KEGG   Cygnus atratus (black swan): 118245206
Entry
118245206         CDS       T09349                                 
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1
  KO
K06753  roundabout, axon guidance receptor 1
Organism
cata  Cygnus atratus (black swan)
Pathway
cata04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:cata00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    118245206 (ROBO1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cata04515]
    118245206 (ROBO1)
Cell adhesion molecules [BR:cata04515]
 Immunoglobulin superfamily
  ROBO family
   118245206 (ROBO1)
SSDB
Motif
Pfam: I-set Ig_3 ig Ig_2 fn3 V-set Ig_VEGFR-1-like_5th C2-set_2 VEGFR1-3_N_Ig-like FN3_DSCAM-DSCAML_C Pur_ac_phosph_N Unc5_NetrinR_N Ig_PDGFR_d4 DUF7908 Big_4 Ig_J_second
Other DBs
NCBI-GeneID: 118245206
NCBI-ProteinID: XP_050569204
LinkDB
Position
1
AA seq 1617 aa
MIAEFAHFYLFGLLCLASGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPAPTI
EWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSH
NASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWRKDGTPLDDKDERIT
IRGGKLMITYTRKNDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSA
EFKCEARGDPVPTVRWRKDDGELPKARYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKA
EASATLTVQVRSEPPQFVVKPRDQVAALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSY
QPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPV
IRQGPVNQTVAVDGTLVLNCVATGTLTPTILWKKDGILISTQDSRIKQLETGALQIRYAK
LGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNT
VTLSWQPNLNSGATPTSYIIEAFSHASGSTWQTVAENVKTESFAVKGLKPNAIYLFLVRA
ANAYGLSDPSQISDPVKTQDVPPTSQGVDHKQVQRELGDVVLHLHNPTILSSSSIEVHWT
VDQQSQYIQGYKILYRPTPASYGESEWLIFEVRTPTKNSVIIPELKKGVNYEIKARPFFN
EFQGADSEVKFAKTLEEAPSAPPQSVSVTKNDGNGTAIVVTWQPPPEDNQNGMVQEYKVW
CLGNESRYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGPGVKSDPQFIQLDSHGN
PVSSEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIR
KVPSFTFTPTVTYQRGGDAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCT
SGNGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSP
NLKDGRFVSQPGQPTPYATTQLIQSNISNNVNNGSGDMNEKHWKPSVQQKQEVAPIQYNI
MEQNKLNKDYRVNDNIAPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKAPK
QAGMNWADLLPPPPAHPPPHSNSEDYSLSVDESYDQEIPCPVPPARMYLQQDELEEEEDE
RGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCQEDLGHIQHQPDRRRQPV
SPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADVEVAKMQNRRLLLRGLEQTPA
SSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGL
KVARRQMQDAAGGRRHFHASHCPRPTSPVSTDSNMSAVVIQKVRPAKKQKHQPGHLRREV
YTDDLPPPPVPPPAIKSPTAQSKSQLEVRPVMLPKLASVEPRTDRSAERKGASYKGRDGV
DGRQHSDVRTNSGERRESQEQQSDGKLRGNKTPKREGTPAKTHLLQEDILPYSRPTFPTS
NNPRDPSSSSSMSSRGSGGRQRADQANIARRNVAEMQVLGAYEHGKEDDDEMEETES
NT seq 4854 nt   +upstreamnt  +downstreamnt
atgatcgcggagtttgcgcacttttacctcttcggattactctgcctcgcctcaggctcc
cgtcttcgtcaagaagatttcccacctcgaattgttgaacacccttctgatttaattgtt
tcaaaaggagaaccagcaactttaaactgtaaagctgaaggaagaccagccccaaccatt
gagtggtataaaggtggggaaagagtggaaactgacaaggatgaccctcgttcccatcgg
atgctgctgcccagcggatctttatttttcttacgcatagttcatgggcgcaagagtagg
ccggatgaaggggtctatgtctgcgtggcaaggaattaccttggggaagctgtaagtcat
aatgcatcgctggaagtggcaattctacgtgatgacttcagacaaaatccatcagatgta
atggtagccgtgggcgaacctgctgtgatggagtgtcagcctccaagaggtcacccagaa
cccactatatcatggagaaaagatgggacccctctggatgacaaagatgagagaattaca
atcagaggaggaaagcttatgatcacatacacaagaaagaatgatgctggcaagtatgtt
tgtgttggaacaaatatggttggagaacgtgaaagcgaagttgcagagctcactgttcta
gaaagaccatcttttgtgaagagaccaagtaatctggctgtaactgtggatgatagtgct
gagtttaaatgtgaggcaagaggtgaccccgtccctacagtaagatggaggaaagatgac
ggggaattaccaaaagcaagatacgaaatccgtgatgatcataccttgaaaatacggaaa
gttatggcaggagacatgggctcgtatacttgcgttgcagaaaatatggttggaaaagct
gaagcatcagcaactctaacagtgcaagtaagatcagagcctccacagtttgttgtaaag
ccgcgtgatcaggtagctgcactgggaagaacagtgactttccagtgtgaagcaactgga
aaccctcagccagccatcttttggcggagagagggaagtcagaaccttcttttctcatac
cagccccctcagtcatccagccgattttcagtttcccagacaggtgacctcaccatcacc
