Cygnus atratus (black swan): 118245000
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Entry
118245000 CDS
T09349
Symbol
TTF2
Name
(RefSeq) transcription termination factor 2 isoform X1
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cata03021
]
118245000 (TTF2)
Transcription machinery [BR:
cata03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118245000 (TTF2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Zn_ribbon_GRF
ResIII
DEAD
Lact-deh-memb
Motif
Other DBs
NCBI-GeneID:
118245000
NCBI-ProteinID:
XP_035396429
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All DBs
Position
1:complement(94019634..94039865)
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AA seq
1177 aa
AA seq
DB search
MEAVECAEHGSLCFLKTGVRDGPNKGKSFYVCGARGPAACGFVVPAPIPASFCLIHEGYM
VELQVLVQQQDRDEYQLFYRCVNSKLNGKKWCGSVPWQDPKATKVSKNLQSQPKKVPLFN
PSGQRNPFKVIDKNCEQSAWKQIKQGNGEESKGKGVDVEKDSVVVSHEEKKSTSDSSTER
EHLEGLKTEKKQSKGNSSDPELKESTVSESKLTLPEAWKGKNTYRDEVNHGGSGKESKKS
PEYVEKEPSGRSELLPVGLGKQSTSTKLPEKEQLGEESLKSCGDKETTQKEYIGKNGEMK
PLSKENAISSIVPQVASQHALLKQGGDAAASKTQIRPGLEQPADEVPASHEVVLVYSSSG
KNEPEKSVEALQPREVLAGASGKSMQETSLPGAAASLHMEGHQDSKALRNHLEVQLRQKK
NTLATVNIQVLPDKGQRLLKQVQDLEAALSALNISTTDTAEKGEDGASGGCCEEPLPNPF
GRPGGTKLITPLPLRDHKAGTSSGLHSHPSAAAALGSSEYCSHGFGMNSGVQNLYGGRMT
EDRLRAVHSATSDAINHLHKSLESCPTEQTVAEDPPGLKVPLLLHQKQALAWLLWRESQR
PCGGILADDMGLGKTLTMIALILAQKQLKTEKRNNKLEMWLSKNDSTVIPAHSTLIICPA
SLIHHWKKEIDRHVGYGKLRVYLYHGPNRDKHAEVLSEYDVVVTTYSLLSKEVPTSKEEG
EVPAEDHDVGSGSSPCSPLLRVDWARVILDEAHNIKNPKVQTSIAVCKLRAGARWAVTGT
PIQNNLLDMYSLLRFLRCSPFDEYKVWKYQVDNNTKKGGDRLSLLTRTLLLRRTKDQLDS
AGKPLVSLPQRSMQLHRLKLSADEQSVYNVLFARSRSTLQSYLKRQEQKHEGREYAGGNP
FEKVAQDFGGSQKEFLASSQSAFQVSSTVHVLSMLLRLRQCCCHLSLLKVALDQANLTSE
GLSLSIEEQLSALTLSELQNPDSKSTVYLNGTAFKTDLFEITRESTKIAHLLAELKTIRS
HSESQKSVVVSQWTSMLKVVAVHLQQLGLKYAVLDGSVNPKQRMDVVEEFNSNPKGPQVM
LVSLLAGGVGLNLTGGNHLFLLDMHWNPALEDQACDRIYRVGQQKDVVIHRFVCEGTVEE
KIVQLQTRKKGLAQQVLSGKGETSKLTLADLKTLFGI
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggttgagtgcgcggagcacggctccctctgcttcctgaagaccggcgtccgc
gacggccccaacaaggggaagagcttctacgtgtgcggggcgcggggcccggccgcctgc
ggcttcgtcgtcccggcgcctattcctgcttctttctgcttgatccatgagggatacatg
gtggaactgcaagtcctggttcagcagcaggacagagatgaataccagctgttttaccgg
tgcgttaacagtaagttgaatgggaagaaatggtgtggaagtgtcccatggcaggaccca
aaagctaccaaagtgtccaaaaacttacaatcacagcccaagaaagtacctctcttcaat
cccagtggccaaagaaatccattcaaagtgatagacaagaattgtgaacagtcagcctgg
aaacaaattaagcaaggcaatggagaggaaagtaaaggaaaaggagtcgacgtggagaaa
gatagtgtggtggtgtcgcatgaagaaaagaagtcaacctctgattcttccacggagagg
gaacatctagaagggctgaaaactgagaagaaacaatccaagggaaatagtagtgatcca
gaacttaaggaaagcacagtgtctgaatctaaacttactcttcctgaggcttggaaaggg
aaaaatacttatcgggatgaagtgaaccatggaggaagtggtaaggaatccaagaaatca
cctgaatatgtggagaaagagccaagtgggagatcagaactcttgccagtaggtcttgga
aagcaaagtacaagtaccaagcttccagagaaagaacagctcggagaggaaagtttaaaa
