KEGG   Cygnus atratus (black swan): 118244816
Entry
118244816         CDS       T09349                                 
Symbol
BICC1
Name
(RefSeq) protein bicaudal C homolog 1 isoform X1
  KO
K18756  protein bicaudal C
Organism
cata  Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:cata00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cata03019]
    118244816 (BICC1)
Messenger RNA biogenesis [BR:cata03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     118244816 (BICC1)
SSDB
Motif
Pfam: KH_BICC1 KH_1 KH_BICC1_1st SAM_1 KH_Vigilin SAM_2 KH-I_KHDC4-BBP KH_Mug60-KHD4 KH_2 KH_N4BP1_1st SAM_Ribosomal_mS41 SpoIIIAH
Other DBs
NCBI-GeneID: 118244816
NCBI-ProteinID: XP_035395971
LinkDB
Position
7:complement(28940631..29058755)
AA seq 978 aa
MAAQCDPLSGYLQQPLSDPGSNSERSTDSPVPGSEEDSAGPPRPLHSPEWGEERFRVDRK
KLEAMLQAAAEGKGKSGEDFFQKIMEETNTQIAWPSKLKIGAKSKKDPHIKVSGKKENVK
EAKEKIMSVLDTKSNRVTLKMDVSHTEHSHVIGKGGNNIKKVMEETGCHIHFPDSNRNNQ
AEKSNQVSIAGQPAGVESARVRIRELLPLVLMFELPIAGILQPIPDPNSPTIQHISQTYN
ISVSFKQRSRMYGATVIVRGSQNNTSAVKEGTAMLLEHLAGSLASAIPVSTQLDIAAQHH
LFMMGRNGSNIKHIMQRTGAQIHFPDPSNPQKKSTVYLQGTIESVCLARQYLMGCLPLVL
MFDMKEEIEVEPQFITQLMEQLDVFISIKPKPKQPSKSVIVKSVERNALNMYEARKCLLG
LESSGVTIPSNPSTVSCPVGLSCPGLDILSSAGLGLTGLGLLGPTALSVNTSTTPNSLLN
ALNSSVSPLQSPSSATPSPTLWATSLANTNATGFSAIPHLMIPSTAQATLTSILLSGVPS
YSQNTPSPPPGLTPVEVHVNGLQSESKKGSPSLNGHVKTSNIKYAALSATSLGENVLSTN
HSDSARQTSTHGASEQVAAKSNSAEGCNDAFVEVGMPRSPSHSANTSDLKQMMSSSKQAC
TKRQTVELLQGTKNSHLHTTERLLSDAELSASESPMADKKAPGSERAAERAAAAQQNSER
ARLAQPSYVNMQAFDYEQKKLLATKAMLKKPVVTEVRTPTNTWSGLGFSKSMPAETIKEL
RRANHVSYKPSMTTTYEGSSMSLSRSNSREHLGNGSESDNWRDRNGLGPTAHEFVSSIGS
PKRKQNKSAEHYLSSSNYMDCISSLTGSNGCNLNSLFKGSDLPELFSKLGLGKYTDVFQQ
QEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRKLFDPANIRASFLEGGAS
GRLPRQYHSDIASVSGRW
NT seq 2937 nt   +upstreamnt  +downstreamnt
atggcggctcagtgcgacccgctgagcgggtacctgcagcagccgctctccgacccgggc
tccaacagcgagcgcagcaccgactcgcccgtgcccggctccgaggaggactcggccggc
ccgccgcggcccctgcacagcccggagtggggcgaggagcgattccgggtggacaggaag
aaactggaggccatgctccaagctgctgctgagggcaaagggaaaagtggggaagacttt
tttcagaagattatggaagaaacaaatacacagattgcttggccatcaaagttgaagatc
ggagcaaaatcgaaaaaagatccccatattaaagtctctggaaaaaaggaaaatgttaaa
gaagctaaagagaaaatcatgtctgtcctggacacaaaaagcaatcgggtaaccttgaag
atggatgtttcgcatacagaacattctcatgtgataggtaaaggtggcaataatattaaa
aaggtgatggaggaaacaggatgccatatccattttccagactcaaataggaataatcaa
gcggaaaaaagcaaccaagtgtctattgcaggacagccagctggagtggagtccgcaaga
