNPCQNGASCVDGINSFSC
ICLPGFHGDKCQTDTNECLSEPCRNGGTCTHYVNSYTCKCQPGFEGTNCENNIDECTESS
CFNGGTCVDGINSFTCQCPVGFTGPFCLMEINECDSHPCLNKGSCVDSLGTYRCICPLGY
TGKNCQTPMDLCSRSPCKNKGTCLQTGAQTRCVCPSGWTGAYCDVPNVSCQVAASQRGVT
VDQLCQHSGHCLNVGNTHRCQCRVGYTGSYCEEQLDECDSSPCQNGATCRDHLGGYQCEC
VPGYQGVNCEYEVDECQFQPCQNGGTCIDLVNHFKCSCPPGTRGRFCEENVDDCVSDSGV
PRCFNGGQCIDQIGGYSCVCLPGFAGERCEGDINECLSNPCNPRGSLDCVQLINDYTCIC
RSAFTGRHCESVIDVCPRKPCQNGGTCAVASNMPDGFICQCPPGYSGAKCEFSSHSTCGQ
VKCKKGEQCIQTSSGPRCYCPKLSVGEECQTNTGCASAPCQNGGSCHPRSQPPYYYCQCP
DHAQGSQCEQLTHPSQEPLGCLDSQCAEKAKDGYCDEDCNTHACQWDGGDCSLTMEDPWA
NCSSSLRCWMLFNGQCDEFCNTPECLFDNFECQQNSKTCKYDKYCADHYADGRCDQGCNS
EECGWDGLDCAGDKAEKLAEGTLIIVVLMPPDELLGDVRSFLRTLGTLLHTNLRIKLDSQ
GNPMVFPYYGEKSAARSRRSLVVIRKHRELEQEVIGTRVFLEIDNRQCAEDSEQCFQNTE
AAAALLAAQAIKGMLPYPFVSVQSEPLLPPKTQLLYLLAVAALIILLILLLGVMMAKRKR
KHGSLWLPEGFILRRDPSNHKRREPVGEDAVGLKNLSVQIPEGNLADSGPTEHWAGDGGP
QPKRAKAEDQALLPEADEQIDQRQWTQQHLEAADVCGSTSLALTPPQADQEVDVLDVNVR
GPDGCTPLMLASLRVGSSDISEDDEDAEDSSANIITDLIYQGANLQAQTDRTGEMALHLA
ARYSRADAAKRLLDAGADANARDNMGRTPLHAAVAADAQGVFQILIRNRVTDLDARMNDG
TTPLILAARLAVEGMVAELINCQADVNAVDDHGKSALHWAAAVNNVEATLVLLKNGANRD
MQDNKEETPLFLAAREGSFEAAKILLDHFANRDITDHMDRLPRDVAQDRMHHDIVQLLNE
YNVAHSPTGHPGAMLNSALSPVICGPNRSFLNLKHASLSKKSRKPNAKGIMPTNLTKDAK
RRRKKSLSESKGQFSESSVTLSPVDSLESPHAFASEPTSSPVMPSPGVLHSSPSSLLTAP
SVQAAHSMSFSNLHEMQPLGRGSGTVLPSVSQLLSQHRTTPPNSGLGRLRPANVSTEWMN
RMEMNESQYNEMFGMVPQVMHSHPSVSQQSGLVQADTKHMGVSRESLPPIMTFQLVPKGG
INQQALPQQAQSNCAQNMAGPLSSMYQIPDLAQLPSASFSMAAIPQQDGQVAQTILPAYH
QFQSSMGKYPTPPSQHSCYSSATERTPSHNRHLQGEHPYLTPSPESPDQWSSSSPHSASD
WSDVATSPGNNQRGPAAAHMSEQQRNNMQVYA
NT seq
7299 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcggagcggggccggcgctcgccgccctcctcggcacggtgctggcagtgttc
agccgcgccgagccggcggccgctttacagtgtatggatgattccaagccttgtgttaat
gagggaaggtgcattccttatcaaaatggtacaggatactgcaagtgtcgagaaggcttt
cttggagactactgtcagtacagaaacccctgtgaaagcaatacctgtaagaatggggga
acctgtgaaatgacatcgctgataggaaaggctacctgcaagtgtgctccagggttcacg
ggagaggactgtcagtactctgaatcgcacatctgctatgtgtcccagccctgcctgaac
ggaggaacttgtcatccccacagccaggaaacatacgagtgtgtctgtcctccaggttac
acaggaaaagactgccaatggatcgatgcctgtacatctcaaccttgtgccaacggaagt
acttgtacagtatctggaaataagttctcctgtatctgtctgtctggctacactggccag
aagtgtgagatagatgtgaacgaatgtgccacttcaggcctttgtcaacatggtgggacc
tgtgtcaatgtgcctggttcataccgatgccagtgcaagccgggctatacagggcatcgc
