Cygnus atratus (black swan): 118244193
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Entry
118244193 CDS
T09349
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118244193 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cata03019
]
118244193 (HBS1L)
Messenger RNA biogenesis [BR:
cata03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118244193 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
118244193
NCBI-ProteinID:
XP_035394893
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Position
3:complement(60715351..60776295)
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AA seq
856 aa
AA seq
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MSRHRNVRGYNYDEDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPATCAEPLEEEYG
YEGTEDTAGYFASNHQLDEVDRARVNSCLDQMREVLAESVPEQTMVQAVLDSKFDVQKAL
DLVLSQGSKQNVKTHNEDAMIVGKTTKGDLLCCPEIFINKDSFSCAVENVADNTSKPGLG
NLTAKAGSACYSLVANDKMLLNVKKSSVPSSEKKGSKSSSLVLSSFSDDLCKGSLCEPVN
NQAENQLPESANVISLIPDSEDVCFSIGSNPSGNSSFKKFKSKETQDLKSLLMQNVACDS
LSLQDSIPLVSSNVSDGKSRDSQSARMESEIVPKVTKMTVSGKKQSMGFEVPCMIAEENG
HANTPQKGLLNEDASITSGVIEAVSKSALSPQVAQVSEEQNAVPTPVKKTSKTKPQIDVK
AELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKKAGKASFA
YAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAAQADVAILV
VDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEITSKLGQF
LKQAGFKESDVAYIPTSGLGGENLVTRSQSSDLTKWYTGKCLLEQIDSFKPPQRSVDKPF
RLCVADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPNETCTAKGITLHDEPVDWAAAGD
HVSLTLTGMDIIKINVGCVFCDPKEPIKVCTRFRARILIFNIEVPITKGFPVLLHYQTVS
EPATIRRLLSVLHKSTGEVTKKKPKFLTKGQNALIELQTQRPVALELYKDFKELGRFMLR
YSGSTIAAGVITEIKE
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcacaggaacgtccgaggctacaactacgacgaagattttgaagatgatgat
gtgtatggccaatcagtagaagatgactattgcatttctccttcaacagccgctcagttt
atctactcaagacgagacaaaccagcaacatgtgctgagccattagaagaagaatatggc
tacgaaggtacagaagatactgctggttattttgcatccaatcatcagttggatgaagtt
gatagagcccgtgttaattcatgccttgatcaaatgagagaagttttggcagagtctgta
ccagagcaaacaatggtgcaagcagtactggatagtaaatttgatgtacagaaggccttg
gatcttgtgctttcccaaggcagtaagcaaaatgtgaagacccacaatgaggatgctatg
attgtaggaaagacgacaaaaggagacttactttgttgtccagaaatatttattaataaa
gacagtttctcttgtgcagtagaaaatgttgctgacaacaccagcaaacctgggcttgga
aacttgacagccaaagctggttcagcttgttactccttagttgcaaatgacaaaatgctc
cttaatgttaaaaaatccagcgtaccttcatctgaaaagaaaggatcaaaatcctcatca
cttgttctgtcttctttcagtgatgatttgtgtaaaggatcactttgtgagcctgtgaat
aatcaggcagagaatcaactaccagaaagtgctaatgtaataagtttgattcctgacagt
gaagatgtttgctttagcataggaagtaacccatctggaaattcttcctttaagaagttc
aaaagcaaggagacacaggacttaaaatccttgctgatgcagaatgtggcttgtgattct
ctgagtcttcaagacagcattcctcttgtttcctcaaatgtttctgatggaaaatcaagg
gattcccagtcagccagaatggaatctgaaattgtgccaaaagttaccaaaatgacagtg
tctggaaagaaacagtctatgggatttgaagttccatgcatgattgctgaagaaaatggc
catgctaacacacctcaaaaaggactgctaaatgaagatgctagcataacttctggggta
attgaggcagtctcaaaatctgctctttcaccccaagtagcgcaggtttcagaagagcag
aatgccgtgcctactccagtaaaaaagacgagcaagacaaaaccacaaatagatgtgaaa
gcagagttggagaagagacaaggaggaaagcaactactaaatttggtggtaataggacat
gttgatgcaggtaaaagtactttaatgggtcatctactctaccttttgggaaatgtgaac
aaaagaactatgcacaaatacgaacaggaatctaagaaggctggcaaagcttcgtttgcg
tatgcatgggtcttggatgaaactggggaagaaagagaaaggggagtaacaatggatgtg
ggcatgaccaaatttgagacaaagactaaagtaattacattgatggatgctccaggccac
aaagacttcattccaaatatgatcacaggagctgcccaggctgatgtagctattttggtt
gtggatgccagcagaggagagtttgaagctgggtttgagacaggtggacaaactcgagaa
catggattattagtgcgttctcttggagtgacacagctagctgttgcagtcaataaaatg
gaccaggtcaattggcagcaagaaagatttcaggaaattaccagtaagcttggccaattt
cttaaacaagctggctttaaggaatctgatgtggcttatattccaacaagtggtcttggt
ggtgaaaatctagtcacaagaagtcagtcaagtgacctgacaaagtggtatacaggaaag
tgtttgttagagcaaattgattctttcaagccaccacaaagatcagtggataaaccattt
aggttgtgtgttgctgacgtttttaaagaccaaggatcaggattttgtgtgactggaaaa
atagaagcaggctatattcaagttggagaacgacttctggcaatgcctcctaatgaaact
tgcactgcaaaaggaatcacactgcatgatgaaccagttgattgggctgcagcaggagat
cacgttagtctcactttgaccggcatggatatcatcaaaatcaatgttggctgtgtattt
tgtgatcccaaggagcccattaaagtttgcactcgattcagagctcggattctcattttt
aatattgaggttccaatcactaaaggattccctgtgcttttacactatcaaaccgtaagt
gaacctgctactattagaagattattgagtgtcctgcacaaaagcactggtgaagtgaca
aagaaaaagcctaagttcctgactaaaggccagaatgctttaatagaactacagactcaa
aggcctgttgctctagagttgtataaagattttaaagagcttgggagatttatgttacgc
tacagtggttctactattgctgcaggagttatcacagagattaaagaatga
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