Cygnus atratus (black swan): 118244769
Help
Entry
118244769 CDS
T09349
Symbol
LRP5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04150
mTOR signaling pathway
cata04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118244769 (LRP5)
04150 mTOR signaling pathway
118244769 (LRP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118244769 (LRP5)
Membrane trafficking [BR:
cata04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
118244769 (LRP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
Vgb_lyase
EGF_LRP2
SGL
EGF
cEGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
118244769
NCBI-ProteinID:
XP_035395830
LinkDB
All DBs
Position
5:complement(38701902..38845545)
Genome browser
AA seq
1617 aa
AA seq
DB search
MEAAAPPPLLLLLLRLLAASLLRYQPGPAEASPFLLFANRRDVRLVDAGGTKLESTVVVS
GLEDAAAVDFQYSQGIVFWTDVSEEAIKQTYINQTGNVVQNVIISGLVSPDGLACDWIGK
KLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGETPRIERAG
MDSSTRKIIVDSDIYWPNGLTIDLDEQKLYWADAKLSFIHRANLDGSFRQKVVEGSLTHP
FALTLSGDTLYWTDWQTRSIHACNKRTGEKRREILSALYSPMDIQVLSPDRQPYFHTPCE
ENNGGCSHLCLLSPRDPFYSCACPTGVQLEDDGRTCKSGAEEVLLLARRTDLRRISLDMP
DFTDIILQIDNIRHAIAIDYDPVEGYIYWTDDDVRAIRRAYLDGSGAQTLVTSEINHPDG
IAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLNPVMGYMYWTDWGE
SPKIECAYLDGSERRVLVNTSLGWPNGLALDLEEDKLYWGDAKTDKIEVINVDGTMRKTL
LEDKLPHIFGFTLLGDYIYWTDWQRRSIERVHKIRASRDIIIDQLPDLMGLKATSVAKVF
GTNPCAENNGGCSHLCFFTPQETRCACPIGLELLSDMKTCIIPEAFLVFTSRAAIHRISL
ETNNNDVAIPLTGVKEASALDFDVSDNRIYWTDVSLKTISRAFMNGSSVEHVIEFGLDYP
EGMAVDWMGKNLYWADTGTNRIEVARLDGQYRQVLVWKDLDNPRSLALDPTKGYMYWTEW
GGKPRIVRAYMDGTNSITLVDKVGRANDLTIDYADQRLYWTDLDTSMIESSNMLGQEREI
IADDLPHPFGLTQYSDYIYWTDWNLHSIERADKTSGKNRTLIQGHLDFVMDILVFHSSRQ
DGLNDCVQNNGHCGHLCLAIPNGFRCGCAAHYTLDPNSRNCSSPTSFLLFSQKSAISRMI
PDDQQSPDIILPMHGLRNVKAIDYDPLDKLIYWVDGRQNIIKRAKDDGTQPFTVMSAPNQ
SQNPEKQPHDLSIDIYSHTLYWTCEATNSVNVHRLNGESIGMVLRGDHDKPRAIVVNAER
GYMYFTNMQERAPKIERAALDGTEREVLFTTGLIRPVALVIDNKLGKLFWVDADLKRIES
CDLSGANRVTLEDSNILQPMGLTVLGNHLYWIDRQQQMIERVEKTNGYKRTRIQGRIAHL
TGIHAVEELDMEEFSAHPCSRDNGGCSHICIAKGDGTPRCSCPEHLVLLQNLLTCGEPPT
CSPDQFTCATGEIDCIPMAWRCDGFPECDDQSDEDSCPICSASQFQCEKGQCIDAHLRCN
GEIDCQDKSDEVDCDTLCLPNQFRCASGQCILLKQQCDSFPDCIDGSDELICEKTKPASD
EPQPHSSAIGPVIGIILSLFVMGGMYFVCQRVVCQRYAGPNSPFPHEYVSGTPHVPLNFI
APGSSQHGTFTGISCGKSMISSMSLMGGSSGAPLYDRNHVTGASSSSSSSTKATFYPQIL
NPPPSPATDRSLYNAEMFYSSNIPSTTRSYRPYLIRGIAPPTTPCSTDVCDSDYTTSRWK
ANKYYIDLNSDSDPYPPPPTPRSQYMSAEESCPPSPATERSYFHLYPPPPSPCTDSS
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcggcgccgccgccgctcctgctgctgctgctgcgactcctggccgcctcc
