Cygnus atratus (black swan): 118245519
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Entry
118245519 CDS
T09349
Symbol
RLIM
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X3
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118245519 (RLIM)
Enzymes [BR:
cata01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118245519 (RLIM)
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118245519 (RLIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING-like
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
118245519
NCBI-ProteinID:
XP_035397679
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All DBs
Position
13:4401001..4414573
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AA seq
594 aa
AA seq
DB search
MESSDSSDKGNIDQSEARQSQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEITE
EELLRRLHQVKEGPPQQNSDENRGAESAEDVSNGDSIIDWLNSVRQTGNTTRSGQRGNQS
WRAVSRTNPNSGDFRFSLEINVNRNNGNTNPETENEPSVEPSSGEDLENSQSDSEIPRSE
SPSVRQPGSERGTSEELTTEEASPPRGQRRARSRSPEQRRTRARTDRSRSPINPVSEATR
RSHHNTSSQTLDHSSVSEAEGSSRTRQHVTLRQHTVGTEMPSENAVLFSAPETRPVPQAA
GSSETNGASESATPGQRPPTIVLDLQVRRVRPGEYRQRDSIANRTRSRSQTPNNTVTYES
ERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELSY
FMYSDSDADPSGPTPNQNVDASEPQNGGGGSSSNESTDVSSGEVYEGGNEGGSTSGARRE
GRNTRGSVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLAMRNFGESDALKTC
SVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRESVV
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggagagctcagattctagtgataaaggaaatatcgatcaatccgaagcacgtcagagt
cagctagatcggttagatcgagaagaagctttctatcagtttgtaaacaacctgagtgaa
gaggactacaggcttatgagagataacaatttgctaggaacaccaggtgaaattactgaa
gaagagttgctgagaaggctacaccaagttaaagaaggtccgccacagcaaaacagtgat
gagaatagaggtgcagagtccgcagaagatgtttcaaatggagattctataatagactgg
cttaattcagtccgacagactggaaatactacacgaagtgggcaacgaggaaaccaatct
tggagagcagtgagccggactaacccaaatagtggtgacttcagattcagtttggaaata
aatgtcaaccgtaataatgggaacacaaatccggaaactgagaatgagccatctgtagag
ccttccagtggggaggatttggaaaacagccaaagtgactctgaaattccaaggtctgaa
tcaccgtctgtaaggcagcctggatcagaaaggggcacttcagaggagctaacaactgag
gaagcctctcctcctagagggcagaggagagcgagaagtaggagcccagaacagcggagg
acacgggctaggactgatagaagtaggtcacctattaatccagtgagtgaggctactcgc
aggtctcatcacaatacatcatctcaaacgcttgaccattcctcggtgagtgaagctgag
ggaagctctagaactaggcagcatgtgacattaaggcagcatacagtggggactgagatg
ccaagtgaaaacgcagttctgttttcagcccctgaaacaagacctgttcctcaagcagca
ggttcttcagaaactaatggtgccagtgagtctgcaactcctgggcagaggcctcctacc
atagtgcttgatcttcaggtgagaagagttcgtcccggagagtatcggcaaagggacagc
atagccaacagaactcggtcccggtcccagacccctaacaacacggtcacttacgagagc
gaacggggagggtttaggcgcacgttttcacgttcagaacgggctggagtgagaacttac
gtcagtaccattaggattcctattcgtaggatcttaaacacaggcttgagcgagactaca
tcagttgctattcagactatgctgaggcagataatgacaggctttggagagctgagttac
tttatgtatagtgatagtgatgcagatcctagtggcccaactccaaatcagaacgtggat
gcttccgagccacagaatggaggtggtggtagttcaagcaatgaaagtacggatgttagc
tcaggggaggtgtacgaaggtggtaatgaaggtggttcaacatctggtgccagacgggaa
ggtcgcaatacaagaggatcggtcacgtttgaagaaagtggttctctaccattccttagc
ctagcacaatttttcctactaaatgaagatgatgatgaccaaccaagaggactcaccaaa
gaacaaattgacaacctagcaatgaggaattttggtgagagcgatgctctgaaaacctgt
agcgtgtgtattacagagtacaccgaaggcaacaagcttcggaaactgccttgttctcac
gagtatcatgtccactgcatcgatcgctggttatcagaaaattccacttgtcccatttgt
cgcagagcagtcttagcgtctggtaacagagagagtgttgtctaa
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