gttagaattcgggagctgcttccattggtactcatgtttgaattgcctattgctggaatt
ctgcaaccaatcccagatcctaattctcccacaattcagcatatatctcagacatataat
atttcagtttcctttaaacaacggtctcgaatgtatggtgctacagtcattgtcagaggg
tcacaaaataacactagtgctgtgaaggaaggaacagccatgcttctagaacacctagct
gggagcttggcttctgcaatccctgtgagcacacaactagacattgcagcacagcatcat
ctctttatgatgggtcgaaatggaagtaacatcaagcatatcatgcagaggactggtgct
cagatccactttcctgaccctagtaacccacagaagaaatccactgtctacctccagggc
acaattgagtctgtctgtcttgccagacagtatctcatgggttgccttcctcttgtgctc
atgtttgatatgaaggaagaaattgaagtagaaccacagtttataacacaactaatggag
cagttagatgtcttcataagcattaagccgaagccaaagcaaccaagcaagtctgtgatt
gtaaaaagtgttgaacgaaatgccttaaatatgtatgaggcacggaaatgtctcttggga
cttgaaagtagtggagtcaccataccatcaaatccctctactgtctcatgccctgttggt
ctttcctgtcctggtttggatatcctgtcctcagcaggactaggactcactggacttggc
cttttaggtccaacagccctgtcggtcaacacctcaactactccaaactctctgttgaat
gctctgaatagctctgtgagtcccctgcagagtccaagttcagccacacctagccccaca
ttatgggcaacatctcttgctaacacgaatgccacaggtttctctgctattccacaccta
atgataccatctactgcccaagcaactttaactagtattttgctgtctggagtacctagt
tatagtcagaacactccatctccaccacctggcttgactcctgttgaagtccatgtcaac
ggcctgcaatcagaaagtaaaaaagggtcaccttctttaaatggtcacgtgaagacctca
aatatcaagtatgctgcactgtctgccacatcactgggagaaaatgtgttgagcacaaac
cacagtgattcggcaagacaaacaagtactcacggtgcctcagaacaagtagctgccaag
tcaaatagtgcagaaggttgcaatgatgcttttgtagaagtgggcatgccaaggagtcca
tcacattcagcaaataccagtgacctgaagcagatgatgagctcttccaaacaggcgtgt
acaaagaggcaaacagttgaattactgcaaggcaccaaaaactctcacttacatactaca
gagaggttgctctcagatgcagagttaagtgcttctgaaagtcctatggctgacaaaaag
gctcctggaagtgagcgggcagcagagcgagcagcagctgcccagcagaactccgaaaga
gcacgtctagcacagccatcttatgtaaatatgcaggcatttgactatgaacagaagaag
ctactagcgaccaaagctatgctaaagaagccagttgtaacagaagtgagaactccaaca
aatacatggagtgggttggggttctctaaatctatgcctgcagaaactatcaaagaactg
agaagagctaatcatgtatcatacaagccatctatgacaactacatatgagggttcatca
atgtctctctcacggtccaacagtcgggagcacctgggaaatggcagcgaatctgataac
tggagagatcgtaatgggcttggacccacagctcatgaatttgtctcctcaattggcagc
cccaagcggaaacaaaataaatcagctgaacactatctcagtagcagtaattacatggac
tgcatttcctcgctgacaggaagcaatggctgcaacctgaacagcctctttaagggatct
gatctgcctgagctgttcagcaaacttggtttgggcaaatacacagatgtatttcaacag
caagagattgatctgcagacattccttactcttactgatcaagatttgaaagagctagga
attaccactttcggtgccagaagaaaaatgctgcttgcaatctcagaactgaataaaaac
cgaagaaagctgtttgacccagcaaacatacgtgcctcattcctcgaaggtggagcgagt
ggaagactgccacgtcagtatcattcggacattgctagtgtcagtggtcgctggtag

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