Cygnus atratus (black swan): 118244404
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Entry
118244404 CDS
T09349
Symbol
HPS5
Name
(RefSeq) BLOC-2 complex member HPS5
KO
K20191
Hermansky-Pudlak syndrome 5 protein
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118244404 (HPS5)
Membrane trafficking [BR:
cata04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
118244404 (HPS5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_HPS5
Beta-prop_HPS5
WD40_WDHD1_1st
PEP5_VPS11_N
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_WDR3_1st
Motif
Other DBs
NCBI-GeneID:
118244404
NCBI-ProteinID:
XP_035395263
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All DBs
Position
5:complement(36009836..36031469)
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AA seq
1143 aa
AA seq
DB search
MSEYCQPYASMASVPVIPDSYNHVLAEFECLDPLLSALRLDSSRLKCTCIAVSKRWIALG
SSGGGLNLIQRDGWKQRLFLTHKEGAISRVACCLHDEDYVAVATSQGLVVVWELNQERRG
KPERIYVSSEHKGRKVTALCWDTAALRVFVGDHVGKVSAIKINTSKQGKAAATFVMFPVQ
IITTVDSRVVQLDYLDGRLLISSLTRTYLCDTEREKFWKIGNKERDGEFGACFFPVGKNN
GNQQPLIYCARPGSRMWEVNFDGEVQSTHQFKQLLSSPPLPVVTLRMDPHCMTSSCSPQS
LSFPKLLYLTEHYVVTWTERGIYIFVPQSVQVLLWSEVKDIQDIAVYKSELFCLHTNGKV
VRLSLLLVDRCVDRLIRRGFWTLAARVSCLFQNSIISCRARKNLPLDKLEHLKSQLDAST
QQDLISRLEELILKVEPLDSACSSRRSSISSHESFSVLDSGIYRVISRRGSQSDEDSCSL
HSQTFSEDERLKEFPAHQEDEQVELDNVSHASVAVEADRSETFLPFSIPLSFRSPSPLVS
LQAVKESVSSFVRKTTEKIGTLHVSPDIRGRQEAKDDEQQQEVAVSLLASPQEERASEPQ
SCQLPEEDHLRDLKAATTEAVAKLQDPLVLLEPQCMRRVLREWLVYLEEKFGRREHFDSS
VRKSKTVCAEEQREVLEENLQVNLTGGDLAEKEPNSILEDYTESNDETCESQNVCENSTN
FKGPLGGCFQISPPCDLEPDVQKDLVELTTLCFELSVFSCGNGDSEESSDQGLPLAALST
LACRFIQNYFFLLDLKRLKQCIITTYANSPNVWETYIAGLKELTCHSSVALAMENEDMLK
ILKLLHDLGPWDDGPLLLVHAQRLYEKFGETALRPLIKFHPSISPSDIKQLCRNDPAHFL
AYLDSLVKSQPEDKRSSLLRSLLQPESIRLDWLCLAVSLDAPQRANTVDVEGNPRPRSHL
FTWGYSQLILLLVKLPADFVTKKKMADICKSHGFWPGYLFLCLELDRRIEAFTNIAHLDD
LSLLNEEDGSIPETIEEWKFLLHLAQNHSTVFHQHGPQNGNAASNGSPSWPNCITVENIA
LLLAKAIGPNRALPLLQECGVMLELSERFTGVCEILRIAEKRQRALIQAMLDRCDRFLWS
QQA
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtactgccagccttatgcatctatggcctctgtgccagtcattccagactct
tacaaccatgtactggcagagtttgaatgtttggatccgttgctttctgcactcaggctg
gattctagtcgtctgaagtgcacgtgtatagctgtgtcgaagagatggatagctctaggc
agctcaggaggaggactgaatcttatacagagagatggttggaagcaaaggctctttctt
actcataaggaaggtgccatttcccgagttgcctgctgtttgcatgatgaagactacgtt
gctgttgccaccagccaaggtctcgtagtagtctgggagctgaatcaggaacgtcgtggg
aaaccagaacggatttatgtttcctctgagcataagggcagaaaagtcacagctctatgt
tgggatacagcagccctccgtgtttttgtaggagatcatgtgggaaaagtatcagccatc
aagattaacacatcaaaacaaggaaaggctgctgccacttttgtgatgtttcccgttcag
attataaccactgtagattcccgtgttgttcagctcgattatttggatggaagactgctc
atatcttcacttacacgtacttatttgtgtgatacagagagagagaagttttggaaaatt
ggtaacaaagagagagatggagaattcggagcatgtttcttccctgttggaaaaaacaac
gggaatcagcagccactcatatattgtgcgcggcctggctcaaggatgtgggaggtgaac
