Cygnus atratus (black swan): 118243557
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Entry
118243557 CDS
T09349
Symbol
RXRG
Name
(RefSeq) retinoic acid receptor RXR-gamma
KO
K08526
retinoid X receptor gamma
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03320
PPAR signaling pathway
cata04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
118243557 (RXRG)
03320 PPAR signaling pathway
118243557 (RXRG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118243557 (RXRG)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cata03310
]
118243557 (RXRG)
Transcription factors [BR:
cata03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
118243557 (RXRG)
Nuclear receptors [BR:
cata03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
118243557 (RXRG)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
118243557
NCBI-ProteinID:
XP_035393602
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Position
8:10230694..10250159
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AA seq
467 aa
AA seq
DB search
MYGNYPHFIKFPVGFGNSPVHASSTSVSPVSSLSMGSAVDGHHNYLEAPTNASRVLPSPM
NAIGSPVGTLGSPYRVIASSIGSHPVALSSAPGMNFVTHTGPQLNVLNNVSSSEDVKPLP
GLTGMGNMNYSSTSPGSLAKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCR
DNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRSRERSENEAESTSSGSEDMPV
ERILEAELAVEPKTEAYSDVNTESSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLE
DQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVS
KMKDMQMDKSELGCLRAIVLFNPDAKGLSSPSEVESLREKVYATLEAYTKQKYPEQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPLQVT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtacgggaattatcctcacttcattaagtttcccgtgggctttggcaattcccctgtt
cacgccagctccacatccgtgagcccagtgtcgagcctctccatgggcagcgcagtggac
gggcaccacaactacctcgaggctcccacgaatgcctcccgggtgctgccgtcccccatg
aacgccatcgggtctccagtgggcacgctgggctcgccatacagggtcatcgcgtcctcc
attggctcgcatcccgtcgctctgtcctcggccccgggcatgaatttcgtgacacacacc
ggcccacagctcaacgtcctcaacaacgtcagcagctcggaggatgtcaagcccctgcca
ggtctcacagggatggggaacatgaattattcatctacaagcccaggttccttagccaaa
cacatctgtgccatctgtggggacaggtcctcagggaagcactacggggtgtacagctgt
gagggctgcaagggcttcttcaagaggacgatccggaaggacctgatctacacctgccgg
gacaacaaagactgcctcatagacaagcgccagcgcaatcgctgccagtactgccgctat
cagaagtgcctcgccatggggatgaagagggaagctgtgcaggaggagaggcagaggagc
agggagcggagcgaaaatgaagctgagtccacaagcagcggcagtgaggacatgcctgtg
gagaggatcctggaagcggagctggcagtcgaacccaagacagaggcgtacagcgacgtc
aacacagagagctcaacgaacgaccccgtcaccaacatctgccacgctgctgacaagcag
ctcttcacgctcgtggagtgggccaagcgcatcccccacttctctgacctgacgctggag
gaccaagtcatcctcctccgggcaggctggaacgagctgctcatcgcctctttctcccac
cgctccgtgtcggtgcaggatggcatcctcctggccacgggcttgcatgtgcaccgtagc
agcgctcacagtgctggtgtgggttccatcttcgacagggttttgacagagctggtgtcc
aaaatgaaggacatgcagatggataagtcagagctgggctgcctgcgagccattgtcctg
tttaatccagatgccaagggtttgtccagcccctcagaagtggagtcgctgcgggagaag
gtctacgccacgctggaagcctacacgaagcagaagtatcccgagcagccagggcggttt
gccaaactcctcctgcgcctgccagcgctgcggtccatcgggctgaagtgcctggagcac
ctcttcttcttcaagctgatcggtgacacccccattgacaccttcctcatggagatgctg
gagacgcccctgcaggtcacttga
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