Cygnus atratus (black swan): 118244202
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Entry
118244202 CDS
T09349
Symbol
THBS2
Name
(RefSeq) LOW QUALITY PROTEIN: thrombospondin-2
KO
K04659
thrombospondin 2/3/4/5
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04145
Phagosome
cata04510
Focal adhesion
cata04512
ECM-receptor interaction
cata04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118244202 (THBS2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118244202 (THBS2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
118244202 (THBS2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118244202 (THBS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118244202 (THBS2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cata04147
]
118244202 (THBS2)
00536 Glycosaminoglycan binding proteins [BR:
cata00536
]
118244202 (THBS2)
Membrane trafficking [BR:
cata04131
]
Endocytosis
Phagocytosis
Opsonins
118244202 (THBS2)
Exosome [BR:
cata04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118244202 (THBS2)
Exosomal proteins of colorectal cancer cells
118244202 (THBS2)
Exosomal proteins of bladder cancer cells
118244202 (THBS2)
Glycosaminoglycan binding proteins [BR:
cata00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118244202 (THBS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
TSP1_CCN
EGF_3
TSP1_ADAMTS
Laminin_G_3
EGF
cEGF
Motif
Other DBs
NCBI-GeneID:
118244202
NCBI-ProteinID:
XP_035394906
LinkDB
All DBs
Position
3:complement(76308927..76341886)
Genome browser
AA seq
1182 aa
AA seq
DB search
MPGVMVQRSGLLWLAVLITLWVSSDAQDGDKEEENTFDLLQISNINRKTVGAKLFRGPDP
TIPAYRFIRFDHIPPFKPEKXKKIVKLIRQNEGFILSATLRQDRQSRGTILALEGPGISE
RQFEIISNGRANTLDLIYWVDGFQNVISLEDVDLADSQWKNLTVQVTGENYNLYVGCDLI
DSFILEEPFYEQLKAESSRMYVAKGSIRENHFRGLLQNIQLIFDTSIEDVLRKKGCQRSQ
STEVNTINESTEILHLSPAVTTEYVGEKPEKKAEFCDRSCEELGTMFTELTGLRIVVNNL
ADNLQKVSEENQIMWELIGPNKTLKNQSVCWQDGRVFADNESWIVDSCTKCTCQDSKIVC
HQITCPPVSCADPSFIEGECCPVCSHSDDSEEGWSPWSDWTKCSVTCGSGTQMRGRSCDV
TRSACTGPHIQTRLCSFKKCDHRIRQDGGWSHWSPWSSCSVTCGIGNITRIRLCNSPIPQ
MGGKNCVGNGRETEKCEKVPCPVNGQWGPWSPWSACTVTCGGGIRERSRLCNSPEPQYGG
KPCVGDTKQHDMCNKKDCPIDGCLSNPCFPGAECNSYPDGSWSCGPCPAGFLGNGTVCED
LDECIAVSDVCFKVNQVHRCVNTNPGFHCLPCPPRYKGSQPYGVGLEVAKTEKQVCEPEN
PCKDKTHSCHKSAECIYLGHFSDPMYKCECRTGYAGDGRICGEDSDLDGWPNNNLVCAAN
ATYHCVKDNCPLLPNSGQEDFDKDGKGDACDEDDDNDGVEDDKDNCPLLFNPRQFDYDKD
EVGDRCDNCPYVHNPAQIDTDNNGEGDSCAVDIDGDDIFNERDNCPYVYNTDQSDTDGDG
VGDQCDNCPLMHNPDQTDADNDLVGDQCDNNEDIDEDGHQNNQDNCPYIPNANQADHDKD
GKGDACDPDDDNDGIPDDRDNCRLRYNPDQEDSDGDGRGDICKDDFDNDNVPDIYDVCPE
NNAISETDFRKFQMVPLDPKGTAQIDPNWVIRHQGKELVQTANSDPGIAVGYDEFSSVDF
SGTFYVNTDRDDDYAGFVFGYQSSSRFYVLMWKQVTQTYWEDKPTRAYGYSGVSLKVVNS
TTGTGEHLRNALWHTGNTPGQVRTLWHDPKNIGWKDYTAYRWHLVHRPKTGLIKVLVYEG
KQVMVDSGPIYDTTFAGGRLGLFVFSQEMVYFSDLKYECRDA
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgccaggagttatggtgcagaggagtgggctgttgtggcttgctgtcttgataaccctg
tgggtttcctcagatgctcaggatggtgacaaggaagaggagaatacctttgatttactt
caaatcagtaatataaaccgaaagacagttggagcaaaattgtttcggggtccagatccc
actatcccagcataccgtttcattcggtttgaccatatacctccatttaaaccagagaag
nttaaaaagattgtcaaactcatacggcaaaatgagggctttatcctttcagccaccctg
agacaggacaggcaatctagaggcaccatccttgccttagagggtcctggcatcagtgag
aggcagtttgagataatttccaatggccgagccaacaccctggacctcatctattgggtg
