Cygnus atratus (black swan): 118245386
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Entry
118245386 CDS
T09349
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118245386 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cata03019
]
118245386 (CSTF2)
Messenger RNA biogenesis [BR:
cata03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
118245386 (CSTF2)
U7-dependent histone pre-mRNA processing factors
118245386 (CSTF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
118245386
NCBI-ProteinID:
XP_035397448
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MAGLAVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVN
PEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTSVPPLIPGNQQPVPGPGPGPGPGPGPNAQLNPQNTPSSQPQPIGG
MHVNGAPPLMQPPMQGGVPAPGQMAAAVQGPGPGPMAPGGGLQPQVGMPGGGPVPLERGQ
VPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGAPM
HHMPGHDSRGPPHEMRGGPMGEPRPLMGEPRGPLMDARVGRDPRGLEPRGLEPRGLEPRV
MEARGLEARGLEPRVLEPRVLEARAMEARVMEPRGLEPRGPGPNPRGPMPGGIQGPGPLN
MGASGPQGPRQVPNMAGAGMQGGGIPGAGVQGAGQPGGFSPGQSQVTPQDHEKAALIMQV
LQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctggcggtgcgagacccggccgtggaccgctccctgcgctccgtcttcgtg
gggaacatcccgtacgaggccaccgaggagcagctgaaggacatcttctccgaggtcggg
cccgtggtcagcttcaggctggtgtatgacagggagacgggaaagccgaagggatatggc
ttctgtgagtaccaggatcaggagacggccctcagtgccatgcggaacctgaatgggcga
gagttcagcgggagggccctgcgtgttgacaacgcggccagcgagaagaacaaggaggag
ctgaagagcttgggcacgggtgcacccatcatagagtcaccctatggggaccctgtcaat
cctgaagatgcccctgagtccatcagccgagcagttgccagcctgccacccgagcagatg
tttgagctgatgaagcagatgaagttgtgcgtccagaacagtccccaggaagccaggaac
atgctgctgcagaacccccagctggcttacgccctgctgcaggcccaggtggtaatgagg
atcgtcgacccggagatcgcactgaaaatcctgcatcgccagaccagcgttcctcctctg
atcccaggcaaccagcagccagtgccaggacctgggccaggaccgggaccggggccaggg
ccaaatgcccagctgaacccacagaataccccatcgtcccagccccagcccatcggtggc
atgcacgtaaacggcgctccccctctgatgcagccgcctatgcagggaggagtgccggca
ccgggacagatggcagccgctgtgcagggccctggccctggccccatggctccaggaggt
gggctgcagccgcaggtcgggatgccaggaggagggcccgtgcccctggagcgtggacaa
gtgcccatgccagacccgagggcccctatgcagcgtggacctctacctgctagtggcccg
ccgccgcgaggccttttgggagatgccccgaatgaccctcgcggagggacgctgctctca
gtcactggagaagtggagcccagaggttaccttgggccgccccaccaaggagcccctatg
caccacatgccgggccatgacagccgtggccccccccatgagatgagggggggacccatg
ggagaaccccgaccactgatgggagagccgcgggggcccttgatggatgctcgagttggg
agggatccccgagggctggagccgcgaggattggagccacgagggctggagccccgcgtg
atggaggcccgaggcctggaggcccgaggcctggagccgcgggtcctggagccacgcgtg
ctggaagccagggccatggaggccagggtcatggagccccgtggcctggagcctcgaggg
cctggtcccaacccacgtggcccgatgcctggtgggatacagggtcctggaccgcttaac
atgggagccagcggcccacaggggccccgccaggttcctaacatggcaggggcaggcatg
caaggaggaggcattcctggagcaggggtccagggagctggtcagcccggaggctttagt
cctggacagagccaggtcaccccccaggatcatgagaaggcagccctgatcatgcaggtt
ctgcagctgacagcagaccagatcgccatgctgcccccagagcagcggcagagcatcctt
attctaaaggagcaaatccagaaatccacgggggcaccctga
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