Cygnus atratus (black swan): 118243486
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Entry
118243486 CDS
T09349
Symbol
WDR47
Name
(RefSeq) WD repeat-containing protein 47 isoform X1
KO
K24746
WD repeat-containing protein 47
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cata04990
]
118243486 (WDR47)
Domain-containing proteins not elsewhere classified [BR:
cata04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
118243486 (WDR47)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
LisH_TPL
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_NUP159_NUP214
TPR1-like_2nd
WD40_MABP1-WDR62_1st
Vir_act_alpha_C
Motif
Other DBs
NCBI-GeneID:
118243486
NCBI-ProteinID:
XP_035393465
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Position
8:complement(5795508..5819551)
Genome browser
AA seq
962 aa
AA seq
DB search
MIEGTSEAEPLGTGRAPIPLWALHRRDSGAAPGQAGESYAAIMTAEETVNVKEAEIIKLI
LDFLNSRKLHISMLALEKESGVINGLFSDDMLFLRQLILDGQWDEVLQFIQPLECMEKFD
KKRFRYIIMKQKFLEALCVNNAMSAEDEPQHLEFTMREAVQCLHALEEYCPSKEDYSKLC
LLLTLPRLTNHAEFKDWNPSTARVHCFEEACVMVAEFIPADRKLSEAGFKASNNRLFQLV
MKGLLYECCVEFCQSKATGEEITESEVLLGIDLLCGNGCDDLDLSLLSWLQNLPATVFSC
AFEQKMLNIHVDKLLKPTKAAYADLLTPLISKLSPYPSSPMRRPQSADAYMTRSLNPALD
GLSCGLTNHDKRVTDLGTKTSPMSHSFANFHYPGVQNLSRSLMLENTECHSIFEESPERS
DTPVEPQHPINSETLCQSSVPENEPVNGAQSQGSAKQEKNELRDSTEQFQEYYRQRLRYQ
QHLEQKEQQRQLYQQMLLEGGVNQEDGADQQQNLTEQFLNRSIQKLGELNIGMDSLGNDV
QTLSQQCNGSRGNASTNPASNFTSPPSDASQRLTADGQNVNTSTPRKRGSANQIPFPEES
PVQGNQTASEHAVTQPQLDDSSGNLSRTRGDEDDKSKKQFICINTLEDTQAVRAVAFHPS
GSLYAVGSNSKTLRVCAYPEVIDPSAYNTPKQPVVRFKRNKHHKGSIYCVAWSPCGQLLA
TGSNDKYVKVLPFNAETCNATGPDLEFSMHDGTIRDLAFMEGPESGGAILISAGAGDCNI
YTTDCQRGQGLHALSGHTGHILALYTWSGWMIASGSQDKTVRFWDLRVPSCVRVVGTTFH
GTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQSYHPHASDVRSVRFSPGAHYL
LTGSYDMKIKVTDLQGDLTKQLPLMVVGEHKDKVIQCRWHTQDLSFLSSSADRTVTLWTY
NG
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgattgagggcacgtcagaagcggagccgctaggtactggccgggccccgattcccctg
tgggctctgcataggcgggactctggagcggcccctgggcaggccggagagtcgtatgct
gccatcatgacggctgaagaaacggtgaacgttaaagaagctgaaataatcaaactaatt
ctagactttctgaactccaggaaacttcatatcagtatgctggcacttgagaaagaaagt
ggggtcattaatggcctgttttcagatgacatgctttttttaaggcagttgattcttgac
ggtcaatgggatgaggttcttcaatttattcagcctcttgaatgtatggaaaaattcgac
aagaaaagatttcgttacattataatgaagcagaagttcttggaagccttatgtgtaaac
aatgcaatgtcagcagaagatgagcctcagcatctggaattcacaatgcgagaggctgtg
cagtgcctacatgcgttggaagaatactgtccctctaaggaagactacagtaaactctgc