tgtgagagcacgtatgtgccatgttcaccatcaccctgtatgaacggaggaacttgtcac
caaacaagtgacttcacctttgagtgcaactgtctgccaggtttcgaggggagcatctgc
gagcggaacgttgatgactgcccaaatcacaattgccagaatgggggtatatgcgtggac
ggtgtgaacacgtacaactgccgctgcccaccccagtggacaggccagttttgcactgaa
gatgttgacgaatgtcagctccagcccaacgcgtgccagaatggaggtacctgcaccaac
cacaacggaggctatgcctgtgtctgcgtcaatggctggagtggggatgactgcagcaag
aacattgatgactgcttcacggcctcctgtgctaacggatctacttgcattgatcgagtg
gcttctttttcatgcatttgtcctgaaggaaaagcaggtcttctgtgtcacttggatgat
gcatgcgttagcaatccatgccagaagggtgctctgtgtgatacaaatcctgtgaatgga
cactatatctgcacctgtcctcaaggccataagggagcagactgcactgaggatgtggat
gaatgtgcaatggcaaatagcaatccatgtgaacatgctgggaagtgcgtgaacacagaa
ggctctttccactgtgagtgtttgaagggctacacgggacctcgctgtgaaatggacatc
aacgaatgccattcaaatccgtgccaaaacgatgccacctgtctggataaaattggagga
ttcacgtgtctatgtatgccaggttttaaaggtgttcactgtgaagaagatattgatgag
tgtctaagtaatccgtgtgtgaataatggagaatgtcttgataaagtcaaccggttcctc
tgtgtctgtcctcctggattcagtggtgctgtgtgtcagattgatatagatgactgctcc
agcacgccgtgtctcaatggagccaaatgtattgaccatcccaatggctatgagtgccag
tgtgccacaggttttactggcattttgtgtgaggagaacatcaacaactgtgatcctgat
ccttgccaccatggtgaatgtcaagatggaattgattcatacacgtgtatatgtaatcct
ggctacatgggtgccatctgcagtgagcagatagatgaatgccacagcaatccttgcctc
catcaagggcgctgcattgatttggtgaatggctaccagtgcaactgtttgctgggcact
tcaggagtgaactgtgaaaacaactttgatgactgtgcaagtaacccatgcattcatggg
gactgtatcgatggcattaatcgctacaattgtgcttgcaaacctggatatacaggccca
cgctgtaatgtggatattgatgaatgtgcatctaacccttgccataatggtggaacatgt
ataaacgaagtcaatggctttcggtgtgtatgtcctgaaggttaccaccaccctcactgc
cagtcacaggcagatggctgtcttagtaatccctgtgtgcacggtaactgcacgcacatt
gttagtgggtacaagtgcgtctgtgacccaggttggataggagattactgttcgacagaa
gggaacgagtgtaaatcaaacccatgccagaatggaggaacttgtgaggatctgttgaat
ggatatagatgtacttgtaggaaaggattcaaaggtgtgaactgccaggtagtggttgct
ccttgttcccctgatccttgtgagaactcgggaatttgccaagaatctcctgattctgaa
ggctacacctgccagtgtgcccctggctgggaaggggagagatgtacactggatatcgac
gaatgtctctcgaagccctgcaaaaatcatgctttgtgccataatattcaaggcagttac
ctgtgtgaatgtcgtccaggcttcactggaggagactgtgacagtaacattgacgactgc
ctgtcaaatccctgccaaaacggagcttcgtgtgtggatgggataaactctttctcatgc
atctgcctacctggttttcatggagataaatgtcaaacagataccaacgaatgtctgagt
gaaccatgcaggaatggaggcacatgtacccactatgtcaacagctacacatgcaagtgt
cagcctgggtttgagggaaccaactgtgagaacaacattgatgaatgcactgagagctcc
