Cygnus atratus (black swan): 118245231
Help
Entry
118245231 CDS
T09349
Symbol
CHM
Name
(RefSeq) rab proteins geranylgeranyltransferase component A 1
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cata01006
]
118245231 (CHM)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118245231 (CHM)
Prenyltransferases [BR:
cata01006
]
Protein prenylation
Rab geranylgeranyltransferase
118245231 (CHM)
Membrane trafficking [BR:
cata04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118245231 (CHM)
Endosome - Lysosome transport
Rab GTPases and associated proteins
118245231 (CHM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDI
RAE1_2_domI_C
FAD_oxidored
NAD_binding_8
FAD_binding_2
PYCO1_repeat
Motif
Other DBs
NCBI-GeneID:
118245231
NCBI-ProteinID:
XP_035397052
LinkDB
All DBs
Position
13
Genome browser
AA seq
655 aa
AA seq
DB search
MADNLPAEFDVVVVGTGLPESIIAAACARSGQRVLHVDSRNYYGGNWASFSFSGLLSWIK
ENQEKSDISDECEDWRKLILENEEVISLNKKDKTIEHVEAFCFGDQDSAKDVEEAGALPK
LPVFGASGAEGVAQDPNKERPPLESAVARAESWEPEKAASVDPASTAEGNDTEVNCENES
SHSLSSGESAPDLGKAEAAPSEVSAQEPKKIMYSQIVREGRRFNIDLVSKLLYSRGLLID
LLIKSNVSRYAEFKNATRILAFREGKVEQVPCSRADVFNSRQLTMVEKRMLMKFLTFCLD
FEQHPDEFQDYKNSTFAQFLRTRKLTPSLQHFILHSIAMVSETDCSTLEGLQATRKFLQC
LGRYGNTPFLFPLYGQGEIPQCFCRMCAVFGGIYCLRHSVQCLVVDKESGRCKAIIDHFG
QRISANYFIVEDSYLSESVCRNVCYRQISRAVLITDQSVLKTDSEQQVSILTVPPVDLGQ
PAVCVIELCSSTMTCMKDTYLVHLTCPSTKTAREDLEPVVQKLFHLNTEIGKETENEELE
KPRVFWAVYFNMRDSSGIDRNSYSSLPSNVYVCSGPDSALGNDCAVKQAETIFQEMFPTE
EFCPPPPNPEDIIYDEDEIASEESGLSNSPETKPEPSPEESSSRGSTAVKEHSEE
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacctgccggcagagtttgacgtggtggtggtgggcaccggtttgcctgag
tctattattgcagcagcatgtgccagaagtggccagagagttcttcatgttgattcgaga
aattactatggtggaaactgggccagttttagcttttcaggattattgtcctggattaaa
gaaaatcaggaaaagtcagatatcagtgatgaatgtgaagactggagaaaactgatcctt
gagaatgaagaagttatctctcttaacaagaaggataaaactattgaacatgtagaagct
ttctgttttggcgatcaggattcagccaaagatgttgaagaagccggtgcattgccaaag
ctgcctgtatttggagcctctggtgctgagggggttgctcaggacccaaacaaagagcgc
ccaccactggagagtgccgtagcaagggctgagagctgggaaccagaaaaggctgcaagt
gtggatcctgcaagtacagcggaagggaatgatacagaagtaaactgtgagaatgaaagt
tctcatagtctgtcttcaggcgagtccgctccggatttgggaaaagctgaagctgcacca
tcagaagtttctgcccaagaaccaaagaaaattatgtattcccaaattgttagggaaggc
agaaggtttaatattgatttagtttccaagctgctttactcccgaggtctgttaattgac
cttctgattaagtcgaacgttagcagatatgcagagtttaaaaatgctacaagaattctt
gcttttcgagaaggaaaagtagaacaggtaccctgttctagagcagatgtcttcaacagc
agacagctcactatggtggaaaagcgaatgctaatgaaatttttgacattttgtttggac
tttgaacaacaccctgatgaatttcaagactacaagaacagtacgtttgctcagttctta
agaacacggaagttaacacctagcttgcagcacttcattcttcattctattgcaatggtt
tcggagactgattgcagcactcttgaaggtcttcaggcaacaagaaaatttcttcagtgc
cttggccgctatggcaatacaccatttttgtttcctctatatggtcaaggcgagattcca
cagtgcttttgcaggatgtgtgcagtatttggtggtatctattgtcttcgccattctgtg
cagtgccttgtagtggacaaagaatctggacgatgcaaagcaattattgatcattttgga
caaagaataagtgccaactattttattgtggaagacagttacctttcagagagcgtatgc
agaaatgtgtgttacaggcagatctccagagcagtgctcattacagatcaatctgtacta
aagacagattcagagcagcaggtttccattttgacagtgcctccagtggatctaggacaa
ccagcggtctgtgtcattgagttgtgttcctcaactatgacatgcatgaaggacacttat
ttagtccatttaacgtgtccatcaactaaaactgctagggaagatttagagcctgttgta
cagaagttattccatctaaatactgaaataggaaaagagactgaaaatgaagaattggaa
aaacccagagtcttctgggcagtatacttcaacatgagagattcttcaggaatcgacaga
aattcgtacagcagcttaccctcaaatgtgtatgtctgttctggcccagactctgcttta
ggaaatgactgtgctgtcaaacaggctgaaactattttccaagaaatgtttcctacagag
gaattttgcccaccaccgccaaatccagaagatattatttatgatgaagatgagattgca
tcagaagagtctggactcagtaattcaccagagacaaaacctgaaccctcccctgaggaa
agcagtagcagaggtagtactgctgttaaagaacatagtgaagaatga
DBGET
integrated database retrieval system