ttgctgctcacattgcctcgcttgaccaaccatgcagaattcaaagactggaatcccagc
acagcccgtgtgcactgctttgaagaagcttgtgtaatggtggcagagtttattcctgct
gataggaaactgagtgaagctggtttcaaagcaagtaacaatcgtttatttcagcttgta
atgaagggattgctgtatgaatgttgtgtggaattctgtcagagtaaagcaacgggagaa
gaaattacagaaagtgaagtattgctgggcattgatctcttatgcggtaatgggtgtgat
gacttggaccttagcttattgtcatggctgcagaatctgccagctactgttttttcctgt
gcttttgaacaaaagatgcttaatattcatgttgataaactcctcaagcctacaaaagct
gcatatgctgatcttttgacacctcttatcagcaagctttctccatatccatcatcccca
atgagacggcctcagtctgctgatgcttacatgacccgttccttaaaccctgccttagat
gggctgtcatgtggattaacaaatcatgataagagagtcacagaccttgggaccaaaact
tctccaatgtcgcactcctttgctaatttccattacccaggagtacagaatctcagtcga
agtctcatgcttgagaatactgagtgtcacagtatttttgaagagtcacctgagcgaagt
gatactcccgtggagccacagcatcccatcaacagtgagactttgtgccagagttctgtt
ccagaaaatgaaccagttaatggagcacagagtcagggatctgccaaacaagagaaaaat
gagcttcgtgattcaacagagcagtttcaagaatattacagacaaagactacgttaccag
cagcacttagaacagaaggagcaacaacgtcagttgtaccagcaaatgttgttggaagga
ggtgtaaaccaagaagatggagctgaccagcaacagaatcttaccgagcagtttctcaac
agatctatccagaagctaggagaattaaatataggtatggacagtcttggaaatgatgtg
caaacgcttagccagcaatgtaatgggagcagagggaatgcatctactaacccagcaagt
aactttacatcaccaccttcagatgcttctcagaggctaacagctgatggtcaaaatgtt
aacacaagcactcctcgaaaacgtggatcagctaatcaaataccctttcctgaagagtcg
cctgtgcaggggaatcaaactgcatcagagcatgctgtcactcagccacagttggacgac
tcttcagggaatctgagtaggacaagaggtgatgaggatgacaaatcaaaaaaacagttc
atttgcattaatactctagaagacacacaagctgtcagagctgtagcctttcatcccagt
gggagtttatatgctgttggctccaactctaaaactttgagagtgtgtgcctacccggaa
gtaattgacccaagtgcttataatactcctaaacaacctgtagttcgcttcaaaagaaac
aagcatcataaaggatcaatctactgtgtagcatggagtccctgtggacagttgctggct
actggttctaatgataaatatgtgaaagtactaccttttaatgctgaaacttgtaatgcg
acaggaccagatttggaattcagcatgcatgatgggacaatcagagatcttgcttttatg
gaaggcccagaaagtggtggtgctattttaataagtgctggagcaggggactgtaatatt
tacactacagattgtcagcgaggacaaggtctgcatgctctaagtggtcacactggtcat
attttagcactttatacgtggagtggttggatgattgcatctggatcccaagacaagact
gtaagattctgggatctgagagtgccaagttgtgttcgtgttgtgggaacaacgtttcat
ggaacaggaagtgctgtagcttcagtagctgtagatcctagcggtcgtcttctggctacg
ggacaagaggactctagctgtatgttgtatgatattcgaggaggacgaatggttcagagc
tatcatcctcatgccagtgatgttcgctctgtgcgcttctctccaggggctcactacttg
ctcacgggatcatatgatatgaaaataaaggtgacagacttgcaaggggacctcacgaag
cagcttcctcttatggtggtaggagagcacaaggacaaagttattcaatgcagatggcat
acgcaagatctttccttcttgtcttcgtctgcagacagaactgtaaccctttggacctac
aatggctag
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