tgtttcaatggtggtacctgcgtggatggcatcaattcttttacctgccagtgtccggtg
ggatttacgggacccttttgcctcatggaaattaatgagtgtgattcacatccgtgcttg
aacaaagggtcttgcgtggacagcctaggcacataccgatgtatatgtcctttgggttac
actgggaagaactgtcagacacctatggatctatgcagcaggtctccctgtaagaacaag
ggcacatgtctccaaactggagcccagactcgatgcgtctgcccttctggctggactggt
gcttattgcgatgtgcccaacgtctcctgtcaagtggcagcttcacaaaggggagtcact
gtggatcagttgtgccagcactctggtcattgcctgaatgttggaaacacgcaccgctgt
cagtgccgggtgggttacacgggcagctactgcgaggagcagctggatgaatgcgactcc
agcccatgccagaacggtgccacctgccgggatcacctgggtggataccagtgcgagtgt
gtgcctggataccagggtgtcaactgtgaatatgaagtggatgagtgccagtttcagccc
tgccagaatgggggaacgtgtatagaccttgtcaaccatttcaagtgctcctgtccacca
ggcactcggggtcgcttctgtgaggagaatgtagatgactgtgtttcagactcgggagta
ccccgctgctttaacggagggcagtgcattgaccagatcgggggctatagctgtgtttgt
ctcccaggctttgcaggcgagcgatgcgagggggatatcaatgaatgcctctctaatcct
tgtaaccctcgtggaagtctggattgtgttcagctgataaatgattatacgtgcatctgt
cgtagtgcttttactggtcgtcactgcgagagtgtaatagatgtgtgtcctcggaagcct
tgtcagaacggaggtacctgtgctgttgccagcaatatgccagacgggttcatctgccag
tgtcctccgggttactctggggcgaaatgtgagttcagcagccacagtacttgtgggcaa
gtgaaatgcaagaaaggcgagcagtgcatccagacatcatctggcccacggtgctactgc
cccaagttgtctgtgggagaggaatgccagacaaacacgggctgcgccagtgccccctgc
cagaacggtggaagctgccaccctcgttctcagcctccttactattattgtcagtgtcct
gatcacgcccaaggcagccagtgtgagcagctcacacatcccagccaagagcctctagga
tgtttggattcccagtgtgcagaaaaagcaaaagatggctattgtgatgaagactgtaac
actcatgcctgccagtgggatggaggcgactgttccctgacaatggaagatccttgggcc
aactgctcctcttcattgcgctgctggatgcttttcaatggacaatgtgacgagttctgc
aacacacccgagtgtctgtttgacaactttgaatgtcagcaaaatagcaaaacatgcaag
tatgacaagtattgtgcagatcactacgcggatggccgctgtgaccagggctgtaacagt
gaggagtgtggctgggacggtctcgactgcgctggtgacaaagctgagaaactggcagag
gggaccctcatcattgtggtcctgatgccccctgatgagctgctgggcgatgttcgcagc
ttcctgcgcactttgggaactctcctgcacaccaatctgagaatcaagctggactcccag
ggaaaccccatggtattcccatactatggggagaagtcagcagcacggagtcggcgatcc
cttgtggtcattcgcaagcacagagaattagagcaagaggtcattggcaccagggtgttc
ctggagattgacaaccgtcagtgtgcagaggattcagagcaatgttttcagaacacagaa
gctgctgcagcactcttagctgctcaagcaatcaagggcatgttgccttatccttttgtg
tctgtccaaagtgagcccttgttaccaccgaagacccagttgctttatctacttgctgtg
gcagctttgatcatcctcttaatccttctcttgggtgtgatgatggcgaagcgtaagcgc
aaacatggctcactgtggctcccagagggcttcattctgcgcagggatcctagtaatcat
aagcgcagagagccggttggggaagatgcagttggactcaaaaatctttcagtccagata