gatggcttccagaacgtgatttccctggaagacgtggaccttgctgactcgcaatggaag
aacctcactgtgcaagtaacaggggagaactacaacctctatgttggctgtgaccttatt
gacagcttcattctggaggagcctttctatgaacagctgaaagcagagagcagcagaatg
tatgtagcaaaagggtccattcgggagaatcacttcaggggtctcttgcaaaatattcag
ttaatctttgatacttcaatagaggatgttctgcgtaaaaaaggatgccagaggagccag
tcaactgaagtgaacaccatcaacgagagcactgaaatacttcacttgagccctgctgtc
acaaccgagtatgtgggtgaaaaaccagagaagaaggctgagttctgtgaccgctcctgt
gaagagctgggaacaatgttcactgagctcactggcctgcgcattgtggtgaataactta
gctgataatctccaaaaagtgtctgaagagaaccaaattatgtgggaattgattgggcct
aacaaaacactcaagaaccagtctgtttgctggcaggatggccgtgtctttgcagataat
gaaagctggattgtagatagctgcacgaagtgcacctgccaggattctaaaattgtatgc
catcaaataacctgcccaccagtctcatgtgctgatccatcttttattgaaggtgaatgc
tgcccggtctgctcacactctgatgacagtgaggaaggctggtcaccctggtcagactgg
acgaagtgctcagttacctgtggctctgggactcagatgcgaggaaggtcatgtgatgtc
accaggagtgcttgtacaggcccacacatccaaacaaggctgtgtagcttcaagaaatgc
gaccatcgcatacgtcaagatggtggctggagtcactggtctccctggtcttcctgttca
gttacctgtggaataggaaatatcactcgcatccgcctctgcaattcccctatcccccag
atgggtgggaaaaactgtgtgggaaatgggcgtgaaacagagaaatgtgaaaaggttcca
tgcccagtgaatggccagtggggtccttggtctccatggtctgcttgtactgttacctgt
ggaggaggaatccgtgagaggtctcgcctctgtaacagtccggagccacagtatggagga
aagccatgtgtgggagataccaaacaacatgatatgtgcaataagaaggattgcccaatt
gatgggtgtttgtcaaatccctgctttcctggagcagaatgcaacagctacccagatggg
tcttggtcatgcgggccatgtcccgcaggtttccttggcaatggtacagtctgtgaggat
cttgatgagtgtatagctgtgtcagatgtttgctttaaggtgaatcaggttcatcgctgt
gtgaacacgaatccaggtttccactgcttgccatgtcctccacgctataaaggaagtcag
ccctatggggtaggactggaagttgccaagacagagaagcaggtctgtgaacctgagaat
ccatgcaaggacaagacacacagctgccataagtctgcggagtgcatctatctaggccat
ttcagtgatcctatgtacaaatgtgaatgtaggacaggttatgctggtgatggacgcatc
tgtggtgaggattctgatttggatggctggccaaataacaacttggtctgtgctgctaat
gctacataccactgtgtgaaggataactgtccccttttgcctaactctggccaagaggac
tttgataaagatggcaaaggagatgcctgtgatgaggatgatgacaatgacggtgttgaa
gatgacaaagacaattgccctcttttgttcaaccctcgtcagtttgattatgacaaggat
gaagttggtgaccgctgtgataattgcccctatgtgcacaaccctgctcagattgacaca
gataataatggggagggtgactcgtgtgctgtggatattgatggagacgacatttttaac
gaacgagataattgtccttacgtctataacacagaccagagcgatacagatggtgatgga
gttggtgatcagtgtgataactgtccattgatgcataatccagaccagactgatgcagat
aatgaccttgttggtgaccagtgtgacaacaatgaagacatagatgaagatggccaccag
aacaaccaagataactgcccttacatccccaatgctaaccaggctgaccatgataaagat
ggtaaaggggatgcctgtgatcctgatgatgacaacgatggtattccagatgacagggat
aattgccgcctcagatacaaccctgaccaggaggattctgatggtgatggcagaggtgat
atttgcaaagatgactttgacaatgacaatgtcccggatatttatgatgtatgccctgaa
aacaatgccatcagtgaaacagatttcagaaaattccagatggtccctctggacccaaag
ggaacagctcagattgatcccaactgggttattcgccatcaaggcaaggaactggtgcag
actgccaactctgatcctggaatagcggtgggttacgatgagttcagctccgttgacttc
agtggcacgttttatgttaacacagaccgtgacgatgactatgctggctttgtgtttggc
taccagtccagcagtcggttttatgttctgatgtggaagcaggtcactcagacctactgg
gaggacaaacctaccagggcttatggctattctggtgtgtcactcaaggtagtgaattca
acaactggtactggtgaacacttgagaaatgctctctggcacactggaaacacccctgga
caggtgcgtactttgtggcatgatcccaagaacattggctggaaagattatactgcatac
aggtggcatttggttcataggcctaaaacaggactaataaaagttttagtttatgaaggg
aagcaagtcatggtggattctggaccaatctatgatacaacctttgctggtggacgattg
ggtctttttgtcttctctcaagagatggtctatttctctgatctcaaatatgaatgcaga
gatgcttga
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integrated database retrieval system
