Cygnus atratus (black swan): 118245206
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Entry
118245206 CDS
T09349
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1
KO
K06753
roundabout, axon guidance receptor 1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118245206 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cata04515
]
118245206 (ROBO1)
Cell adhesion molecules [BR:
cata04515
]
Immunoglobulin superfamily
ROBO family
118245206 (ROBO1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
Ig_VEGFR-1-like_5th
C2-set_2
VEGFR1-3_N_Ig-like
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Unc5_NetrinR_N
Ig_PDGFR_d4
DUF7908
Big_4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
118245206
NCBI-ProteinID:
XP_050569204
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Position
1
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AA seq
1617 aa
AA seq
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MIAEFAHFYLFGLLCLASGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPAPTI
EWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSH
NASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWRKDGTPLDDKDERIT
IRGGKLMITYTRKNDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSA
EFKCEARGDPVPTVRWRKDDGELPKARYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKA
EASATLTVQVRSEPPQFVVKPRDQVAALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSY
QPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPV
IRQGPVNQTVAVDGTLVLNCVATGTLTPTILWKKDGILISTQDSRIKQLETGALQIRYAK
LGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNT
VTLSWQPNLNSGATPTSYIIEAFSHASGSTWQTVAENVKTESFAVKGLKPNAIYLFLVRA
ANAYGLSDPSQISDPVKTQDVPPTSQGVDHKQVQRELGDVVLHLHNPTILSSSSIEVHWT
VDQQSQYIQGYKILYRPTPASYGESEWLIFEVRTPTKNSVIIPELKKGVNYEIKARPFFN
EFQGADSEVKFAKTLEEAPSAPPQSVSVTKNDGNGTAIVVTWQPPPEDNQNGMVQEYKVW
CLGNESRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGPGVKSDPQFIQLDSHGN
PVSSEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIR
KVPSFTFTPTVTYQRGGDAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCT
SGNGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSP
NLKDGRFVSQPGQPTPYATTQLIQSNISNNVNNGSGDMNEKHWKPSVQQKQEVAPIQYNI
MEQNKLNKDYRVNDNIAPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKAPK
QAGMNWADLLPPPPAHPPPHSNSEDYSLSVDESYDQEIPCPVPPARMYLQQDELEEEEDE
RGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCQEDLGHIQHQPDRRRQPV
SPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADVEVAKMQNRRLLLRGLEQTPA
SSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGL
KVARRQMQDAAGGRRHFHASHCPRPTSPVSTDSNMSAVVIQKVRPAKKQKHQPGHLRREV
YTDDLPPPPVPPPAIKSPTAQSKSQLEVRPVMLPKLASVEPRTDRSAERKGASYKGRDGV
DGRQHSDVRTNSGERRESQEQQSDGKLRGNKTPKREGTPAKTHLLQEDILPYSRPTFPTS
NNPRDPSSSSSMSSRGSGGRQRADQANIARRNVAEMQVLGAYEHGKEDDDEMEETES
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcggagtttgcgcacttttacctcttcggattactctgcctcgcctcaggctcc
cgtcttcgtcaagaagatttcccacctcgaattgttgaacacccttctgatttaattgtt
tcaaaaggagaaccagcaactttaaactgtaaagctgaaggaagaccagccccaaccatt
gagtggtataaaggtggggaaagagtggaaactgacaaggatgaccctcgttcccatcgg
atgctgctgcccagcggatctttatttttcttacgcatagttcatgggcgcaagagtagg
ccggatgaaggggtctatgtctgcgtggcaaggaattaccttggggaagctgtaagtcat
aatgcatcgctggaagtggcaattctacgtgatgacttcagacaaaatccatcagatgta
atggtagccgtgggcgaacctgctgtgatggagtgtcagcctccaagaggtcacccagaa
cccactatatcatggagaaaagatgggacccctctggatgacaaagatgagagaattaca
atcagaggaggaaagcttatgatcacatacacaagaaagaatgatgctggcaagtatgtt
tgtgttggaacaaatatggttggagaacgtgaaagcgaagttgcagagctcactgttcta
gaaagaccatcttttgtgaagagaccaagtaatctggctgtaactgtggatgatagtgct
gagtttaaatgtgaggcaagaggtgaccccgtccctacagtaagatggaggaaagatgac
ggggaattaccaaaagcaagatacgaaatccgtgatgatcataccttgaaaatacggaaa
gttatggcaggagacatgggctcgtatacttgcgttgcagaaaatatggttggaaaagct
gaagcatcagcaactctaacagtgcaagtaagatcagagcctccacagtttgttgtaaag
ccgcgtgatcaggtagctgcactgggaagaacagtgactttccagtgtgaagcaactgga
aaccctcagccagccatcttttggcggagagagggaagtcagaaccttcttttctcatac
