Cygnus atratus (black swan): 118245544
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Entry
118245544 CDS
T09349
Name
(RefSeq) transcription factor SOX-3-like isoform X1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118245544
Transcription factors [BR:
cata03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
118245544
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
118245544
NCBI-ProteinID:
XP_035397728
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All DBs
Position
13:10390813..10391799
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AA seq
305 aa
AA seq
DB search
MYSMLEAEIKTPQPTPGSGGGGGASGGAGAGSDQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGADWKLLSDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDK
YSLPGNLLAPGGGNAVSSPVGVGQRIDTYAHMNGWTNGAYSLMQDQLGYSQHPGMNSPQL
QQMHRYDMTGLQYSPMMSTAQTYMNAASTYSMSPAAYGQQPSTAMSLGSMGSVVKSEPSS
PPPAITSHSQRACLGDLRDMISMYLPPGGDATDPSALQGSRLHSVHQHYQSAGTAVNGTV
PLTHI
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgctggaggctgagatcaagacgccgcagcccaccccaggcagcggcggc
ggcggcggggccagcggcggagccggggccggctcggaccaggaccgggtgaagcgcccc
atgaacgccttcatggtgtggtcgcggggccagcggcggaagatggcccaggagaacccc
aagatgcacaactcggagatcagcaagcgcctcggggccgactggaagctgctgagcgac
gccgagaagcggcccttcatcgacgaggccaagcggctgcgggccgtgcacatgaaggag
tatccggattacaaataccggccccgacggaagaccaagaccttgctgaagaaggacaaa
tactcgctgcccggcaacctgctggcccccggggggggcaacgcggtgagcagccccgtc
ggggtgggccagaggattgacacgtacgcccacatgaacggctggaccaacggggcttac
tccctgatgcaagaccagctgggctacagccagcacccgggcatgaacagcccgcagctg
cagcagatgcaccgctacgacatgacgggcctgcagtacagccccatgatgtccacggcg
cagacctacatgaacgccgcctccacctacagcatgtcccccgccgcctacggccagcag
ccctccacggccatgagcctgggctccatgggctccgtggtgaaatccgagcccagctcg
ccgcccccggccatcacctcccactcgcagagggcctgcctgggagacctgcgggatatg
atcagcatgtacctgcccccggggggggacgccacagacccttcggccctgcagggcagc
aggttacacagtgtgcaccagcactaccagagcgccgggactgccgtcaatggcaccgta
ccgctcacccacatatag
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