aatgtccagaggtcggatgttggctactatatctgccagacattaaatgttgcaggaagt
attataacaaaagcctacttggaagttactgatgtgattgcagaccggcctccccctgtc
attcgacagggtcctgtgaatcagactgtggctgtagacggtactttagtactgaactgt
gtggctacaggcactttaacgcccactatcctctggaaaaaggatgggatcctgatctct
actcaggactctcgcatcaagcagttggaaactggagcattgcagatcagatacgctaag
ctgggcgacaccggtcggtacacctgcattgcttcaacaccaagtggcgaagctacatgg
agtgcttacatagaggtccaagaatttggagtcccagtgcagccaccaagacccactgac
ccaaacttgattcctagtgctccatcaaaacctgaggttacagatgtcagcagaaataca
gtaacattgtcatggcaaccaaatttgaattcaggtgcaactccaacctcgtacataatt
gaggccttcagccatgcatctggtagcacctggcaaactgtagctgaaaatgtgaaaaca
gagagttttgcagttaaagggctaaaacctaatgcaatttatctattcctcgtgagggca
gcaaatgcgtatggactaagtgacccaagccaaatatctgatccagtgaaaactcaagat
gttccaccaacaagtcagggtgtggatcacaagcaggtccagagagaactaggtgatgtg
gtactacatctgcacaaccctactatcctttcttcctcctcaattgaagttcattggact
gtggaccaacaatcccagtatattcaaggatataaaatcttgtaccggcctacaccagca
tcctatggagagtcagagtggttaatttttgaagtgaggactccaaccaaaaacagcgtt
atcattccagagctgaagaaaggtgtaaactacgaaattaaggcccgccccttttttaat
gagtttcaaggagcagatagtgaagtgaaatttgcaaaaaccctagaagaagcgcccagt
gctccacctcagagtgtttcagtaactaaaaatgatgggaacgggactgcaattgtggtc
acctggcagccaccccccgaggataaccagaacggaatggttcaagaatataaggtttgg
tgtcttggcaatgaaagtcgataccatataaacaaaacggtagatggttccaccttttct
gtagtcatcccctccctcgttcctggtattcgatacagtgtggaagtggcagcaagtact
ggggcaggacctggagtgaaaagtgatccgcagtttatccaattagattctcatggaaac
cctgtgtcttcagaagatcaagtcagtttagcccagcagatttctgatgtagtaaaacag
cctgcctttattgctggaattggtgcagcctgttggattatcctcatggtcttcagcatc
tggttatatcgccacaggaagaagcgaaatggactcactagtacttacgctggtatcaga
aaagtcccgtcttttaccttcacaccaacagtaacctatcagaggggaggagatgccgta
agcagtggaggcaggccaggtctcctaaacatcagtgaaccagccacgcagccatggtta
gcagatacttggcctaacacagggaacaaccacaatgactgctccatcaactgctgcacc
tctggcaatggaaacagtgatagcaaccttacaacatacagtcgaccagccgattgtata
gcaaattacaacaatcagctggacaacaagcaaacaaacctgatgttgcctgagtcaact
gtatatggtgacgtggacctaagcaacaaaatcaatgagatgaaaaccttcaatagtcca
aatctaaaggatggaagatttgtcagccaacctgggcagcccactccatatgccaccact
caactcatccagtcaaatatcagcaataatgttaacaatggcagcggggatatgaatgag
aaacactggaaaccctctgttcagcaaaagcaagaggttgcacccatacagtacaacatt
atggagcaaaacaaattaaacaaagattacagggtaaatgacaacattgctccaacaatt
ccatacaaccagtcatatgaccagaatacaggtggatcctacaacagctcggatagaggc
agtagcacatctgggagtcaagggcacaagaagggtgctcggactccaaaggctcccaag
caagctggcatgaactgggcagatcttcttccaccccctccagcacatccacctccccac
agcaatagtgaagattacagtctttcagtggatgaaagctatgaccaagaaattccttgt
ccagttccacctgcgaggatgtatctgcagcaggatgagctagaggaagaggaagatgag
cgaggtcctactccacctgttcgaggagctgcttcctctccagccgctgtctcctatagc
catcagtcaactgccactctcactccctctccccaggaagaactccagcccatgttacag
gactgtcaggaggatctgggacacatacaacaccagcctgaccggagacgtcagcctgtg
agtcctccaccccctccaaggcccatctctccaccacatacctacggatatatctcaggg
cccttggtctctgatatggatactgatgcaccagaagaggaagaggatgaggcagatgta
gaggttgccaagatgcagaacaggagactccttttgcgtggccttgagcagacacctgcc
tcaagtgttggggatttggagagctctgtaacagggtccatgatcaatggctggggttca
gcttctgaagaagataacatctcaagtggtcggtctagcgttagctcttcagatggatca
ttttttactgatgcagattttgcacaggccgttgcagcagctgcagaatacgctggcctg
aaagtagccagacgtcaaatgcaggatgctgcaggaggccgtagacattttcatgcatca
cactgtcctagaccaaccagccctgtgtctactgacagcaacatgagtgctgttgtaata
cagaaggtccgacctgccaaaaagcaaaagcaccagccaggacatctgcgcagagaagtc
tacacagatgacttgccaccccctcctgtgccacctccagctataaaatcaccaaccgct
cagtccaaatcacagctggaggtgcggcctgtcatgttgccaaaactggcttctgtagaa
ccgaggacagacagatctgcagaaaggaaaggagcaagctacaaggggagggacggggtg
gatgggagacagcattcagatgtgcggacaaattcaggagagcggagagaatcacaggaa
cagcaaagtgatgggaaactgcgaggaaataaaacaccaaaacgagaaggcacaccagca
aaaactcatcttcttcaagaggacatcctgccatattctagaccaacatttccaacatca
aataatcctagagatcctagctcctccagctctatgtcttcaagaggatcgggaggtaga
cagagggcagatcaagcaaatatagcccgaaggaatgttgcagaaatgcaagtactagga
gcatatgaacacggaaaagaagatgacgacgagatggaggaaacagaaagctga

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