Cygnus atratus (black swan): 118244696
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Entry
118244696 CDS
T09349
Symbol
FEN1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03030
DNA replication
cata03410
Base excision repair
cata03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118244696 (FEN1)
03410 Base excision repair
118244696 (FEN1)
03450 Non-homologous end-joining
118244696 (FEN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cata03032
]
118244696 (FEN1)
03400 DNA repair and recombination proteins [BR:
cata03400
]
118244696 (FEN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cata04147
]
118244696 (FEN1)
DNA replication proteins [BR:
cata03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
118244696 (FEN1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
118244696 (FEN1)
DNA repair and recombination proteins [BR:
cata03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
118244696 (FEN1)
Exosome [BR:
cata04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118244696 (FEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
5_3_exonuc_N
HHH_5
XPG_I_2
Ariadne
Motif
Other DBs
NCBI-GeneID:
118244696
NCBI-ProteinID:
XP_035395726
LinkDB
All DBs
Position
5:complement(35426560..35429138)
Genome browser
AA seq
381 aa
AA seq
DB search
MGIHGLAKLIADVAPGAIRENDIKAYFGRKVAIDASMSIYQFLIAVRQGAEVLQNEEGET
TSHLMGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELAKRTERRAEAEKHLQEAQQAGEE
INIEKFSKRLVKVTQQHTDECKKLLMLMGIPYVEAPGEAEASCATLVKAGKVYAAATEDM
DCLTFGSPVLMRHLTASEAKKLPIQEFHLNRILQDLDLTWEQFVDLCILLGCDYCESIRG
IGPKRAVELIRQHKTIEEIVQHIDTKKYPLPENWLHKEAQKLFLEPDVVNPDDIELKWME
PNEEQLVQFMCVEKQFNEERVRNGVKRLSKSRQGSTQGRLDDFFKVTGSITSAKRKEPES
KGSAKKKAKTSNAAAKFKKGK
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggggatccacggcctggccaagctgatcgccgacgtggcgcccggcgccatccgtgag
aacgacatcaaggcgtacttcgggcggaaggtggccatcgacgcctccatgagcatctac
cagttcctgatcgccgtgcggcagggcgccgaggtgctgcagaacgaggagggcgagacc
accagccacctgatgggcatgttctaccgcaccatccgcatggtggagaacggcatcaag
cccgtgtacgtcttcgacggcaagccgccgcagctgaagtcgggggagctggccaagagg
accgagcggcgggctgaggccgagaagcacctgcaggaggcccagcaggccggagaggag
atcaacatcgagaagttcagcaagaggctggtcaaggtgacccagcagcacaccgacgag
tgcaagaagctgctgatgctgatgggcatcccctacgtggaggccccgggggaggcggaa
gccagctgtgccaccctggtgaaggcagggaaggtctacgcggccgccacggaagatatg
gattgcctgaccttcggcagtcccgtgctgatgcggcatcttactgccagtgaagctaag
aagctgcccatccaggagttccacctgaaccgtatcctgcaggacctcgatctgacctgg
gagcagtttgtggatctatgcatcctcctgggctgcgactactgcgagagcatccgcggc
atcgggcccaagcgggccgttgagctcatcagacagcacaaaaccattgaggagatcgtt
cagcacatagacaccaagaagtaccctctgcccgagaactggttgcacaaggaggcccag
aagctctttctagagccagacgtggtcaaccctgacgacatcgagctgaagtggatggag
ccgaacgaagagcagctcgtccagttcatgtgcgtggagaaacagttcaacgaggagcgc
gtccgcaacggcgtcaaaaggctgagcaaaagccgtcagggcagcacgcagggccggctg
gacgacttcttcaaggtgacgggctccatcacgtcggccaagcgcaaggagcctgagtcc
aaggggtcggcgaagaagaaagccaagaccagcaatgccgcagccaaattcaaaaagggg
aaataa
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