tttgatggggaagtgcaaagcacgcaccagttcaagcagctgctctcatcaccgcctctc
cctgttgttactctcagaatggatcctcactgcatgacttccagctgctctccacaatct
ttatctttccccaagctactgtatttgactgagcactatgtcgtgacctggacggaaaga
ggcatttatatctttgttccccaaagtgttcaagtcttactctggagtgaagtaaaagat
attcaggatattgcagtttacaaaagtgaactgttctgtcttcatacaaacggaaaagtt
gtacgcctctcccttctgctggtagaccgctgcgtagatcgtctgataagaagagggttc
tggactcttgctgccagggtctcttgcctcttccaaaattcaataatttcttgcagagca
aggaagaatttgccactagacaagctggagcatttgaagtctcagctggatgcctcaact
caacaggatctcatttcacgtctggaggaactgatcttgaaggtggaacctctagattct
gcgtgcagcagtaggaggagtagcatttcatctcatgaaagcttcagtgtcttggactct
ggtatatatcgtgttattagtcgaagaggcagtcagtccgatgaagactcatgttctctc
cacagtcaaacattctcagaagatgagagacttaaagaatttcctgcacaccaggaagat
gaacaggtggaacttgacaacgtatctcatgcatctgtggcggttgaggctgaccggagt
gagactttcctcccattcagtattcctttgtcatttcgttccccatctcctctcgtctct
ctccaagctgtgaaagaaagtgtttccagctttgtacgcaaaactaccgaaaagattggc
acacttcatgtgagtcctgatattagagggaggcaagaagcaaaggatgacgagcagcag
caggaggtggctgtcagtcttctagcatctccccaggaagagagagcatcagagccacag
agctgccagcttccagaggaggatcatctaagagatctcaaggctgcaacaacagaagct
gtagccaaactccaggatcccctggttttgttagaaccacagtgcatgagaagggtttta
cgggaatggcttgtctatctggaagaaaaatttggcaggagagagcattttgattcctct
gttaggaagagcaagactgtatgtgctgaagaacagagggaagtcctggaggaaaacctg
caagtaaatctaactggtggagacctagcagaaaaagaaccaaatagtatcttggaagac
tacactgagagtaatgatgaaacttgtgaaagccaaaatgtatgtgaaaatagtactaat
ttcaagggacctttgggtggctgctttcaaatatctcctccatgtgacctagaaccagat
gttcagaaagatcttgtggagctgacaactctgtgttttgagctgagtgtattttcttgt
ggaaatggtgattcagaggaaagctctgatcaaggtctgccactagcagctttgtcgacc
ttggcttgtaggtttatacaaaactacttctttcttctggatttgaaaagactaaagcag
tgcattataaccacgtatgcaaacagccctaatgtatgggaaacatatatcgcaggattg
aaagaactaacttgtcacagttcggttgctttggcaatggaaaatgaagatatgttgaaa
atactgaaactgttgcatgacctggggccctgggatgatggccctctgttactggtacat
gctcaaaggctttatgaaaaatttggggaaacagctcttcggcccttgatcaagttccac
ccctctatttcaccttctgatatcaagcagctttgtaggaatgatccagctcacttttta
gcatatttagatagcctggtgaagtcacagccagaggataaaaggtcatctcttcttaga
tctcttctgcagccggaatcaatacgactggattggttgtgcttggcagtttctcttgat
gcaccacaaagagcaaatactgtggatgtggaaggaaatcccaggccacgatcacatttg
tttacatggggctacagccagctcattctgcttttggttaaactcccagctgattttgtt
acaaaaaagaaaatggcagacatctgtaaatcacatgggttttggcctgggtaccttttc
ctctgtttggagctggacagaagaatagaagcctttactaatattgctcatttggatgat
ctgagcctattgaatgaagaagatggttcaattccagagaccatagaagaatggaagttt
cttctgcatcttgcacaaaatcacagcactgtttttcaccaacatggcccacagaatggg
aatgctgccagcaatggtagccccagctggccaaactgcatcactgtggaaaacatagct
ctcttattagcaaaggccattggcccaaatcgtgccttgcctctattgcaagaatgtggt
gtgatgctagaattgtctgagagatttactggagtgtgtgagatactgagaattgctgag
aaaagacaaagagccctgattcaggccatgttggacaggtgtgaccggtttttgtggtct
cagcaagcatag
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