Cygnus atratus (black swan): 118245292
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Entry
118245292 CDS
T09349
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03013
Nucleocytoplasmic transport
cata03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118245292 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
118245292 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cata03019
]
118245292 (THOC2)
03041 Spliceosome [BR:
cata03041
]
118245292 (THOC2)
Messenger RNA biogenesis [BR:
cata03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
118245292 (THOC2)
Spliceosome [BR:
cata03041
]
Complex C
Other components
EJC/TREX
118245292 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
118245292 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
118245292
NCBI-ProteinID:
XP_035397218
LinkDB
All DBs
Position
13
Genome browser
AA seq
1637 aa
AA seq
DB search
MAANAPTPRARLARLPSCPAVRRVPSDPGAPHPHPGSRRHTGKMAGAIPAEWIKNWEKGG
KNEFLQLCRTLSENKSHDNVGFRDIQQVLYELACHVVRGNLKHDQASNVLGDVIEFREDM
PSILADVFCILDIETSCLEEKSKRDNFTQLVLACLYLVSDTVLKERLDPETLESLGLIKQ
SQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLSGNITSDLILENIKSLI
GCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQTLCHILGFKFKFYQDPSG
ETPPSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREIVEAKQIVRKLTMVVLSS
EKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQHAQSIMDQMPPFYATSHKPIA
IALCQLVHVTIEPLYRRVGVPKGAKGSPISSLPNKRAPKQADSFEDLRKEVFNMLCYLGP
HLSHDPILFAKVVRLGKAFMKEFQSDGSKQEDKEKMEILFSCLLSITDQVLLPSLSLMDC
NACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKEN
VKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEAL
ANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQYVANQLKAGKSFDLLILK
EVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLAL
PLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSI
DVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQHKVHKYITSCELVMAPV
HDAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREVSKLKVQMKAIDDNQEMP
PNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQL
CIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSDIIYTVASCTENEASRYG
RFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGNKADQLDYENFRHVVHKW
HYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQALERRVHKICQEEKEKRP
DLYALAMGYSGQLKSRKPFMIPENEFHHKDPPARNAVAATVQNGPGGAGMPTSLTINTAK
LEESTAEETEKLKEKSQGAVKVINKAVNTTPKMTTSNGNSASNSKIIKEKDDKEKSGKEK
DKEKKEKIPAATPETKALGKDGKDKPKEERVNKDDKAREIKEKTPKSDKEKEKAKKEEKA
SKEEKSKTVVTTVESKSAAEKEREKEPSREKDVAKDMKSKEITKGGEKIPVAGSLKSPVP
RSETSESEREQKRRKVDTHSSPSHSSTVKDNLNELKDSSAKHYINHTTPTLSKSKEREVD
KKDLDKSRERSREREKKEEKDRKDRKRDHSNSDREVPQDSTKRRKEENGTTGSSKHSKSE
SPSDSPRSNEKEKEKSKSKSSGKEKGDSIKAEKMEKSSSGSKKESRHDKEKTEKKEKRDS
AGGKEEKKHHKSSDKHR
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgaacgcgccgactcctcgggcacggctcgcgcggctcccgtcgtgccctgcg
gtccgccgcgtcccctctgacccgggggcgccgcacccccatccgggctctcggcgccac
acggggaagatggcgggcgcgatccccgccgagtggataaagaactgggagaaagggggc
aagaacgagtttttgcaactgtgtcgcactctcagtgaaaacaaaagccatgataatgtc
ggtttcagagatatccaacaggttttgtatgagcttgcatgtcatgttgtcagaggaaac
ctgaagcatgatcaagcctctaatgttcttggtgatgttatagaatttcgggaagacatg
ccttctatcttagctgatgtattctgcatattagatattgaaacaagttgtttagaagaa
aaaagtaagagggataattttactcaactggtattagcctgtttgtatcttgtatctgac
actgtcctaaaggagcgtttagatccagaaacactggaatcactaggacttatcaagcag
tctcaacagttcaatcagaaatctgttaaaataaagacaaagctattttataaacaacag
aaatttaatttgttaagagaggagaatgaaggttacgccaagctgattgcagagctgggg
caggacttatctggaaatatcactagtgatttaatccttgaaaatatcaaatctttaata
ggatgttttaaccttgatcctaacagagttttggatattatcctagaagtctatgagtgc
aggcctgagtatgatgatttctttgtaccactgatagagtcatacatgtacatgtgtgaa
ccacaaactttatgccatatccttgggttcaaattcaaattttatcaggatccaagtggt
gagacgcctccttccttatacagagttgctgctgtcctgttgcaacataatctgatagat
ttggaagatctttatgtccatcttcttccaggggataatgccatcattgaagaacacaag
cgagagatagtggaagctaagcaaattgtcagaaaacttacaatggttgtcttatcctct
gaaaagactgaggaaaaggagaaggaaaaagaaaaagaggaggagaaaactgaaaagcct
