Cygnus atratus (black swan): 118245180
Help
Entry
118245180 CDS
T09349
Symbol
COL8A1
Name
(RefSeq) collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
cata
Cygnus atratus (black swan)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
118245180
NCBI-ProteinID:
XP_035396886
LinkDB
All DBs
Position
1:93833090..93919780
Genome browser
AA seq
739 aa
AA seq
DB search
MAVLLVPVQLLAVAVAMYLQLVRSTQGGVYYGIKQLPPQVPQYQALGQQVPHMPLGKEGI
PMQHMGKEVPHMQYGKEYPHLPQYMKEVPQVPLLGKDMAPKKEKEMPVRSLRGEQGPPGE
PGPRGPPGPPGLPGHGVPGAKGKPGPQGYPGIGKPGLPGMPGKPGVMGPPGPRGEMGPKG
EVGPMGIPGPQGPPGPHGLPGIGKAGAPGLQGQPGPKGEPGMKGPPGAPGIPGPKGEKGV
GIPGLPGLKGPPGLPGPPGPVGLPGVGKPGMVGFPGPQGPLGKPGPPGELGPQGPPGVPG
MQGPPGVPGVGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGVGKPGFPGPKGERGVG
GLPGPLGPKGEKGHAGPPGIGGPPGEPGQPGLPGIMGPPGAVGFPGPKGEGGAMGPPGPV
GPKGEPGLQGFPGKPGFPGEVGAPGLRGLPGPTGPKGEAGQKGLPGLPGVPGLVGPKGEP
GLPGAQGLQGPSGIPGIAGPSGPIGPPGLPGAKGEPGLPGPPGFPGVGKPGAAGLQGPPG
KPGALGPPGQPGLQGPPGPPGPPGPPVIIPPTPPAVGQYLPEVGPGIDGVKPPYGYAGKK
GKAAGAVYEMPAFTAELLTPFPRVGVPVKFDKLLYNGRQNYNPATGIFTCEIPGIYYFAY
HVHCKGASVWVALFKNNEPLMYTYDEYKKGFLDQASGSAVVQLMHGDKVYVQMPSEQAAG
LYAGQYVHSSFSGYLLYPM
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgctgctggtccccgtgcagctgctggcggtggctgtcgccatgtacctgcag
ctggtgaggtccactcagggtggcgtctactatggcatcaagcagctgccaccccaggtg
ccccagtaccaagcccttggacaacaagtacctcacatgccgctgggcaaagaaggcatc
ccgatgcagcacatgggcaaggaggtgccacacatgcagtacgggaaggagtatccccac
ctgcctcagtacatgaaggaggtcccacaggtgcccctgcttggcaaggacatggctccc
aagaaagaaaaagaaatgcctgtgcgcagcttgaggggtgagcaaggtccccctggtgag
cctggaccaagagggccaccagggccaccaggattaccaggtcatggcgtgccaggagcc
aaaggaaaaccaggtccacaaggatatccaggaattgggaagccgggtttgccagggatg
cctgggaaaccgggagtgatggggccaccagggccaagaggggagatgggaccgaagggg
gaggttgggcccatggggataccagggccacagggaccaccgggacctcatggacttcca
ggaatagggaaggcaggtgctccagggctgcagggacagccaggacctaagggtgaacct
gggatgaagggtcccccaggggcccctgggatccctggtccaaaaggggagaagggtgtc
gggatcccgggtttgccaggactgaagggtccgcccgggctgcccggcccccctggccct
gtgggtctgccaggggtcgggaagccggggatggtggggttccccggaccacagggtccc
ctgggtaagcctggcccaccaggtgagctggggccacagggacccccgggggtccctgga
atgcaaggccctcccggtgtgcctggtgtcggcaaacccggccaagacggcatccctggc
cagccgggcttcccgggcggcaaaggggagcaaggcttgccaggcttgccggggccccct
ggcctccccggggttgggaagccgggcttccccgggcccaaaggtgagcgtggggtgggc
ggcctgcccggccccctggggcccaagggggaaaaagggcacgcagggccacccggcatt
ggggggcctccgggagagccaggccaaccaggcctgccaggcatcatgggcccccccggt
gctgtgggcttcccaggacccaaaggagaaggtggtgccatggggccaccgggaccagtg
ggccccaagggtgaacccggcttgcaggggttccccgggaagccaggtttccccggggaa
gtgggagcccccgggctgcgggggctgccgggccccacagggcccaagggggaagccggg
cagaagggcttgccggggctgccgggcgttccggggctcgtggggccgaagggcgagcca
gggctgcccggcgcccaggggcttcagggcccctcagggatcccaggcatcgcagggccc
agtggtcccatcggccccccaggactgcctggggccaagggtgaacctggcctgcccggc
ccccctggcttccctggtgtgggcaaacctggggctgcggggctgcagggtcccccggga
aagcccggggcgcttggaccccctggccagcccggcctccaggggccccccggccctccc
gggccacctggtcccccagtgatcatccccccaactccaccggctgtgggacagtacctg
cctgaggtggggccggggatagatggcgtcaagcccccttacggctacgcgggcaagaag
ggcaaggccgccggtgctgtctacgagatgcccgcattcacggcggagctcctcactccc
ttcccccgggttggcgtgcctgtgaagttcgacaaacttctctacaatggccggcagaac
tacaaccccgcaacagggatcttcacctgcgagatccccgggatctactacttcgcctac
catgttcactgtaaaggggccagcgtatgggtggctttgttcaagaacaacgagccgctg
atgtacacctacgatgagtacaagaagggcttcctggaccaagcctccgggagtgccgtc
gttcagctgatgcacggagacaaggtttacgttcagatgccatccgaacaggcagcagga
ctctatgctgggcaatacgttcattcatctttttcaggatatttattgtatcccatgtaa
DBGET
integrated database retrieval system