Cygnus atratus (black swan): 118243765
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Entry
118243765 CDS
T09349
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118243765 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cata03041
]
118243765 (PRPF38A)
Spliceosome [BR:
cata03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
118243765 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
118243765 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
118243765
NCBI-ProteinID:
XP_035394033
EnsemblRapid:
ENSACYG00000002645
LinkDB
All DBs
Position
8:26543397..26547604
Genome browser
AA seq
312 aa
AA seq
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MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHEERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERAPSPDHRRRGYRDLDKPRRSPAVRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccggacggtgaaggacgcgcacagcatccacggcaccaacccgcagtacctg
gtggagaagatcatccgcacccgcatctacgagtccaagtactggaaggaggagtgcttc
ggcctcacggctgagctggtggtggacaaagccatggagctgaagtacgtggggggcgtc
tacggcgggaacatcaagcccacgccattcctgtgcctgacgctgaagatgctgcagatc
cagcccgaaaaagacatcatcgtggagttcatcaaaaacgaggacttcaagtacgtccga
atgctcggtgcgttgtacatgaggctgacgggcacagctattgactgctacaagtatctt
gaaccactctacaatgactaccgaaaaataaaaagtcagaacagaaatggggaatttgag
ttgatgcacgtggatgaatttattgatgaactactccatgaggaacgtgtatgcgatatc
attctgcctcgattacagaaacggtatgttctggaagaagctgagcaacttgagcctcgt
gttagtgctttggaagaagacatggatgatgtagaatctagtgaggaggaagaggaggaa
gatgaaaagctggagcgagcaccctctcctgaccatcgcagaagaggctacagggacctt
gataaacctcgcagatctccagccgtgcgatacaggcggagccggagcaggtctccacga
aggcgaagccgctctccaaagagaagaagtccatcaccacgccgggagaggcatcgcagc
aaaagcccaagacgacaccggagcagatccagggagaggcgccacagatcaagatctaaa
tctccagggcaccaccgtagtcacagacacagaagtcattccaaatcccctgaaagatct
aagaaaagccacaagaagagtcgtcgagggaatgaataa
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