cctgataatcagaagcttggtttattggaagctttattaaaaattggtgattggcagcat
gcacaaagtattatggatcagatgcctccattttatgctacttcacataagcctattgca
attgccctttgccagcttgtgcatgtgacaattgaacctttgtaccgcagggttggtgta
ccaaaaggggcaaaagggtcaccaatttcttctttgccaaacaagagagcaccaaaacaa
gcagacagcttcgaagacttgagaaaggaagtgttcaacatgttgtgctaccttggtcct
catctgtcccacgatcccattttattcgctaaagtggtgcgccttggaaaagcatttatg
aaagagtttcagtctgatggaagtaagcaagaagataaagagaaaatggagatactgttt
agctgtttgctgagtattactgatcaagttttgcttccatctctttctttgatggactgc
aatgcatgcatgtctgaggagttatggggaatgttcaaaacttttccatatcagtaccgg
taccgtctttatggacaatggaaaaacgaaacctacaatagtcatccacttctagtgaaa
gttaaagctcaaaccatagaccgagccaaatatattatgaagcgtctaactaaggaaaat
gtgaaaccctctggaagacaaattggaaagctcagccacagcaatcctacgattttattt
gattatattttatcacaaatacaaaaatacgataacttaataaccccagttgttgattca
ctgaaatacctcacttcactgaattacgatgtcttggcatactgtatcattgaagcactg
gcaaatcccgagaaggagagaatgaagcatgatgacactactatttcaagctggcttcag
agtctggctagcttttgtggtgccgttttcagaaaatacccaattgaacttgctggccta
cttcaatacgtagccaaccaactgaaagctgggaaaagctttgatttgcttattttaaaa
gaggtagtacaaaaaatggcagggatagaaattacagaagaaatgacgatggagcaattg
gaagccatgactggtggagaacaactaaaagctgagggtggatactttggccaaatcagg
aatacaaaaaaatcctctcagagattgaaagatgcattattggaccatgaccttgccctt
ccactgtgcctgcttatggctcagcagagaaatggtgtgatctttcaagagggaggggaa
aaacatctgaagctggtgggaaaactgtatgaccagtgccatgacaccctggtacaattt
ggtgggtttctagcatccaatctaagcacagaggattacattaagcgagtgccttcaatt
gatgttctctgtaatgaatttcacacacctcatgatgctgcgtttttcctctcgagacct
atgtatgctcaccatatttcatccaagtatgatgaactaaaaaaagctgaaaagggaaat
aaacagcagcacaaggttcacaaatacattacatcgtgtgagctggtaatggcacctgtt
catgatgctgtgatctctctgcaccttcccaaggtctgggatgatatcagtcctcagttc
tatgctacattctggtctttgacaatgtatgaccttgctgtcccacatagtagctatgac
agagaagtcagtaaacttaaagtccagatgaaagccatagatgacaatcaggaaatgcct
ccaaataaaaagaaaaaggaaaaagaacgttgcacagctcttcaagacaagctcctcgaa
gaggagaagaagcagttggagcatgtgcaaagggttctacagagactgaaactggagaag
gataactggcttctggcaaagtctaccaaaaatgagactatcacaaaatttttgcagtta
tgtatatttcctcgctgcattttttcggcaatcgatgcagtttattgtgctcactttgta
gaactggtgcatcagcagaaaacacccaacttctccactcttctctgctatgacagagtt
ttctctgatattatatatacagtagcaagttgcactgaaaatgaagctagtagatacggc
aggtttttatgctgtatgctggagactgtgactagatggcacagcgacagagtcatatat
gaaaaggaatgtggcaactatccaggcttcctaactatattacgggcaactggatttgat
ggtggaaataaagctgatcaattggattatgagaattttagacatgtggtacacaaatgg
cactataaattaactaaggcttctgtacactgccttgaaacaggtgaatatacacatatc
agaaacatcctgattgtgctgaccaaaatcctcccatggtatccaaaagtgttgaacctg
ggccaagccttggaaagaagagtacataagatatgtcaggaagagaaagagaagagaccc
gatctatatgcgttggctatgggctattctgggcagttgaaaagtaggaagcctttcatg
atacctgaaaatgaattccaccacaaagacccacctgccaggaatgctgtagctgcaaca
gtacaaaatgggccaggtggtgctgggatgcctacatctctcacaataaacacagctaaa
ctggaggaaagcactgctgaagagactgaaaaactaaaggagaagtctcagggtgctgtg
aaagttattaataaagctgtcaacactacaccgaagatgacaacaagcaatggaaacagt
gcttctaatagcaaaattattaaggagaaagatgataaagaaaaaagtgggaaggaaaaa
gataaagaaaaaaaagaaaaaattccagctgccactccagagacgaaggcacttgggaag
gatgggaaagacaaacctaaggaagaacgggtgaacaaagatgataaagcaagagagatc
aaggagaaaacaccaaaatctgacaaggagaaggaaaaagccaagaaagaagaaaaagct
tcaaaggaagaaaaatccaagacagttgttaccaccgtcgagtcaaagtcagctgcagaa
aaggagagagaaaaggagccatctagagaaaaagatgtagcgaaggatatgaaatccaag
gaaattactaaaggaggagaaaagattccagtagctgggtccttgaagtctcctgttccc
cgatcagaaacatcagaatctgagagggaacaaaaacgccgaaaagttgatacccattct
tctccatcacattcctcaacagtaaaggacaacctcaacgaactcaaggactcttcagca
aagcactacattaaccacactactccaacactgtccaagagtaaagagagagaagtggac
aagaaagatttggacaaatcaagggaaagatccagagagagagagaagaaagaggaaaag
gacaggaaagaccgaaaaagggatcattcaaacagtgaccgagaggtaccacaggattca
actaaacgacgcaaagaggaaaacgggacaactggttcttcaaaacatagcaaaagtgaa
agtccttctgattctcctcgctcaaatgaaaaagagaaggagaagagcaaatcaaaatct
tcaggaaaggaaaaaggtgattcaatcaaagcagaaaagatggagaagagctcctctggt
agcaaaaaggaatcaagacatgataaagaaaaaacagaaaagaaagaaaaacgagatagt
gctggagggaaagaagaaaagaaacatcataaatcttcagacaagcacagataa
DBGET
integrated database retrieval system
