Cygnus atratus (black swan): 118244430
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Entry
118244430 CDS
T09349
Name
(RefSeq) serine/arginine-rich splicing factor 5-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03040
Spliceosome
cata05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118244430
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118244430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cata03041
]
118244430
Spliceosome [BR:
cata03041
]
Common components
Common spliceosomal components
SR proteins
118244430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
SET_assoc
Motif
Other DBs
NCBI-GeneID:
118244430
NCBI-ProteinID:
XP_035395314
LinkDB
All DBs
Position
5:complement(28407173..28422943)
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AA seq
279 aa
AA seq
DB search
MSGCRVFVGHLSSRARERDVEKFFKGYGRIREIHLKNGFGFVEFEDHRDADDAIYELNGK
ELCDERVTIEHARARRGRGRFPQRFSYYQSTSGSSRYGPPVRTEHRIIVENLSSRISWQD
LKDVMRKAGEVTYVDAHRNNRNEGVVEFASYSDMKSALEKLDGTELNGRRIKLIEDHRRH
RSRSRSRSYSRSRSKSKSTGSSRSYSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRT
PKKSYSQKSHRSSLLASSPSPSSSKRKSRSRSSSAHSRS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctgccgtgtctttgttggtcacttaagctcacgtgctcgggaacgggatgtg
gaaaaattcttcaaaggatacggacgcatacgagaaatacatctaaaaaatggatttgga
tttgtggaattcgaagaccacagggatgctgatgatgcaatttatgaactaaatggtaaa
gagttgtgtgatgaaagggttacaattgagcatgctcgagcccgaagaggaaggggcaga
ttcccgcaacggttcagttattaccagtcgacgagcggatctagccggtatggacctcct
gttcgtactgaacacaggatcatagttgaaaacctttcgtcccgtatcagctggcaggac
ttgaaagatgtcatgagaaaggcaggggaggtcacctatgtggatgcacacagaaacaac
aggaatgaaggggttgtggaatttgcatcttacagtgatatgaagagtgcgctggaaaaa
ttggatggcactgagctgaatggacgcagaattaaactgattgaagatcacagaaggcat
agaagcagatctcgatcaaggagttactcaagatctcgcagcaaatccaagtctaccgga
tcttccagatcatacagccggtccaggtctaggtcaagatcaaggtccagatccaggtct
aggtccaggtctcgctcgcgatcccggtcccgatcccggtctcgctctcgcagccgtaca
cctaaaaagagctattcccagaagagccaccgctccagcttgctagcttcttccccgtct
ccctcttcttctaaaagaaaatctcgttctaggtcgagctctgctcatagccgtagttaa
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