Cygnus atratus (black swan): 118244373
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Entry
118244373 CDS
T09349
Symbol
NFKB2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04010
MAPK signaling pathway
cata04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118244373 (NFKB2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
118244373 (NFKB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118244373 (NFKB2)
Transcription factors [BR:
cata03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
118244373 (NFKB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
118244373
NCBI-ProteinID:
XP_035395188
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All DBs
Position
7:complement(20667112..20677242)
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AA seq
937 aa
AA seq
DB search
MLGLDGLLRPASSSAAGGRPRADMDEHFQPCLDGIDYDDFNFGTHMMEQKEPLMQTVEGP
YLIIIEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYIGMARIEVDLVTH
SDPPRVHAHSLVGKQCNEAGNCVAIVGPKDMTAQFSNLGVLHVTKKNMMEIMKEKLKQQK
IRNTNSLLTEAELREIELEAKELKKVMDLSIVRLRFTAYLRDSSGNFTLALQPVISDPIH
DSKSPGASNLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDFSP
TDVHKQYAIVFRTPPYHKPKIDRPVTVFLQLKRKRGGDVSDSKQFTYYPVVEDKEEVERK
RKKVLPQFPQHFGGGSHMGGAGGGAGGFGSGGGGNLSFPYSPGLAYNSIYSTGPHPVGGY
QGGVQMKAPSVDGDEGDRQVPTDSIYCKELQKHAQICHLWMLALARRNAHALLDYSVTAD
PRMLLAVQRHLAASQDENGDTPLHLAIIHEQTAVIKQLIDVVISIPSPQIINITNNLQQT
PLHLAVITKQPQVVQLLLQARADPTLLDRYGNSLLHLALHTGDEEMVRTLLTHLGAAAPY
LLRLPNFYGLLPVHLAVKAKSPACLDLLVRKGADVNAMEMQGGRTPLHLAVEMENLNMAT
HLVKKLGADVNSRTFAGNTPLHLAAGLGSPTLTKLLLKAGADVQNENDEPISPSSSEASS
DTDADPEEQEVSMELGEPSPATLCGPSPHPDPEEEQEETGPRPRRCHTPLDLTRSQKVRD
ILLQASQPGPKAELTAVPRAGNVLSLDNDALQGLEQLLNQDSSGSDWMELAKRLGLCSLV
ETYKDTPSPSVSLLRSYELAGGSLGGLLEALDSMGLRKAVRMLRKTEAQEKLQSTEIKED
SAYGSESVEEEQVPALALKPGPVPAGELPHSQQQQVH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgctggggctggacgggctgctgaggcctgcctcttcctctgcggccggcggccggccc
cgcgccgacatggacgagcacttccagccctgcctggatgggatcgactacgacgacttc
aattttggcacccacatgatggagcagaaggagcccctgatgcagacggtagaaggcccc
tacctcatcatcatcgagcagccgaagcagcggggtttccgatttcggtatggctgcgag
ggcccttcacacggggggctgccgggagcatccagcgagaaggggcgcaagacgtacccc
accgtcaagatctgcaactacatagggatggcccggatcgaggtggacctggtgacacac
agcgaccctccccgcgtccacgcccacagcctggtgggcaagcagtgcaacgaggccggc
aactgcgtggccatcgtgggacccaaggacatgaccgcgcagttcagcaacctgggtgtg
ctgcacgtcaccaagaagaacatgatggagatcatgaaggaaaagctgaagcagcagaag
attcgcaacacgaatagcctgctgacagaagccgagctgcgagagatcgagctggaggcg
aaggagctgaagaaggtgatggacctcagcatcgtgcggttgcgcttcaccgcctacctt
cgtgacagcagcgggaacttcacgctggccctgcagcccgtcatctcggaccccatccac
gacagcaagtcccctggagcttccaacctgaagatctcgcggatggataagacggcaggc
tcggtgcggggcggggatgaggtctacttgctgtgcgacaaggtccagaaagatgacatc
gaggtgcgcttctacgaggatgatgagaacggctggcaggccttcggggacttctccccc
acggacgtgcacaagcagtacgccatcgtcttccgcacgcccccctaccacaaacccaag
atcgaccgtcctgtcaccgtcttcctgcagctgaagcggaagcgagggggggacgtgagc
gactcgaagcagttcacctactaccccgtggtggaagataaggaggaggtggagaggaag
cgcaagaaagtcctgccccagtttccccagcactttggtgggggctcgcacatgggggga
gccggcggcggtgccgggggcttcggatcgggaggaggtgggaacctcagcttcccctac
tcgcctgggctggcgtacaacagcatctactcgaccggcccgcaccctgtgggggggtac
cagggcggcgtgcagatgaaggcccccagcgtggacggggatgagggcgacaggcaggtg
cctacggacagcatatactgcaaggagctgcagaagcacgcccagatctgtcacctgtgg
atgctggccctggcgcgccgcaacgctcacgccctgctcgactactcggtcaccgcagac
ccccgcatgctgctggctgtccagaggcacctggccgcctcgcaggacgagaacggggac
acgcctttgcaccttgctattatccatgagcagacagctgtgatcaagcagctgatcgac
gtggtcattagcatccccagccctcagatcatcaacatcaccaacaacctgcagcagacg
ccgctgcacttggcggtcatcaccaagcagccccaggtggtgcagctcctgctgcaagcc
cgtgcagaccccaccttgctggaccgctacggcaattccctgctgcacctggcgctccac
acgggcgatgaagagatggtgaggacgctgctgacccacctgggtgcggctgccccgtac
ctgctgcgcctgcccaacttttacggcctcctgcctgtgcacctggctgtgaaggcgaag
agcccggcctgcctggacctgctggtcaggaagggggcggacgtgaacgccatggagatg
cagggcgggaggaccccgctgcacctggccgtggagatggagaacctcaacatggccacc
cacctggtgaagaagctgggagcagatgtcaacagccggaccttcgctgggaacaccccc
ctgcacctggccgccggcctgggctcccccacgctcaccaagctgctcctcaaagcaggg
gcagatgtgcagaacgagaacgacgagcccatcagcccctcctcatcggaggcaagcagt
gacacggacgccgaccccgaggagcaggaggtgagcatggagctgggggagccgtcccca
gccacgctgtgtggccccagcccccatcctgaccctgaggaggaacaggaggagacaggg
ccccgaccgcgccgctgccacacgccgttggacctgacccgtagccagaaggtgcgggac
atcctcctgcaagcctcccagccaggccccaaggcggagctgaccgctgtcccccgtgca
gggaacgtcctgtccctggacaacgacgcgctgcagggcttggagcagctgctgaaccag
gacagcagcgggtctgactggatggagctggccaagcggctggggctctgcagcctggtg
gagacctacaaggacaccccctcgcccagcgtcagcctgctgcgcagctacgagctggcc
gggggcagcctgggagggctgctggaggcgctggactccatggggctgcgcaaggccgtc
aggatgctgcgcaaaaccgaggcgcaggagaagctgcagagcacagagatcaaggaggac
agcgcctacgggagcgagtcggtggaggaggagcaggtgcctgccctggccctgaagcca
gggccggtgccagcaggcgagctgccccacagccagcagcagcaggtgcactga
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