ccagagggtaacctggcggattctggaccaactgaacactgggcgggtgatggtggacct
cagccaaagagagcaaaggctgaggaccaagccttgctcccagaagctgatgagcagata
gaccagcgccagtggacgcagcagcacttggaggcagcagatgtctgtgggagcacgtcg
ctagcccttacaccacctcaagcagatcaagaagtcgatgttctggatgtcaatgtcaga
gggccagatggatgtactcctctcatgctggcatctctgcgtgtgggcagttccgatatt
agtgaggatgatgaggatgcagaagactcctcagcaaatataataacagatctgatctat
cagggtgccaacctgcaggcccaaacagaccgcactggggagatggcgctgcacctagca
gcccgttattcaagagcagatgctgcaaaacgtttgctggatgctggtgcggatgccaat
gcacgggacaacatgggacggactcccctgcatgcagctgtagctgctgatgcccagggc
gtctttcagatcttgatccgtaacagagtgacagacttggatgctcgcatgaatgacgga
acaaccccgttaattctggctgcacggctggctgtggaaggaatggtggctgagctgata
aattgccaagccgatgtgaacgctgtagatgaccatggtaaatctgctcttcactgggct
gctgctgtcaacaacgtggaagcaacactagtgctgctgaaaaatggagccaacagagac
atgcaggataacaaggaggagacacctctcttccttgctgctcgggaaggcagtttcgaa
gcagcaaagatcttgctggaccattttgccaatcgagacatcacggaccacatggatcgt
ctgccccgggacgtggcccaggaccggatgcaccacgacatagtgcagcttctcaacgag
tacaatgtagcgcacagccccaccgggcaccccggtgccatgctgaactctgccctctcc
ccggtcatttgtggcccaaatagatcctttctcaatctgaagcacgcttccttaagcaag
aagtcgcgaaaaccgaatgccaaaggcatcatgcccacaaacctcaccaaagatgcaaag
aggagaaggaagaagtccctcagcgagagcaaagggcagttctcagagagctcagtaacc
ctgtcaccagtcgactccctcgaatcgccccatgcttttgcatccgaaccaacatcgtct
cctgtgatgccgtcgccaggggtgttacactcgtcgcccagctccctgctgaccgctccg
tcggtgcaggctgcgcactcgatgtccttctccaacctccacgagatgcagcccttagga
cgtggatccggcacggtgctcccgtctgtcagccagctgctctcacagcacagaacgacc
cctccgaacagcgggctcggcaggctgcggccagccaacgtttccaccgagtggatgaat
cgcatggagatgaacgagtctcagtacaacgagatgttcggcatggtgccgcaggtgatg
cattcgcaccccagcgtttctcagcagagcggcttggtccaagcagatacgaagcacatg
ggagtgtccagggagtctctgccccctatcatgactttccagctggttcccaagggtggc
ataaaccagcaagcactgccacagcaggcccagtcaaactgcgctcagaacatggctggt
cctctcagctccatgtaccagatcccggatttagctcagctgcccagcgcctccttctcc
atggctgccatccctcagcaggacgggcaggtggctcagacaatcctcccagcctaccac
cagttccagagctcgatggggaagtaccccacgcctccatcacagcacagctgctactcc
tcggccacagaacggactcctagccacaaccggcacttacaaggggagcacccatacctg
actccgtcgcccgaatctccagaccagtggtcaagttcctccccacactcagcctctgac
tggtctgatgtggcaaccagtcccggtaacaaccagcgcgggccggcggccgcccacatg
tcagagcagcagcggaacaacatgcaggtgtacgcctga
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integrated database retrieval system
