Cygnus atratus (black swan): 118244026
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Entry
118244026 CDS
T09349
Symbol
PAX2
Name
(RefSeq) paired box protein Pax-2 isoform X1
KO
K15608
paired box protein 2
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118244026 (PAX2)
04131 Membrane trafficking [BR:
cata04131
]
118244026 (PAX2)
03036 Chromosome and associated proteins [BR:
cata03036
]
118244026 (PAX2)
Transcription factors [BR:
cata03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
118244026 (PAX2)
Membrane trafficking [BR:
cata04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
118244026 (PAX2)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
118244026 (PAX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
Homeodomain
DUF6115
HTH_Tnp_IS1
Ribosomal_S13_N
Motif
Other DBs
NCBI-GeneID:
118244026
NCBI-ProteinID:
XP_035394586
LinkDB
All DBs
Position
7:20426357..20507104
Genome browser
AA seq
350 aa
AA seq
DB search
MDMHCKADPFSAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVS
HGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAE
GICDNDTVPSVSSINRIIRTKVQQPFHPTPDGSGTVPSTASPPVSSASNDPVGSYSINGI
LGIPRSNGEKRKRDEDVSEGSVPNGDSQSSVDSLRKHLRGDTFTQQQLEALDRVFERPSY
PDVFQTSEHIKSEQGNEYSLPALTPGLDEVKSSLSTSANPDLGTNVSGPQTYPVVTGSEF
SGNPYSHPQYTTYNEAWRFSNPALLSSPYYYSATSRGSAPPTAAAAYDRH
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggatatgcactgcaaggcagaccccttctcagcaatgcaccggcacgggggtgtgaac
cagctcgggggggtgtttgtgaacggcaggcccctacctgacgtggtgagacaaaggata
gtggagctggctcaccagggggtgcgaccctgtgacatttccaggcagctgcgggtcagc
cacggttgtgtcagcaagatcctgggcaggtattacgagacggggagcatcaagcccgga
gtgatcggcggctccaaacccaaagtagcgacccccaaagtagtggataaaatcgccgag
tacaagagacagaacccgaccatgttcgcctgggagatccgggacaggctactggccgag
ggcatctgcgacaacgacacggtccccagcgtctcctccataaacaggattatcagaacc
aaagttcagcaaccttttcacccaacaccagatgggagcgggacagtgcccagcacagca
tcccctcccgtctccagtgcctccaatgatccagtgggctcttactccattaacgggatc
ctggggattcctcggtcgaatggcgagaagaggaaacgtgatgaagatgtgtccgagggc
tcagttcccaacggagactcccagagcagcgtggacagtttgcggaagcaccttcgtggc
gacactttcacccagcagcagctggaagctttagatcgagtttttgagcgtccttcttac
cctgacgtctttcaaacatcagagcacatcaaatctgagcagggtaatgagtactccctc
ccagctctgacccctggtctcgatgaagtcaaatcaagtctatccacctctgctaaccca
gacctggggacaaatgtgtcaggaccccagacgtaccctgtggtgaccgggagcgagttc
tcagggaacccctacagtcaccctcagtacacaacctacaacgaggcctggcgattcagc
aaccctgcattactaagttccccttattattatagtgccacatcccggggctccgcacct
cccactgctgccgctgcctatgaccgccactag
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