Cygnus atratus (black swan): 118245532
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Entry
118245532 CDS
T09349
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118245532 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118245532 (ATRX)
03036 Chromosome and associated proteins [BR:
cata03036
]
118245532 (ATRX)
Transcription factors [BR:
cata03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
118245532 (ATRX)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
118245532 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
118245532
NCBI-ProteinID:
XP_035397695
LinkDB
All DBs
Position
13:3833011..3919289
Genome browser
AA seq
2425 aa
AA seq
DB search
MITLGESKLNTLVQKLHDFLAHSSEESEDANSPPASSKNKTIGESREPESSPTSMENNRE
EGSSSSERTKSLGSSRSKRKPTIVTKYVGSDDEQILDETVNEDNSNENSENDVDMKSLPK
GTVVVQPEPVLNEDKDDFKGPEFRSRNTVKMKPEAPKKRGEEGLHGIVSCTACGQQVNHF
QKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCK
KCILRNLGRKELSTIMDENNQWHCYICHPEPLLDLVTACDSVFENLEQLLQQNKKKIKVE
SEKSKIYDHTVKFSPKRNNSNCNGEEKKLDDSYSGSLTYSYKALMVPKDMLKKTKKLVET
TANMNSSFVSFLKKAAENLEISPAMQLRQLKAFKSVLGDIKKCHLALEEGLNLEIQALDI
KIKEKNTKEKKTDVRSEKNEVKKDEGKEHAALEEDDTVKKQEEVASEQPDNEPMDQSVPT
MEQTDNKRATGEEKKSGTNEEPQYEPNSTEALDMDIVSVPSSVPEDIFETLESAMEIQTT
ADEQGSGNAGTDHETLNSNTKLNTPLKDTKSGTKLKASAKGTKELVVKLTPVSLSESPVK
DEDSSLEKGSKDVDALPTTENCDSVKQNHNAGSERSTENETISPAEESDLRRSPRVKTTP
LRRQTDMNPLTSNSEEDSNDTCNEKRKRKSSKQPRRKKDKRNSSESTVDGPSPNKLSKSK
KPDILDNSSDSDEMPAVLKEVAMMSRSSSDIDSNGEALANDQKPLNVLKKEPVKDENGKR
KRKSSSSGSDLDAKRGKSAKNSAVAKKKRQNYSDSSNYDSELEKEIKSLSKIESAKKAKK
KYFRKDDSYDSSEEEQRKKVSKRKTNLKKQRGKSSEDDAAEKSPPEKEINHSSEDKKISV
GLDVKEEVNTDLEEKAVKGKQDVSSDVEKSLLEKEESSPKGAKLSEVKKNKDLKKKKAQE
DSSSESAEKHAKKEQNLDSPKEKFKNKKRLERKEKKSENLKKKSFKKEHDDSSSDVEKSS
PEKGSCNSSENDKTKNETMAKEKKRRNLRERGSKREQIDLSSDAEKSPLKEESSSEDAVR
NKNQSETKEKKKISHKKKITKKEQNDSSSSDEESYEDNKKKIKRGSVKESKKNNLKEKKK
MSKKVVVTSSSSSDKEENDEQNSTGDGSSDEQKIMPVTENLMLSAGTGFCQSSGDEGDPK
SRAVPMEEEEDDDDDDPENRIAKKMLLEEIKANLSSDEDASSDEESDEGKKKTGKQNENT
ADDEENEKEKDNSESDSEEEDSKKPRYRHRLLRHKLTVSDGESGEEKKGKTKDTKEGKRR
NRRKVSSDDSNESEFHESAVSEEVSESEDDQRPRTRSAKKAEAEENQRSYKQKKKRRRIK
VQEDSSSENNNKSNSEDEENDDSKSPGKGRKKIRKIIKDDKLRTETQNALKEEEERRKRI
AEREREREKLREVIEIEDASPLKCPITTKLVLDEDEETKEPLVQVHRNIVTRLKPHQVDG
VQFMWDCCCESVKKTKTSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFRTALVVCP
LNTALNWLNEFEKWQEGFEDDEKLEVCELATVKRPQERSYMLQRWQDEGGVMIIGYEMYR
NLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILT
GTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTLVDVRVMKKRAHIL
YEMLAGCVQRKDYTALTKFLPPKYEYVLEVRMTPIQCKLYQYYLDHLTGVGSGNEGGRGK
AGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSLDDFIASDSDETSMSLSSDDY
AKKKKSKGKKVKKECSSSGSGSDNDVEVIKVWNSRSRGGGEGNVEELVNNPPSVTKSDEG
KATSSSNPGSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEELGDKVLVFSQSLIS
LDLIEDFLELANREKTDKDKAPIYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEEFNDETN
VRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQNKPVFVYRFLA
QGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRD
TPMLPKDTILAELLQINKEYIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLTM
RFNMPTGTNMLPTNFNSQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEATNNVTAARI
QPLEDIISTIWKENVTLTESQVQALALSRQASQELDVKRREAIYNDVLTKQQMLIGCVQR
ILMNRRLQHQYNQQQQQQMSYQQAAMSHLMMPKPPNLIMNPSNYQQIDMRGIYQSVSGGM
QPPPLQRAPPPMRGKNPGPSQGKSM
NT seq
7278 nt
NT seq
+upstream
nt +downstream
nt
atgataacgttaggtgaaagcaagttgaatacattggtgcagaaactccatgacttcttg
gctcactcatcggaagaatctgaggacgcaaattctcctccagcatcatctaaaaacaaa
accataggtgaaagtagagaacctgagagcagtccaacatcaatggagaacaacagagaa
gagggcagcagctcttcagaaagaacgaaatccttaggatcatcacgttcaaaaaggaaa
cctacaattgtaacaaaatatgtcggatcagatgatgaacaaatcttagatgagactgta
aatgaagataattcaaatgaaaactcagaaaatgatgttgatatgaaaagcttgcctaaa
ggtacagtggttgtacagcctgagccagtgctgaatgaagacaaagatgattttaaaggg
cctgaatttagaagcagaaataccgttaaaatgaaacctgaagctcccaaaaagcgtgga
gaggaaggactccatggaattgtaagctgtacagcttgtgggcaacaggtgaaccatttt
caaaaggattcaatctatagacatcctacactgaaagttcttatttgtaagacttgctac
aagtattacatgagtgatgacataagccgtgattcagatggaatggatgaacagtgtagg
tggtgtgctgaaggtggaaacttgatttgctgtgacttttgccataacgccttctgtaaa
aagtgcattttgcgcaacctgggtcgaaaggagctatcaactataatggatgaaaataat
cagtggcactgctatatttgccatccagagcctctgttggacttggtcactgcttgtgac
agtgtctttgaaaacttggaacagttactgcagcaaaacaaaaaaaagatcaaagtggaa
agtgaaaaaagtaaaatatacgaccacacagtcaaattttctccaaagagaaataattca
aattgcaatggtgaagaaaaaaaactagatgattcatattcaggttcactgacatactct
tacaaagcactgatggtgccaaaagacatgcttaaaaaaacaaaaaaactagttgagact
acagcaaatatgaattctagctttgtaagctttttgaaaaaggctgcagaaaatttagaa
ataagcccagctatgcagcttcgtcagctaaaagcttttaaatctgtgctgggtgacatc
aaaaaatgtcacctggcactagaagaaggtctgaacctggagattcaagctttggatatt
aaaatcaaagagaaaaataccaaagagaaaaaaactgatgttagatcagaaaaaaatgag
gtgaagaaagatgaaggaaaggaacatgcggcattagaagaggatgacactgtaaagaag
caggaagaagttgcatcagaacagcctgacaatgagccaatggatcaaagtgttccaaca
atggaacaaacagataacaaacgtgcaactggtgaagagaaaaagtctggcacaaatgaa
gaacctcagtatgaacctaatagtacagaggctttagacatggatatagtgtctgttccc
tcatccgttcctgaagatatttttgagactctagaatctgctatggaaattcagactaca
gcggatgagcaaggcagtggaaatgcaggaacagatcacgagactctaaattcaaatacg
aaattgaacactcctttgaaagataccaaaagtggaactaagttaaaagcttcagctaag
ggaacaaaggaactggttgtaaaactgactccagtttccctttcggagtctccagttaaa
gatgaagacagcagtctcgagaagggaagtaaggatgttgatgcattacctacaacagaa
aactgtgactctgtaaaacaaaatcataatgctggcagtgagcgttccacagagaatgaa
accatttcacctgcagaggaatctgatctcaggagatcaccccgtgtgaagaccacgcct
ctgaggcgccaaacagacatgaatcctttaacgtcaaattcagaagaagatagcaatgac
