Cygnus atratus (black swan): 118243605
Help
Entry
118243605 CDS
T09349
Symbol
PTBP2
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cata03041
]
118243605 (PTBP2)
Spliceosome [BR:
cata03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
118243605 (PTBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
118243605
NCBI-ProteinID:
XP_035393695
LinkDB
All DBs
Position
8:2153865..2203174
Genome browser
AA seq
595 aa
AA seq
DB search
MHNARRMREGDDAEERNPPLGTVGWFPCRPRRHFLAALPCSSAARLSVPLLRASSCSAMD
GIVTDVAVGVKRGSDELLSGSVLNSPNSNMSSMVVTANGNDNKKFKGDDKMDGAPSRVLH
IRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLR
NQPIYIQYSNHKELKTDNTLNQRAQAVLQAVTAVQATNAPISGTTVSESAVTPAQSPVLR
IIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQN
IYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLG
LPVAAVPGALSPLAIPNAAAAAAAAAAGRVGMPGVSAGGNTVLLVSNLNEEMVTPQSLFT
LFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMSHLNGQKMYGKIIRVTLSKHQTVQL
PREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFAN
TGGTVKAFKFFQRDHKMALLQMSTVEEAIQALIDLHNYNLGENHHLRVSFSKSTI
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacgcccggcgcatgcgggagggggacgacgccgaggagcggaatccgccgctc
ggcaccgttggttggtttccgtgcaggccccgccgccattttctcgcagccctcccgtgc
tcgtcggccgcgcggctctccgtcccgctgctccgcgcttcgtcctgctcggcgatggac
ggcattgtcactgatgttgcagttggtgtgaagagaggatctgacgaacttctttcaggc
agtgtactcaatagcccgaactctaacatgagcagcatggtagttactgccaatggtaat
gacaacaagaaattcaaaggtgacgataaaatggatggggctccgtctcgtgttcttcat
atcagaaaattgcctggggaagtaacagaaacagaagtcattgctttaggtttacctttt
ggtaaggtaaccaacatcctgatgctgaaagggaaaaatcaggcttttttggaacttgct
acagaagaagcagctatcactatggttaattactactctgctgtgacacctcatcttcgt
aaccaacctatctatatccagtattccaatcataaagaactaaagactgataacacactg
aaccagcgggcccaagctgttcttcaggcagtgacagccgtgcaggcaacaaatgctccc
ataagtgggaccactgtgagtgagagtgcagtgactccagctcagagtccggtacttaga
ataattattgacaacatgtactatcccgtaactctggatgttcttcatcagatattctct
aaatttggtgctgtattgaagataatcacattcacaaagaataaccagtttcaagcttta
ctgcagtatggtgatccagtgaatgcacagcaagcaaaactagccctagatggtcagaat
atttataatgcttgctgtaccctacggattgatttttccaagttggtgaatttgaatgtc
aagtacaacaacgataaaagcagagactacactcgtcctgatcttccatctggtgatgga
caaccagcgctggacccagctattgctgcagcatttgcaaaggagacctcccttttaggg
cttcctgttgcagctgttccaggagctctgagtcctttggctattccaaatgctgctgct
gctgcagctgctgctgctgctggccgtgtgggaatgcctggagtctcagctggtggcaat
acagtcctcctggttagcaatttaaatgaagagatggttacgccccaaagtctgtttacc
ctcttcggtgtttatggtgatgtgcagcgtgtgaagattttatacaataagaaagacagt
gctcttatacagatggctgatggaaaccagtcacagctggccatgagccatcttaatgga
caaaaaatgtatggaaagattattcgggttaccctttctaaacatcagacagtacaacta
cctcgagagggacttgatgaccaagggctgactaaagattttggtaattcacctctgcat
cgcttcaagaaacctggttcaaaaaactttcagaatatattccctccatctgcaactctt
catctatccaatattccaccatcagtagcagaagaggatctccgcacactgtttgctaac
actggaggcactgtgaaagcatttaaattttttcaaagagatcacaagatggcacttctt
cagatgtcaacagtagaagaagctattcaggctttgattgatcttcacaattacaatctt
ggagaaaatcaccatctgagagtttctttctccaagtcaactatttaa
DBGET
integrated database retrieval system