ctgcttcgctaccagcccggcccggccgaggcatctcccttcctgctttttgccaaccgt
cgggacgttcgactcgtggatgctggaggcacgaagctggagtccactgtggtggtcagt
ggcttagaggatgctgctgcggttgacttccagtattcgcaaggcatcgttttctggaca
gatgtgagtgaagaagccatcaagcaaacttacattaaccaaactggcaatgtggtgcag
aatgtcatcatttctggtttggtttccccggatggcctggcatgtgattggattgggaaa
aaactttactggacagactcagaaaccaataggatagaagtagctaatctcaatggaaca
tctagaaaagtcctcttctggcaagaccttgatcagcccagggcaatagctttggatccg
gctcatggatacatgtattggactgactggggagaaacacccagaatagaacgagcagga
atggacagcagcacacgaaaaataattgttgattcagatatctattggccaaatggactc
acaattgatcttgatgagcagaaactttactgggctgatgcaaaattgagtttcattcac
agagcgaatctggatggttcctttaggcaaaaggttgttgaaggtagtcttactcatccg
tttgcactgacgttgtctggggacactttgtattggacggactggcagacgcgctccatt
catgcctgcaacaaacgaacaggagagaaaaggagagaaatattatctgccctgtattcg
ccaatggacatccaggtcttaagtcctgaccggcagccctactttcacactccatgcgaa
gaaaacaatggtggttgctcccatctgtgcctgctatctcccagagaccccttctatagc
tgtgcttgtcccactggtgtgcagctagaagatgatggcaggacatgcaaatcaggtgct
gaagaagtcttgctgcttgctagaaggacggacttgagaaggatttccttggacatgccg
gatttcactgacattattctgcagatagacaatatcagacatgcaatagccatagactat
gatcctgtggaaggctacatctactggactgatgatgatgtccgggcaattcgtcgggcg
taccttgatggttctggagcacagactctggtaacctcagaaatcaaccatccagatggt
attgctgtggactgggtggcaaggaacctgtactggactgacactggaacagaccgcatt
gaagtgacccggttgaatgggacatcaagaaagatccttatctcagaaaacctagatgaa
cctagagcaattgtgctcaatcctgtaatgggctacatgtattggacagactggggtgag
agtccaaagatagagtgtgcttatttggatggctcagagaggagagttctggtgaacacg
tccttaggttggcctaatggcttggcactggatcttgaagaggacaaactttactgggga
gatgcaaaaacagataaaattgaggtcataaatgttgatggaacaatgaggaaaaccctc
ctagaagataaacttccacatatatttgggttcacacttctaggagattacatctactgg
actgactggcagagacgaagcattgaaagagttcacaagataagggctagcagagacatt
attattgatcagctgccggacttaatgggccttaaagcaacaagcgttgccaaagtgttt
ggaactaatccatgtgcagagaacaatggaggctgcagtcatctatgtttctttacaccc
caggagaccaggtgtgcctgtcccattggccttgagctgttgagtgacatgaagacttgc
atcattcctgaagccttcttagttttcacaagcagagcagccattcataggatttccctt
gaaaccaataataatgatgttgctattcctcttactggagtcaaggaggcatctgctctg
gattttgatgtctctgataacagaatctattggactgatgttagtttgaagaccataagc
cgagctttcatgaacgggagctctgttgaacatgtgattgaatttgggctagattatcct
gagggaatggctgtagactggatgggaaagaacctgtactgggcagatactggaaccaac
cgaattgaagtagcccgcctggatggacagtataggcaggtccttgtgtggaaggacttg
gacaacccacggtctttggctcttgatcctaccaaagggtacatgtactggacagagtgg
ggaggtaaacctaggattgttcgagcatatatggatggaacaaacagcatcactttggtg
gataaagtgggtcgtgccaatgacctcactattgattatgcagaccaacggctatattgg
