Cygnus atratus (black swan): 118244405
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Entry
118244405 CDS
T09349
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03022
Basal transcription factors
cata03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118244405 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
118244405 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cata03021
]
118244405 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
cata03400
]
118244405 (GTF2H1)
Transcription machinery [BR:
cata03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
118244405 (GTF2H1)
DNA repair and recombination proteins [BR:
cata03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
118244405 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
118244405
NCBI-ProteinID:
XP_035395264
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All DBs
Position
5:36031915..36053922
Genome browser
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSLNAGDNSAAPSKQDVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEREFWTRFFQSHYFHRDRLNTGSKD
LFAECAKLDEKGLKTMVSQGVKNPLIDLTALEDKTLDEGYGVASVASTSNASKSARESSN
AAIIKRFNHHSAMVLAAGLRKQEAQNDHYSETSSMDGNSRDSDFFQPPMKKVKLQESIEY
EDLAKNNSVKTIALNLKKSDRYYHGPTPIQSQQYATSQDIISSFHSIRQEMEAYVPKLTQ
VLSSGDATSTIAVLSPGGALMQGGTQQAINQMVPNDVQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMRSNLERFQVTKLCPFQEKIRRQYLSTNLISHIEEMLQTAYNKFHTWQ
SRRMLKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatcatctgaagaagtgttactgattgtaaagaaggtacgtcagaagaagcag
gatggggctctctaccttatggctgaaaggatagcatgggcacctgaaggcaaagaccgc
ttcacagtcagccatatgtatgcagacataaaatgccagaaaatcagtccagaaggtaaa
gctaaaattcagcttcagctagtattgcatgcgggggacacaaccaactttcacttctcc
aatgaaagcacagcagtgaaggagcgagatgctgtaaaggatcttcttcaacaactgttg
cccaaattcaaaaggaaagctaataaagaacttgaggagaaaaacagaatgctgcaagaa
gatcctgttttgtttcagctctataaagaccttgttgtgagccaagtaatcagtgctgaa
gaattctgggccaaccgtttaagcttgaatgcaggggataattctgcagcacctagtaag
caggatgtgggcatctctgcagcatttctggctgatgtacggcctcaaacagatggctgc
aatggtctgaggtacaatttgacttcagatatcatcgaatccatatttcgaacatatcct
gcagtaaaaatgaaatatgcagaaaatgttccacataacatgacagagagggaattctgg
acacgattttttcagtctcattatttccatcgggacagactcaatacaggctcaaaagac
ctctttgcagaatgtgccaaactggatgaaaaagggttaaaaacaatggtatctcaagga
gtaaaaaaccctctgatagatttaacagctttggaagataaaacattagatgaaggctac
ggtgttgcttctgtggcctctacatcaaatgcctcaaaatctgctagagaaagtagcaat
gctgccattataaaacgctttaatcatcatagtgccatggtccttgcagctggcctcaga
aaacaagaagcacaaaatgaccattacagtgagaccagcagtatggatggaaactccagg
gattcagatttctttcaaccaccaatgaaaaaggtgaaactacaggagtccattgaatat
gaagatttagcaaagaataatagcgttaaaactattgcactaaacttaaagaaatctgac
aggtattatcatggtccaactccaattcaatcacagcaatatgcaaccagtcaggatata
attagttcttttcatagtattaggcaagaaatggaggcatatgtacccaaactaactcag
gttctttcaagtggtgatgctactagcactattgcagtcctgtcacctggaggagcactt
atgcagggtggaacacagcaagccataaaccagatggtgccaaatgacgttcagtctgaa
ctaaaacacttgtacgtggcagtaggggaactgctacgacacttctggtcctgctttcca
gttaacacgccattcctagaagaaaaggttgtgaaaatgaggagcaacttggaaagattt
caggtgacgaagctctgcccattccaagaaaagattcgcagacagtatttaagcacaaat
ttgataagtcatatagaagagatgctgcagacggcctacaataaattccatacatggcag
tcccgccgtatgctgaagaagacgtga
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