agctgtggggataaagaaaccacacagaaagaatacattgggaagaatggagagatgaaa
ccactgtctaaagaaaatgcaatttcctcaatagtaccgcaagtagcatcacaacatgct
ctcctgaagcaaggaggagatgcagcagcatctaagacacagatcaggccagggctggaa
cagcctgctgatgaagttcctgccagtcatgaagtagtacttgtttattcctcatcaggt
aaaaatgaacctgagaaatcagttgaggctttgcaaccaagagaggttcttgcaggagca
tcaggcaagagtatgcaggagacatctttgccaggagctgcagcatcgcttcacatggaa
ggacaccaggattctaaggctcttcgcaaccatcttgaagtccagctgaggcagaagaag
aatacattggctacagtgaacatccaagtactgccagataaagggcaacggttattaaag
caagtgcaggatttggaagctgcactgagtgctcttaacatttcaacaacagatactgct
gaaaaaggggaggatggtgcgagcggtggctgttgtgaggaacctttgcctaacccattt
ggcagaccaggtggtacaaagctgataacaccactgcctctcagggatcataaagctggg
acctcttcaggcttgcacagtcacccttctgctgctgctgctttgggctccagtgaatat
tgcagccacggttttggaatgaactctggtgtacagaatctgtatggcggaagaatgaca
gaagaccgactcagggccgtacacagtgccacaagtgatgctattaatcatcttcacaaa
tctctagaatcctgtccaacagagcagacggtagctgaagatccccctggattgaaggtt
ccgttgttgctgcaccagaaacaagccctggcatggctgctctggagggagagtcagagg
ccatgtggaggaattctggccgatgacatgggcttggggaagactctaacgatgattgct
ctgattctggcccagaagcagctgaagacagagaaaagaaacaacaagctagaaatgtgg
ctatccaaaaatgattccactgttatccctgcacacagcactttaatcatttgtcctgca
tccttgatccatcactggaagaaagagattgacagacatgtgggctatggaaaactgagg
gtctatttgtaccatgggccaaatcgagataaacatgcagaggtgctctctgaatatgat
gttgttgtcacaacttacagccttctctccaaggaggttcccacaagcaaagaggagggg
gaagtccctgctgaggaccatgatgtggggagtgggtcatctccctgttcccccctgctc
agggtagattgggctcgagtcatattggatgaagctcacaatattaaaaatccaaaggtt
caaacctccatagctgtgtgcaagctgagagctggtgccagatgggctgtcactgggaca
ccaatacagaacaacttattggacatgtactctcttctgaggtttctacgttgctctccc
tttgatgaatacaaggtgtggaagtaccaggtagataacaacactaagaagggaggagat
aggctaagcctcttaacgaggaccctgctattacggagaactaaagaccagctggattca
gctggaaagcccttggtatctctgccacagcgtagtatgcagttgcatcggttaaaactt
tcagcagatgaacagtctgtgtacaatgtgctctttgcaagatccaggtcaacgctgcag
tcctacctaaagagacaagagcagaaacatgagggcagagagtatgcggggggtaaccca
tttgagaaagttgcacaagactttgggggcagtcaaaaggaattcctagcaagttcacag
agtgccttccaagtttcaagtactgtccatgtcttgtccatgctgttgaggctccgtcag
tgctgctgccatctctccttactgaaagtggctctggaccaagctaatttgaccagtgaa
ggcctctccctctccattgaagagcaacttagtgctttgaccctgtctgagctccagaat
cctgattccaagtcaacagtttacctcaatggtacagcttttaaaacagatctctttgaa
atcaccagggagagcaccaagatagcacacctcttggctgaactgaaaactattcggagt
cactcggaatctcagaagagtgttgttgtgtctcagtggacgagcatgttgaaagttgta
gctgtgcacctccagcaattagggctgaagtatgcagtcctggatggctctgtcaatcct
aaacagagaatggatgtggtagaagagttcaatagcaatccgaaggggcctcaggtaatg
ttggtctcattgctggctggaggtgttggcttgaacttgacaggaggaaaccacctcttt
ctccttgacatgcattggaatcctgctctcgaggaccaggcttgtgaccgcatttaccga
gtggggcagcagaaggatgttgtgatacacaggtttgtctgtgaaggaacagtagaagaa
aagattgtgcaactccagaccaggaagaaggggcttgcccagcaggtgctgtcaggcaaa
ggggaaacctcgaagctcaccctggctgacctcaaaactctctttggcatctaa
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