Cygnus atratus (black swan): 118245444
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Entry
118245444 CDS
T09349
Symbol
GABRE
Name
(RefSeq) gamma-aminobutyric acid receptor subunit epsilon
KO
K05185
gamma-aminobutyric acid receptor subunit epsilon
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04080
Neuroactive ligand-receptor interaction
cata04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118245444 (GABRE)
04082 Neuroactive ligand signaling
118245444 (GABRE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cata04040
]
118245444 (GABRE)
Ion channels [BR:
cata04040
]
Ligand-gated channels
GABA-A
118245444 (GABRE)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
118245444
NCBI-ProteinID:
XP_035397528
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Position
13:10724556..10752167
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AA seq
455 aa
AA seq
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MPGTVLLLCLALGPALRPARCESTEEYDYDYLSINKTWVLTPKTQETDATQILNSLLKNY
DNKLRPDIGIKPTFIDVDIYVNSIGPVSVIQMEYTIDIFFAQTWYDRRLRFNSTLKALTL
NTNMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWNDGKVLYTLRLTIEAECLLQLQNF
PMDTHSCPLVFSSYGYPREEIVYRWRRYSIEVSDQRTWRLYQFDFTGLRNTSEVLRTGAG
EYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDSTPARTSLGITTVLTMTT
LSTISRKHLPRVSYITAMDLFVSVCFIFVFAALMEYATLNYLVGNKKPLEHNSRKARLPP
AGAQVMPSFTAININNIMHWPPEIEDDEDEDPGSPCLEGKECERFFCCIEDCQTGMWREG
RVRIHISRLDSYSRVFFPTAFLLFNIVYWIAYLYL
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggacggtgctgctgctctgcctggccctcgggccggccctgcgccccgccagg
tgtgagagcacagaggagtatgattacgattacctcagcatcaataaaacctgggtcctc
acccccaagacacaggagactgatgccacgcagatcctcaactcactgctgaagaactac
gacaacaagctgaggcctgacattggcatcaagcccacgttcatcgacgtggatatctac
gtgaacagcatcgggccggtgtctgtcatccagatggaatacaccattgatatattcttt
gctcagacgtggtacgaccggcgtctccgtttcaacagcaccttgaaggccctcacgctg
aacaccaacatggtgagccgcatctggatcccagacaccttttttaggaactccaagcgg
gctgattcccactggataaccactcctaatcagctcctccgcatttggaacgatggcaaa
gtgctctacacgctcaggctgacaatcgaggctgaatgcctgctccagctgcagaatttc
ccaatggacactcactcctgccctttggttttctctagttatggctacccacgtgaggag
attgtctatcgctggcggcgctattccattgaggtctctgaccagcgcacctggaggctc
taccagtttgacttcacggggctgaggaacacctcggaagttctcaggactggggcaggg
gaatacatggtgatgacagtttcttttgacctaagtagacgtatgggttattttgccatt
cagacctatattccctgcatcctgactgttgttctctcctgggtttccttctggatcaag
agagactctacaccagccaggacttctctgggtattaccactgtgctaacaatgaccact
ctgagtaccatctcccgcaagcaccttccccgtgtttcctacatcacagccatggacctc
ttcgtctccgtgtgcttcatcttcgtcttcgcagctctcatggagtacgctacactcaac
tacttggtgggaaacaagaaaccactggagcacaacagcaggaaagctaggctgccacct
gctggcgcacaggtgatgccatccttcactgccatcaacatcaacaacatcatgcattgg
cccccagagatagaggatgatgaagatgaagaccctggctccccgtgcctggaaggaaag
gaatgtgagaggttcttctgctgcattgaggactgtcagacagggatgtggcgggagggg
agggtccgcattcatatctcccgcctggactcctactcccgtgtcttcttccccaccgcc
ttcctgctcttcaacattgtctactggattgcatatctctatctctag
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