Cygnus atratus (black swan): 118244226 Help Entry 118244226         CDS       T09349                                  Symbol VPS39 Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism cata  Cygnus atratus (black swan) Pathway cata04140   Autophagy - animal cata04142   Lysosome biogenesis cata04148   Efferocytosis cata05132   Salmonella infection Brite KEGG Orthology (KO) [BR:cata00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome biogenesis     118244226 (VPS39)    04140 Autophagy - animal     118244226 (VPS39)    04148 Efferocytosis     118244226 (VPS39)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     118244226 (VPS39)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cata04131]     118244226 (VPS39) Membrane trafficking [BR:cata04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     118244226 (VPS39) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C TPR_Vps41 Clathrin Beta-prop_RIG_2nd VPS18_solenoid_2nd WD40_like Lgl_C LIF1_N DUF4145 EcoR124_C Motif Other DBs NCBI-GeneID:  118244226 NCBI-ProteinID:  XP_035394930 LinkDB All DBs Position 5:31340113..31361605 Genome browser AA seq 875 aa AA seqDB search MHDAFEHVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIKKDMGCNRFEVTLEKSNK NFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHSDTGE EVLRMCVAVRKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVD GKGSIKELFPTGKQLEPLVAPVADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPIAME HQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGTNIIYVASNHFVWRLIPVSI ATQIQQLLQDKQFELALQLAEMKDDSDSEKRQQIHHIKNLFAFNLFCQKRFDESMQVFAK LGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPGLSGAELEKAHLALIDYLTQKRSQLVKKL NDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEE SEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENL HLVFSYSVWVLRDFPEDGLKIFTEDLPEVEALPRDKVLSFLIENFKSLAIPYLEHIIHVW EEIGADFHNCLIQLYCEKVQGLMKEYLNSLPADKTPVPAGEEGGDLGDYRKKLLLFLEKS SCYEPSRLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTNMAEDYCHKHYDRNK DGNKDVYLSLLRMYLSPPSVHCLGPIKMEVLEPQANLQAALQVLELHHSKLDTTKAINLL PANTQISEIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKV CTVCKKKIGNSAFARYPNAIVVHYFCSKEVNTLDT NT seq 2628 nt NT seq  +upstreamnt  +downstreamnt atgcacgacgcgttcgagcatgtgccgatcctggagaagctgccgctgcagatcgactgc ctggcggcctgggaagagtggctccttgttggtaccaaacaagggcatcttcttctttac aggatcaagaaagacatgggttgcaatagatttgaagtgacactagagaaatccaacaag aacttctcaaaaaagattcagcagattcatgttgtttctcagtttaaaattctggtcagt ctgttagaaaataacatttatgtccacgacctgttgacatttcaacaaatcactacagtt tccaaggcaaaaggtgcatctctcttcacttgtgatcttcagcattcagatacaggggaa gaggtgctgagaatgtgtgtggcagtgaggaagaagctacaactttatttttggaaggac agagagttccatgaactacagggggacttcagtgtacctgatgtacccaagtctatggcc tggtgtgaaaactctatctgcgtaggtttcaagagggactattatctgatacgggtggat ggaaaaggatccatcaaagaactgtttccaacagggaagcagttggaaccactggttgcc cctgtagcagatggaaaagttgcagttggccaagatgatctaactgttgtgctcaatgaa gaagggatctgtacccagaaatgtgccttgaattggacagatattcctatagccatggag caccagcctccctacatcattgctgttctgccaaggtatgtggagatccgcacatttgaa ccccgactgctggtacagagtattgagctacagagaccacgcttcatcacctctggaggg acaaatattatatacgtggcaagtaatcactttgtttggcgactcatcccagtgtccata gccacacagatccagcaacttcttcaggataaacaatttgagttggctttgcagttggca gaaatgaaagatgattcagatagtgagaagcgacaacaaatacaccacatcaagaacctc tttgccttcaacctcttctgtcagaagcgctttgatgaatccatgcaagttttcgccaaa cttggtacagatcccactcatgtgatgggtctgtatcctgacctcctgcccacagattac aggaaacagctacagtatcccaaccccctgccagggctctctggggcagagttggagaag gcacatttagctctgatagactacctaactcaaaaaagaagtcaactggtaaagaagcta aatgattctgaccatcaatccagtacttcgccccttatggaaggaacaccaacaatcaaa tccaaaaagaagctgctacaaatcattgataccacactattgaagtgttacctccataca aatgtagcacttgtggcaccattgctacgtctggagaacaatcactgccatattgaggag agtgagcatgtactaaagaaggcacacaaatacagtgagctgataatactgtatgagaag aaaggtctgcatgagaaagcattacaggtactggtggatcagtcaaagaaagccaactca cctttgaagggtcatgagaggacagtgcaatatctgcagcatttgggcacagagaacttg cacttagtattttcttactctgtctgggtgctaagagattttcctgaagatggactgaag atatttacagaagacctccctgaagtggaagctttgccacgagataaagtgctcagtttc ttgatagaaaactttaaaagtttggctattccttatctggaacacatcattcatgtctgg gaagaaattggtgcagactttcacaactgtctgatccagttgtactgtgagaaagtgcag ggcttaatgaaagaatatctcaactctttacctgcagataaaactccagtgcctgctggg gaggaaggaggagacttgggggattaccggaaaaaacttcttctttttttggagaagtct agctgttatgaacctagtcgactaattagtgactttccctttgatggtcttctagaagaa cgtgctctgctcttgggtcgtatggggaagcacgagcaagctctgtttatttatgttcat attttgaaggacaccaacatggctgaagactactgccataaacattatgacagaaacaaa gatggtaacaaagatgtctatctatctcttctccggatgtatctctccccgcctagtgtt cattgcttagggccaatcaagatggaagtgctggagcctcaagccaatctgcaggctgct ctgcaggtgttggagctgcatcacagcaaactggataccaccaaggcaataaaccttcta ccagcaaatacacagattagtgagattcgaatcttcctagagaaagtccttgaagaaaat gcgcaaaagaagagattcaatcaagtactgaagaatcttctccatgctgaatttctgagg gtccaggaggagcgaattttgcatcagcaagtgaagtgcataattacagaggagaaggtg tgcactgtatgtaaaaagaagataggcaacagtgcatttgcccgataccctaatgcaata gttgtgcattatttctgctccaaagaagtcaacacattggacacctga

DBGET integrated database retrieval system