acgtgtaatgaaaaacgtaagagaaaatcatcaaaacaaccaaggaggaaaaaagataaa
agaaactcttctgagagtactgttgatggtcctagccctaataagctttctaaatcaaaa
aagccagatatattagataatagctcagattctgatgagatgccagctgttcttaaagaa
gtagctatgatgagtcgcagttcttcggatattgatagcaatggcgaagcactagcaaat
gatcagaagcctttaaatgttctgaagaaagaaccagtaaaggatgaaaatggaaaacga
aaaagaaaaagttccagttctggttcagatttagatgctaaaaggggcaaatctgccaaa
aattctgctgttgcaaaaaagaaacgacagaactattcagattcttcaaactatgattct
gagttagaaaaagagataaaaagcttgagtaaaattgagtctgcaaaaaaagctaagaaa
aaatacttcagaaaagatgacagttatgattcctctgaggaagagcagaggaagaaagtt
agcaagagaaagacaaatctgaagaaacagagaggtaaatcttctgaagatgatgctgct
gaaaagtcacccccagagaaggagattaatcattcttctgaagataaaaaaattagtgtg
gggttggatgttaaggaagaggtaaacacagacttggaagaaaaagctgtaaagggaaag
caagatgtgtcttctgatgttgagaagtctttactggagaaagaggagagctctcctaaa
ggtgcaaagctaagtgaagttaagaaaaacaaggatttgaagaaaaaaaaggcacaggaa
gattcctcttcagagagtgctgagaaacatgcaaagaaagaacaaaacttggattctcca
aaagagaaattcaagaacaaaaaaagattagaaagaaaagagaagaaatctgaaaatttg
aaaaagaaaagcttcaagaaagaacatgatgattcctcttctgatgttgaaaagtcgtcc
ccagagaaaggaagttgcaattcttctgaaaatgataaaactaaaaatgaaacaatggct
aaagaaaagaaaaggaggaatttaagagagagaggatctaaaagagaacagattgatttg
tcttccgatgctgagaaatctcctctgaaagaggagagttcttctgaagatgctgtgcgg
aataaaaaccaaagtgaaactaaagaaaagaaaaaaataagtcacaaaaagaaaatcacc
aagaaagaacagaatgactcatcctcttctgatgaggaatcttatgaagacaataagaaa
aagattaaaagagggtcagtgaaagaaagtaaaaagaataacttaaaagagaaaaagaaa
atgtcaaaaaaggttgttgtcacttcttcatcctcatctgataaggaagaaaatgatgag
cagaattcaacaggtgatggaagcagtgatgagcagaaaattatgccagtgactgaaaat
ttaatgctgtctgctggcacaggattttgtcagtcatcaggagatgagggagaccctaaa
tcaagggctgttccaatggaggaggaggaagatgatgatgatgacgatcctgagaataga
attgccaagaaaatgcttttagaagaaatcaaagccaatctttcctctgatgaggatgca
tcttcagatgaagagtcggatgaaggaaaaaagaaaactggaaaacaaaatgaaaacaca
gcagatgatgaagagaatgaaaaggagaaggataattctgaatcagattcagaggaagaa
gactcaaagaagcccagatacagacacagactgctgagacacaagctgacagtgagtgat
ggagaatctggtgaagaaaaaaaggggaaaactaaagacacaaaagaagggaagcgcaga
aatagaaggaaagtgagcagcgatgattcaaatgaatcggagtttcacgaatctgccgtt
agtgaagaagtcagcgagtctgaagatgaccagcgtccaagaacaagatctgccaagaaa
gctgaggcagaagaaaaccagcgcagttacaaacagaaaaagaaacggaggcgtataaag
gttcaagaggattcttcaagtgaaaacaacaacaagagtaattctgaagatgaagaaaac
gacgattcaaaatctcctggaaaaggcaggaagaaaataaggaagattattaaagatgat
aagcttagaacagaaacacaaaatgcacttaaagaggaagaagaaagaagaaaacggata
gcagaaagagaacgggagagagagaagttgagagaggtgatagagatagaagatgcttca
cctctgaaatgtcccattacaactaagctggttttagatgaagatgaagaaacaaaagaa
ccattagtgcaggttcacaggaatatagttaccagactgaaaccacaccaagtagatggt
gttcagttcatgtgggattgctgttgtgaatctgttaaaaagacaaagacgtctcctggt
tcaggatgcattcttgctcactgtatgggtctggggaaaacattacaggtagtaagtttt
cttcacacggtcttgctttgtgacaagctggatttccggacggctctggtagtgtgtcca