cagccccctcagtcatccagccgattttcagtttcccagacaggtgacctcaccatcacc
aatgtccagaggtcggatgttggctactatatctgccagacattaaatgttgcaggaagt
attataacaaaagcctacttggaagttactgatgtgattgcagaccggcctccccctgtc
attcgacagggtcctgtgaatcagactgtggctgtagacggtactttagtactgaactgt
gtggctacaggcactttaacgcccactatcctctggaaaaaggatgggatcctgatctct
actcaggactctcgcatcaagcagttggaaactggagcattgcagatcagatacgctaag
ctgggcgacaccggtcggtacacctgcattgcttcaacaccaagtggcgaagctacatgg
agtgcttacatagaggtccaagaatttggagtcccagtgcagccaccaagacccactgac
ccaaacttgattcctagtgctccatcaaaacctgaggttacagatgtcagcagaaataca
gtaacattgtcatggcaaccaaatttgaattcaggtgcaactccaacctcgtacataatt
gaggccttcagccatgcatctggtagcacctggcaaactgtagctgaaaatgtgaaaaca
gagagttttgcagttaaagggctaaaacctaatgcaatttatctattcctcgtgagggca
gcaaatgcgtatggactaagtgacccaagccaaatatctgatccagtgaaaactcaagat
gttccaccaacaagtcagggtgtggatcacaagcaggtccagagagaactaggtgatgtg
gtactacatctgcacaaccctactatcctttcttcctcctcaattgaagttcattggact
gtggaccaacaatcccagtatattcaaggatataaaatcttgtaccggcctacaccagca
tcctatggagagtcagagtggttaatttttgaagtgaggactccaaccaaaaacagcgtt
atcattccagagctgaagaaaggtgtaaactacgaaattaaggcccgccccttttttaat
gagtttcaaggagcagatagtgaagtgaaatttgcaaaaaccctagaagaagcgcccagt
gctccacctcagagtgtttcagtaactaaaaatgatgggaacgggactgcaattgtggtc
acctggcagccaccccccgaggataaccagaacggaatggttcaagaatataaggtttgg
tgtcttggcaatgaaagtcgataccatataaacaaaacggtagatggttccaccttttct
gtagtcatcccctccctcgttcctggtattcgatacagtgtggaagtggcagcaagtact
ggggcaggacctggagtgaaaagtgatccgcagtttatccaattagattctcatggaaac
cctgtgtcttcagaagatcaagtcagtttagcccagcagatttctgatgtagtaaaacag
cctgcctttattgctggaattggtgcagcctgttggattatcctcatggtcttcagcatc
tggttatatcgccacaggaagaagcgaaatggactcactagtacttacgctggtatcaga
aaagtcccgtcttttaccttcacaccaacagtaacctatcagaggggaggagatgccgta
agcagtggaggcaggccaggtctcctaaacatcagtgaaccagccacgcagccatggtta
gcagatacttggcctaacacagggaacaaccacaatgactgctccatcaactgctgcacc
tctggcaatggaaacagtgatagcaaccttacaacatacagtcgaccagccgattgtata
gcaaattacaacaatcagctggacaacaagcaaacaaacctgatgttgcctgagtcaact
gtatatggtgacgtggacctaagcaacaaaatcaatgagatgaaaaccttcaatagtcca
aatctaaaggatggaagatttgtcagccaacctgggcagcccactccatatgccaccact
caactcatccagtcaaatatcagcaataatgttaacaatggcagcggggatatgaatgag
aaacactggaaaccctctgttcagcaaaagcaagaggttgcacccatacagtacaacatt
atggagcaaaacaaattaaacaaagattacagggtaaatgacaacattgctccaacaatt
ccatacaaccagtcatatgaccagaatacaggtggatcctacaacagctcggatagaggc
agtagcacatctgggagtcaagggcacaagaagggtgctcggactccaaaggctcccaag
caagctggcatgaactgggcagatcttcttccaccccctccagcacatccacctccccac
agcaatagtgaagattacagtctttcagtggatgaaagctatgaccaagaaattccttgt
ccagttccacctgcgaggatgtatctgcagcaggatgagctagaggaagaggaagatgag
cgaggtcctactccacctgttcgaggagctgcttcctctccagccgctgtctcctatagc
catcagtcaactgccactctcactccctctccccaggaagaactccagcccatgttacag
gactgtcaggaggatctgggacacatacaacaccagcctgaccggagacgtcagcctgtg
agtcctccaccccctccaaggcccatctctccaccacatacctacggatatatctcaggg
cccttggtctctgatatggatactgatgcaccagaagaggaagaggatgaggcagatgta
gaggttgccaagatgcagaacaggagactccttttgcgtggccttgagcagacacctgcc
tcaagtgttggggatttggagagctctgtaacagggtccatgatcaatggctggggttca
gcttctgaagaagataacatctcaagtggtcggtctagcgttagctcttcagatggatca
ttttttactgatgcagattttgcacaggccgttgcagcagctgcagaatacgctggcctg
aaagtagccagacgtcaaatgcaggatgctgcaggaggccgtagacattttcatgcatca
cactgtcctagaccaaccagccctgtgtctactgacagcaacatgagtgctgttgtaata
cagaaggtccgacctgccaaaaagcaaaagcaccagccaggacatctgcgcagagaagtc
tacacagatgacttgccaccccctcctgtgccacctccagctataaaatcaccaaccgct
cagtccaaatcacagctggaggtgcggcctgtcatgttgccaaaactggcttctgtagaa
ccgaggacagacagatctgcagaaaggaaaggagcaagctacaaggggagggacggggtg
gatgggagacagcattcagatgtgcggacaaattcaggagagcggagagaatcacaggaa
cagcaaagtgatgggaaactgcgaggaaataaaacaccaaaacgagaaggcacaccagca
aaaactcatcttcttcaagaggacatcctgccatattctagaccaacatttccaacatca
aataatcctagagatcctagctcctccagctctatgtcttcaagaggatcgggaggtaga
cagagggcagatcaagcaaatatagcccgaaggaatgttgcagaaatgcaagtactagga
gcatatgaacacggaaaagaagatgacgacgagatggaggaaacagaaagctga
DBGET
integrated database retrieval system