KEGG   Cygnus atratus (black swan): 118244193
Entry
118244193         CDS       T09349                                 
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
  KO
K14416  elongation factor 1 alpha-like protein
Organism
cata  Cygnus atratus (black swan)
Pathway
cata03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cata00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    118244193 (HBS1L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cata03019]
    118244193 (HBS1L)
Messenger RNA biogenesis [BR:cata03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     118244193 (HBS1L)
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 HBS1_N GTP_EFTU_D2 MMR_HSR1 AAA_22 DO-GTPase2
Other DBs
NCBI-GeneID: 118244193
NCBI-ProteinID: XP_035394893
LinkDB
Position
3:complement(60715351..60776295)
AA seq 856 aa
MSRHRNVRGYNYDEDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPATCAEPLEEEYG
YEGTEDTAGYFASNHQLDEVDRARVNSCLDQMREVLAESVPEQTMVQAVLDSKFDVQKAL
DLVLSQGSKQNVKTHNEDAMIVGKTTKGDLLCCPEIFINKDSFSCAVENVADNTSKPGLG
NLTAKAGSACYSLVANDKMLLNVKKSSVPSSEKKGSKSSSLVLSSFSDDLCKGSLCEPVN
NQAENQLPESANVISLIPDSEDVCFSIGSNPSGNSSFKKFKSKETQDLKSLLMQNVACDS
LSLQDSIPLVSSNVSDGKSRDSQSARMESEIVPKVTKMTVSGKKQSMGFEVPCMIAEENG
HANTPQKGLLNEDASITSGVIEAVSKSALSPQVAQVSEEQNAVPTPVKKTSKTKPQIDVK
AELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKKAGKASFA
YAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAAQADVAILV
VDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEITSKLGQF
LKQAGFKESDVAYIPTSGLGGENLVTRSQSSDLTKWYTGKCLLEQIDSFKPPQRSVDKPF
RLCVADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPNETCTAKGITLHDEPVDWAAAGD
HVSLTLTGMDIIKINVGCVFCDPKEPIKVCTRFRARILIFNIEVPITKGFPVLLHYQTVS
EPATIRRLLSVLHKSTGEVTKKKPKFLTKGQNALIELQTQRPVALELYKDFKELGRFMLR
YSGSTIAAGVITEIKE
NT seq 2571 nt   +upstreamnt  +downstreamnt
atgtcccggcacaggaacgtccgaggctacaactacgacgaagattttgaagatgatgat
gtgtatggccaatcagtagaagatgactattgcatttctccttcaacagccgctcagttt
atctactcaagacgagacaaaccagcaacatgtgctgagccattagaagaagaatatggc
tacgaaggtacagaagatactgctggttattttgcatccaatcatcagttggatgaagtt
gatagagcccgtgttaattcatgccttgatcaaatgagagaagttttggcagagtctgta
ccagagcaaacaatggtgcaagcagtactggatagtaaatttgatgtacagaaggccttg
gatcttgtgctttcccaaggcagtaagcaaaatgtgaagacccacaatgaggatgctatg
attgtaggaaagacgacaaaaggagacttactttgttgtccagaaatatttattaataaa
gacagtttctcttgtgcagtagaaaatgttgctgacaacaccagcaaacctgggcttgga
aacttgacagccaaagctggttcagcttgttactccttagttgcaaatgacaaaatgctc
cttaatgttaaaaaatccagcgtaccttcatctgaaaagaaaggatcaaaatcctcatca
cttgttctgtcttctttcagtgatgatttgtgtaaaggatcactttgtgagcctgtgaat
aatcaggcagagaatcaactaccagaaagtgctaatgtaataagtttgattcctgacagt
gaagatgtttgctttagcataggaagtaacccatctggaaattcttcctttaagaagttc
aaaagcaaggagacacaggacttaaaatccttgctgatgcagaatgtggcttgtgattct
ctgagtcttcaagacagcattcctcttgtttcctcaaatgtttctgatggaaaatcaagg
gattcccagtcagccagaatggaatctgaaattgtgccaaaagttaccaaaatgacagtg
tctggaaagaaacagtctatgggatttgaagttccatgcatgattgctgaagaaaatggc
catgctaacacacctcaaaaaggactgctaaatgaagatgctagcataacttctggggta
attgaggcagtctcaaaatctgctctttcaccccaagtagcgcaggtttcagaagagcag
aatgccgtgcctactccagtaaaaaagacgagcaagacaaaaccacaaatagatgtgaaa
gcagagttggagaagagacaaggaggaaagcaactactaaatttggtggtaataggacat
gttgatgcaggtaaaagtactttaatgggtcatctactctaccttttgggaaatgtgaac
aaaagaactatgcacaaatacgaacaggaatctaagaaggctggcaaagcttcgtttgcg
tatgcatgggtcttggatgaaactggggaagaaagagaaaggggagtaacaatggatgtg
ggcatgaccaaatttgagacaaagactaaagtaattacattgatggatgctccaggccac
aaagacttcattccaaatatgatcacaggagctgcccaggctgatgtagctattttggtt
gtggatgccagcagaggagagtttgaagctgggtttgagacaggtggacaaactcgagaa
catggattattagtgcgttctcttggagtgacacagctagctgttgcagtcaataaaatg
gaccaggtcaattggcagcaagaaagatttcaggaaattaccagtaagcttggccaattt
cttaaacaagctggctttaaggaatctgatgtggcttatattccaacaagtggtcttggt
ggtgaaaatctagtcacaagaagtcagtcaagtgacctgacaaagtggtatacaggaaag
tgtttgttagagcaaattgattctttcaagccaccacaaagatcagtggataaaccattt
aggttgtgtgttgctgacgtttttaaagaccaaggatcaggattttgtgtgactggaaaa
atagaagcaggctatattcaagttggagaacgacttctggcaatgcctcctaatgaaact
tgcactgcaaaaggaatcacactgcatgatgaaccagttgattgggctgcagcaggagat
cacgttagtctcactttgaccggcatggatatcatcaaaatcaatgttggctgtgtattt
tgtgatcccaaggagcccattaaagtttgcactcgattcagagctcggattctcattttt
aatattgaggttccaatcactaaaggattccctgtgcttttacactatcaaaccgtaagt
gaacctgctactattagaagattattgagtgtcctgcacaaaagcactggtgaagtgaca
aagaaaaagcctaagttcctgactaaaggccagaatgctttaatagaactacagactcaa
aggcctgttgctctagagttgtataaagattttaaagagcttgggagatttatgttacgc
tacagtggttctactattgctgcaggagttatcacagagattaaagaatga

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