Cygnus atratus (black swan): 118245508
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Entry
118245508 CDS
T09349
Symbol
BRCC3
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36 isoform X1
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03440
Homologous recombination
cata04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118245508 (BRCC3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118245508 (BRCC3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cata01002
]
118245508 (BRCC3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118245508 (BRCC3)
03036 Chromosome and associated proteins [BR:
cata03036
]
118245508 (BRCC3)
03400 DNA repair and recombination proteins [BR:
cata03400
]
118245508 (BRCC3)
Peptidases and inhibitors [BR:
cata01002
]
Metallo peptidases
Family M67
118245508 (BRCC3)
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
118245508 (BRCC3)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
118245508 (BRCC3)
BRISC complex
118245508 (BRCC3)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
118245508 (BRCC3)
DNA repair and recombination proteins [BR:
cata03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
118245508 (BRCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
TEDC1
Motif
Other DBs
NCBI-GeneID:
118245508
NCBI-ProteinID:
XP_035397646
LinkDB
All DBs
Position
13:11211512..11216663
Genome browser
AA seq
261 aa
AA seq
DB search
MAVQAVHLEADAFLVCLNHALSTEKEEVMGLCIGQVDAGRVVHVHSVIILRRSDKRKDRV
EISPEQLSAASTEAERLAEMTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFV
GLIFSCFIEDKNTKTGRILYTCFQSIQAQKSSEYERIEIPIHVVPHETIGKVCLESAVEL
PKILCQEEQDAYRRIHSLTHLDSVTKIHNGSVFTKNLCSQMSAISGPLLQWLEDRLEQNK
QRVQELQQEKERLLEELAALE
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaggcggtgcacctggaggccgacgcgttcctggtgtgcctgaaccacgcg
ctgagcaccgagaaggaggaggtgatggggctctgcatcgggcaggtggacgccggccgc
gtcgtgcacgtgcactccgtcatcatcctgcggcgctccgacaagaggaaggaccgcgtc
gagatctcgcccgagcagctctcggccgcctccaccgaggcggagaggttggctgagatg
acggggcgccccatgagagtggtgggctggtaccactcccaccctcacatcaccgtctgg
ccctcgcacgtcgatgtccgcacacaagccatgtatcagatgatggaccagggctttgta
gggctcatcttctcctgcttcattgaagacaaaaacacaaagacaggcaggattctctac
acctgtttccagtccattcaggcccagaagagctcagaatacgaaaggattgagattcct
attcacgttgtcccgcatgaaaccattgggaaggtgtgtctggagtcagctgtcgagctg
cccaagatcctgtgtcaggaggagcaagacgcctacaggaggattcacagcctcacccac
ctagactccgtgaccaagattcacaatggctcagtgttcacaaagaacctctgcagccag
atgtccgccatcagcgggcccctcctgcagtggctggaggacaggctggagcagaacaag
cagcgggtgcaggagctgcagcaggagaaagagcggctcctggaggaactcgctgcttta
gagtga
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