Cygnus atratus (black swan): 118244434
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Entry
118244434 CDS
T09349
Name
(RefSeq) LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HERC3
KO
K22372
E3 ISG15--protein ligase [EC:2.3.2.-]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118244434
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
118244434
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
118244434
NCBI-ProteinID:
XP_050566406
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Position
4:complement(11824795..11846080)
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AA seq
863 aa
AA seq
DB search
MALSRGGELFTWGQNAYGQLGVGRQVTLTPKPQLVKGLKGIPLAQIAAGGAHSIAVSLSG
AVYSWGKNDFGQLGLGHTEDKDYPSYIEALEHWKTVFISCGADHTAVLSKDGLVCTFGAG
GAGQLGHNSTRNELTPRVVAELWGARVSQVACGRQHTLVYVPSLDKVYLFGSDEGQLGNE
KAANQLIPLPINSPVDNGKFCQENNTSQKVIKTTSEEKESIVLCLKERNSYPLNGIATLK
ENKVDAWISNSHPKHWETTKKNIRLIFSSEACINGSFLEKRDKHFKTSKEISGVDMREVQ
CFYNKISNKTLIYQEVQNGIKNLLPSLSSSPISPENFRVYLILPFLLQGDDESSYCSLRL
LAKAILRLRQKDRKALECLWSNLDTSLFKNLVHIYQKLSQNTLHRLIRKNGVLQIPLFEH
ETTLRLHETLQILNILYQVNTRAGFRLQENNFYVSEVKKIIKWLFNMKQFMIFQRSLGML
TKYPCIFDMHDKILVHYLECNSLYTCCNFLGWIYEKPYILAVRREHLLDDIRHHLITAQN
DQFSRNLKVLFVGEEGRDDGGLSQELFAIAARAFSDPRSGAFRHFSSRLVWFPSQVPSHD
NTFVLIGTLFGMALYNKCHAPFPFPSALFKKMLNITPTLEDLRELMPAVARNLQNILNEE
SEDELESQHMTFVQLEEGGSVVELKENGTNIPVTKHNRKEFVDLYVNYIFNESVRKPFED
FMQGFLRGCPARSWKMFLPVELQVVLLGHATYNWRLLQKNVMYGGYQESHQTIKNFWTVF
FKLPEEKKKKFLAFLSGSDRIPASGLEYFSFAIQDPGWENPDNFFPLANTCSHILFLPRY
SSKEILEKKFLCAIEHDEGFAFK
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcactgtccagaggaggtgagctctttacctggggccagaatgcctatggacagctt
ggagtggggagacaagtcacactcacccccaaaccacagctggtgaaaggactaaagggc
atcccacttgctcaaattgctgctggaggagctcacagcattgctgtgtcactctctgga
gccgtgtactcctggggaaagaacgactttgggcagctgggactcggacacacggaagac
aaggactacccatcatacattgaagcattagagcactggaagactgtatttatctcatgt
ggggcagatcatactgcagttctctccaaggatggcttggtgtgcacatttggagcagga
ggggctggccagcttggtcacaactccacccggaatgaactaacacctcgtgtagtggct
gagctgtggggagcaagagtttcgcaggttgcctgtggaagacagcacaccctggtctat
gtcccctccttggacaaagtctatttatttggttctgatgaaggacagctgggaaatgag
aaagcggctaatcaattgataccacttcccatcaattcaccagtggataatggaaaattc
tgtcaggaaaacaacacctcacaaaaggtgattaaaactacgtcagaagaaaaggagagt
attgtcctttgcttgaaggaaaggaattcctatcctttgaatggaattgcaactctgaag
gagaacaaagtggatgcatggatttctaattcccatccaaaacactgggaaactacaaaa
aagaatatcagactgatcttttcatctgaggcttgcatcaatggaagcttcctggagaag
agagacaaacatttcaaaacttccaaagaaatctcaggtgtagacatgagagaagtgcaa
tgtttttataacaagatcagcaacaagacattaatctaccaggaggtgcaaaatggaatt
aagaatttgctgccatcattgtcttcctctcccatctcacctgaaaatttcagagtctac
ttgatcttgcctttccttcttcagggagatgatgagagctcttactgttctctcaggctg
ttagcaaaagccattttgaggctccggcagaaggaccggaaagctcttgaatgcctgtgg
tcaaatctagacacatcacttttcaagaatctggtccatatatatcagaagctttcccag
aacacactgcatcgattaatcaggaaaaatggagtgttgcaaatacctctctttgaacac
gagactactcttagactgcatgagactctgcaaatactgaatattctttaccaggtgaac
accagggctggcttcagactacaagaaaacaacttctatgtgtccgaagtgaaaaaaatc
atcaaatggttattcaacatgaaacagtttatgatatttcagaggtctctagggatgctg
accaaatatccatgcatctttgacatgcacgacaagatcttggttcattatttagaatgc
aatagtctgtacacgtgctgcaactttctaggctggatatacgagaaaccctatattctt
gctgtcagacgagaacaccttctggatgacatacggcatcatttaataacagcacaaaat
gatcaattcagcaggaatttaaaagtgctgttcgtgggcgaggaagggcgggatgatggc
gggctgtcccaggagctcttcgctatcgccgccagggccttcagcgacccccggagcggt
gccttccgccacttctcctcccggctggtctggttccccagtcaggtgccaagccacgac
aacacttttgtcctgattgggaccctgtttgggatggctttgtataacaaatgccatgct
cccttccccttccccagcgctctcttcaagaagatgttgaacatcacacccaccctggag
gatctgagggagctgatgccagcagtagccaggaatcttcagaatattttgaatgaagaa
tctgaggatgagcttgagagccagcacatgaccttcgtgcaactagaagaaggaggttct
gtggttgagcttaaagaaaatggtaccaacattcctgtcactaagcataacaggaaggaa
tttgttgacttatatgtgaattacatattcaatgaatcagtacggaagccatttgaggac
tttatgcaaggttttttaagaggctgcccagctagaagctggaagatgtttctccctgtt
gagctccaagttgttctcctgggacacgcaacatacaactggcgtctgctgcaaaagaac
gtgatgtacggaggctatcaggagtcacatcaaaccatcaagaatttttggactgtgttt
ttcaagctcccagaagaaaaaaagaaaaagtttcttgcttttttgtcaggatctgatcga
atccctgcctctggactggaatattttagctttgctattcaagatcctggatgggaaaat
ccagataatttttttcctctagctaatacctgcagccacattctcttcctccccaggtac
agcagtaaggaaatactggagaaaaagttcctctgtgccatagagcatgatgaaggtttt
gcctttaagtga
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