ctgaacaccgccttgaactggttgaatgagtttgaaaaatggcaagaaggttttgaagat
gatgagaaattagaggtctgtgaactagcaactgtgaaacgcccccaagagagaagctat
atgctccagcgttggcaagatgagggaggtgtgatgataataggctacgagatgtatcgt
aatcttgcacaaggcaggaacgtgaagagtagaaaacttaaagaaatatttaataaagct
ttagttgatccaggccctgactttgttgtttgtgacgaagggcacatattaaaaaatgaa
gcatctgctgtttctaaggcaatgaattctattcgatccaggagaagaataatccttaca
ggaacaccactgcaaaataatcttatagaatatcactgcatggttaactttattaaggag
aatttgcttggttccattaaagaattccgaaatcgattcataaatccaattcagaacggt
cagtgtgcagactccactctggtagatgtcagagtaatgaagaagcgtgcacacattctc
tatgagatgttagctggatgcgttcagaggaaagattacacagcgttaacaaagttcctc
ccaccaaaatatgagtatgttctagaagttagaatgacacctattcagtgcaaactctac
caatactacttggatcatttgacaggtgtaggtagtggcaatgaaggtggacgaggcaaa
gctggagctaaactatttcaggatttccagatgttgagcagaatctggactcacccctgg
tgtttgcagctggactacattagcaaagaaaataagggctattttgatgaagacagtctg
gatgacttcatagcttcagattctgatgaaacttcaatgagtttaagctctgatgattat
gcaaagaaaaaaaaatccaaggggaaaaaagtgaagaaagagtgtagctcaagtgggagt
ggcagtgataatgatgtagaagtcataaaagtctggaattcaagatctcgtggaggtgga
gaaggaaatgtagaagaacttgtaaacaatcctccgtctgttacaaaatcagatgaaggt
aaagctacatcttcttcaaatcctggtagcccagctccagactggtacaaagatttcgtc
actgatgcagatgctgaagtgttggaacattctgggaaaatggtgcttctctttgaaatt
cttcgaatggcagaggagcttggggacaaagtcctagtatttagccaatccctaatatca
ctggatttgatagaagattttctggagctggccaacagggagaaaactgacaaagataag
gctcctatttataaaggtgaaggaaaatggttcagaaacattgattactatcgcttagac
ggctcaactacagctcagtcaagaaagaaatgggctgaagaatttaatgatgaaactaat
gtgagaggccgcttgtttattatctccactaaagcaggctcccttggaattaatcttgtg
gctgctaatagagtaatcatctttgatgcttcttggaacccgtcgtatgatatccagagt
attttcagggtttaccgctttgggcagaacaaacctgtgtttgtgtacaggtttttggct
cagggaacgatggaagataagatctatgatcgacaggtaacaaagcagtcgctgtctttc
cgggttgttgaccaacagcaagttgaacgtcatttcacaatgaatgagctcacagagctg
tatacctttgagccagatttgctagatgatcctaattcagaaaagaaaaagaagagagat
acaccgatgctgcctaaagatacaattctggcagaattgcttcagatcaataaagagtat
atagttggatatcatgaacatgattcgctcctggaccataaggaggaagaggagctcact
gaagaagaaaggaaggcagcatgggcagaatatgaagcagaaaagaagggcttgaccatg
cgtttcaacatgccgactgggaccaacatgcttcccacaaatttcaactctcagacccca
tatattcctttcaatttgggtgctctgtcagcaatgagcaaccagcagctggaggacctc
attaatcaaggaagagagaaagttgtggaagcaaccaacaatgtaactgcagcaagaatt
cagccccttgaagacatcatttcaacgatatggaaagagaatgtaacactcacagagagc
caagtacaggcgctggccctaagcaggcaggcaagccaggagcttgatgttaagcgccga
gaagccatctataacgacgtccttactaaacaacagatgttaatcggttgtgttcagagg
atacttatgaacagaagactacagcatcagtacaatcagcagcaacagcagcagatgtct
taccagcaagcagcaatgagtcatctcatgatgccaaagcctccaaatttaatcatgaat
ccttccaactaccaacagatagatatgagaggaatatatcagtcagtgtcgggtggtatg
caaccaccacctttacaacgagcaccacccccaatgagaggcaaaaatccagggccttcc
caagggaaatcaatgtga
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integrated database retrieval system
