Cygnus atratus (black swan): 118244578
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Entry
118244578 CDS
T09349
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04136
Autophagy - other
cata04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118244578 (ATG13)
04136 Autophagy - other
118244578 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118244578 (ATG13)
03029 Mitochondrial biogenesis [BR:
cata03029
]
118244578 (ATG13)
Membrane trafficking [BR:
cata04131
]
Autophagy
Autophagosome formation proteins
ULK complex
118244578 (ATG13)
Atg1 complex
118244578 (ATG13)
Mitochondrial biogenesis [BR:
cata03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
118244578 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
118244578
NCBI-ProteinID:
XP_035395544
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All DBs
Position
5:33656488..33679173
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AA seq
479 aa
AA seq
DB search
MDTDLSSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRAGEDNGAV
YPSVEDSQEVCTTSFSTSPPSQLIGPGKEGGVPPVPSQPAHGTQADQERMCTPLDGVHYS
AATPSSSEDTETVSNSSEGKCGSPHDLLETIFIRKVGAFVNKPINQVTMANLDIPFAMFA
PKNVELEDNDPMVNPPDSPETESPLQGSLHSEGSSGSSTGNTHDDFVMIDFKPAFSKDDI
LPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVKEFDAFVETLQ
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggacactgatctcagttcccaggacaggaaggacctggacaagttcatcaagtttttt
gctctaaagacggtacaagtaattgtccaggcccgacttggagagaagatctgtacccga
tcatcatcctccccaacaggctctgactggttcaatttggccatcaaagatataccagag
gttactcatgaagcaaagaaagccttggcaggacagctgcccgctgttggacggtctatg
tgcgtggagatttctctcaaaacctcagagggggattccatggagctagaaatttggtgt
ctagaaatgaatgaaaagtgtgacaaagaaatcaaagtttcatacaccgtatacaacagg
ctgtctctactactgaagtctttgctagctataaccagggtaactccagcctacaggctc
tcaaggaaacaaggccatgaatatgtgatactgtacaggatatattttggtgaagtgcaa
ctgagcggcttgggagaaggtttccaaacagttcgtgttgggacagtgggtaccccagtt
ggcaccatcactttgtcttgtgcctacagaatcaaccttgctttcatgtcaaccaggcag
tttgagaggacccctcctatcatggggattatcattgatcactttgtggaccgtccctat
cccagctcttcgcccatgcacccctgcaattacagagctggtgaggacaacggtgcggta
tacccctcagtagaagattcccaagaagtgtgtaccacatcattctccacctctcctcca
tctcagttgattggtccaggcaaagaggggggagttcccccagttcctagccagccagca
catggcacccaagctgaccaagagcggatgtgcaccccgctagatggagtccactactca
gcagctactccttccagtagtgaggacacagaaacagtatcaaacagcagcgaagggaag
tgtggctccccacatgaccttttggagaccatctttatccggaaagtgggagcttttgtc
aacaaacccattaaccaggtgaccatggccaacttagacattccttttgccatgtttgct
cccaagaatgttgagctggaagataacgaccccatggtcaatcctcctgactccccagaa
actgaatctcctctacaaggcagcttacactcagagggctccagtggcagcagcacaggg
aacacccatgatgactttgttatgattgactttaaaccagcattttcaaaagacgacatc
cttccaatggacctggggacattttaccgtgagtttcagaacccccctcaactcagcagc
ctctccattgacataggagctcagtccatggcagaggatttggactcattaccagagaag
ttggcggtccatgagaaaaatgtcaaagagtttgatgcctttgtagaaaccttgcagtga
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