actgacttagacaccagcatgattgaatcgtcaaatatgctaggacaagaacgagaaatc
atagcagatgatctacctcatccattcggattaacccaatacagtgactacatctactgg
acagactggaatcttcacagcatagaaagagcagacaagaccagtgggaagaaccggaca
cttattcagggccatctggattttgtgatggatatattggtctttcattcttcacgtcag
gatggcttgaatgattgtgtgcaaaataatggccattgcggtcacttgtgccttgccata
ccaaacggatttaggtgcggctgtgctgctcactatacattggatcccaacagcaggaac
tgtagttcccctaccagtttcctgttatttagtcagaagtctgcaatcagccgaatgata
ccagatgatcagcaaagtccagatatcatcctgcctatgcatggtctaaggaacgtgaag
gctattgattatgatcccttagataaattgatctactgggtagatggacgtcagaatatt
ataaaaagagccaaagatgatggcactcagccttttactgtcatgagtgctccaaaccaa
agtcagaatcccgagaagcagccacacgacctcagcattgatatatacagccatacctta
tactggacctgtgaggccacaaattcagtcaatgtccacagactgaacggcgagtcaatt
gggatggtgctgcgtggagatcacgacaagcccagagccattgtggtgaatgcagagcga
gggtacatgtacttcaccaacatgcaagagcgagctcccaagattgagcgcgcagccctc
gatggcacagagagagaagtgctttttaccactgggttgatccgccccgtagcactggtg
attgacaacaaacttggaaagcttttctgggtggatgcagatctgaagcgcatcgaaagc
tgtgacttgtcaggtgctaaccgcgtgaccctggaggactccaacatccttcagccgatg
ggactgacggtgctggggaatcacctgtactggattgatcgtcagcagcagatgattgaa
agagtggagaaaactaacgggtacaaaaggactagaattcaaggccgaatcgctcaccta
acaggcattcatgctgtggaagaactcgatatggaggaattctctgcacatccatgctcc
cgtgacaatggtggatgttcgcacatctgcattgccaaaggggatgggactccaagatgt
tcatgtccagagcaccttgtgcttctacagaatctcttaacttgtggagaacctccaact
tgttccccagaccaatttacgtgtgcaactggagaaatcgactgtatcccaatggcatgg
cgatgtgatggatttccagagtgtgatgaccagagtgatgaagatagttgccccatatgc
tctgcatcccagttccagtgtgagaaaggacaatgtattgatgcacatctgcggtgtaat
ggagaaattgactgccaagataaatctgatgaagtggattgtgatacactttgtctgccc
aatcagttccgatgtgccagtggccagtgcatcctcctgaagcaacagtgtgactccttt
ccagattgcatcgatggatctgatgagctcatttgtgaaaaaacaaagccagcctcagat
gaaccacaaccccacagcagtgccatcggtcctgtcatcgggataatactgtccctattt
gtcatgggaggaatgtactttgtttgccagcgagtggtgtgtcagcgctatgctgggccc
aatagcccctttccacatgagtatgtcagtggaacccctcacgtccctcttaattttatt
gctccaggaagttctcagcatggcacttttactggcatctcttgtggaaagtctatgatt
agctccatgagcctcatgggaggaagcagtggtgcccccttgtatgacagaaatcacgtt
actggagcttcttctagtagctcatccagcactaaagccactttctaccctcagatcttg
aacccacctccgtccccagctactgatcgctccctgtataatgcagagatgttttattcc
tcaaacattccttcaaccacgagatcttacaggccttaccttatacgagggatagctcca
cccacaaccccatgcagcacagatgtgtgtgacagtgactatactaccagccgatggaag
gccaacaaatactatatagatttaaattcagactcagacccttatccccctccacccaca
cctcgcagccagtatatgtcggcagaagaaagttgccctccgtctcctgccacagaacga
agctattttcacctctacccccctccaccctctccttgtacagactcctcatga
DBGET
integrated database retrieval system
