Cygnus atratus (black swan): 118245555
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Entry
118245555 CDS
T09349
Symbol
PCDH19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cata04515
]
118245555 (PCDH19)
Cell adhesion molecules [BR:
cata04515
]
Cadherins
Protocadherins
118245555 (PCDH19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
118245555
NCBI-ProteinID:
XP_035397747
EnsemblRapid:
ENSACYG00000009117
LinkDB
All DBs
Position
13:14743805..14802586
Genome browser
AA seq
1090 aa
AA seq
DB search
MGALPALLGAALLWAGAGALVNLKYSVEEEQRAGTVIANVAKDARDAGFVIDPRQPTAFR
VVSNSAPHLVDISPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIKDL
NDNAPSFPTDQIELEISETASPGTRVPLESAYDPDSGSFGVQSYEITPNDLFGLETKTRG
DGSRFAELVVEKSLDRETQSHYSYVITALDGGDPPNFGTVELSIRVIDSNDNNPLFEEPA
YTVSVPENAPLGTPVIRLNASDPDEGTNGQVLYSFHSYVSERARELFQIDPQSGLITVSG
AIDYEEGHVYELDVQAKDLGPNSIPAHCKVTISVQDANDNPPLINLLSVNSELVEVSENA
PPGYVIALVRVSDRDSGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLT
IQAKDNGVPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDL
GLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPS
LQSNATVRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGR
LSYEMVEGDRGFFEIDQVNGEIRTTRAFGENAKTAYELIVVAHDHGKTSLSASALILIYL
SPALDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSY
GHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSE
STFLNVESQNNRNAGSNHIYHHTFAGQSPQQPDLIINGMPLPETENYSFDSNYVNSRAHL
IKSSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDVLNTSVPSMGSQGPEP
DQSEGFHCREECRILGHSDRCWMPRSAVPSRAKSPEHGRNVIALSIEATAVDAEPYADCS
AKRTFATFGKEGGEPPAEERAGNPKGKRTVEPAAGSPKVSGAVREAGNGCEAASPVTSPL
HLKSPAAYGGLPCPAGRGPQPPANTGPARPAEAEPRGADSEGGLQEGNPLLQDRREKDSP
AARRLRDIVL
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgggggctctcccggcgctgctgggggccgccttgctgtgggccggcgccggggccctc
gtcaacctcaagtactcggtggaggaggagcagcgggccggcaccgtgatcgccaacgtc
gccaaggacgcccgggacgccggcttcgtgatagacccccggcagcccaccgccttccgg
gtggtctccaactcggccccccacctggtggacatcagccccgggtccgggctgctggtg
accaagcagaagatcgaccgggacctgctgtgccggcagagccccaagtgcgtcatctcg
ctggaggtgatgtccagctccatggagatctgcgtgatcaagctggagatcaaggacctc
aacgacaacgcgcccagcttccccaccgaccagatcgagctggaaatctcagagactgcc
agccccggcacccgggtgccgctggagagcgcctacgacccggactcaggcagctttggt
gtgcagagctacgagatcacccccaacgacctctttgggctggagaccaagacgcgggga
gatgggtcccgctttgccgagctggtggtggagaagagcctggaccgcgagacccagtcc
cactacagctacgtgatcacggcgctggatggtggtgacccgcccaacttcggcacggtg
gagctcagcatccgcgtcatcgactccaatgacaacaacccgctctttgaggagccggcc
tacaccgtcagtgtgcccgaaaacgccccgctgggtacgccggtcatccgcctcaatgcc
tctgacccggatgagggcaccaacggccaggtgctctactctttccacagctacgtctct
gagcgagcccgggagctcttccagatcgacccccagagcggcctcatcacggtcagcggc
gccattgactacgaggagggtcatgtctacgagctggatgtgcaggccaaggacttgggg
cctaactccatccctgcccattgcaaagtgaccatcagtgtgcaggatgccaatgacaac
ccgcccctcatcaacctgctctctgtcaacagcgagctggtggaggtgagcgagaacgcc
ccgccggggtacgtcatcgccctggtgcgagtctcggaccgcgactccggggccaacggg
cgggtgcagtgcaagctcctgggcaacgtgcctttccggctccaggagtacgagagcttc
tccaccatcctggtggacgggcggctggaccgggagcagagggaccagtacaacctcacc
atccaggccaaggacaatggcgtaccctccctacaggccaccaagtccttcaccgtcaag
ataaccgatgagaacgacaaccatccccacttctccaagccctattaccaggtcatcgtg
caggagaacaacaccccaggggcctacctcctctcagtctccgcgagggaccctgacctg
ggcctcaacggcagcgtctcctatcagattgtgccctcccaagtcagggacatgcctgtc
ttcacctatgtctccatcaaccccaactctggagatatctatgctttgaggtccttcaat
cacgaacagacgaaggcctttgagttcaaggtcttggcaaaggacggaggtaatccctct
ctgcagagcaatgccaccgtcagggtgattgtcctggatgtcaatgacaacacgcccgtg
atcacagccccaccactggtcaacgggactgcggaggtgtacatccccaggaacgcgggg
gtcggctacttggtgacagtggtcaaggcagatgactatgacgagggtgaaaatggcaga
ctttcctacgaaatggtggaaggagacagaggattttttgagatagaccaggtcaatgga
gagataaggaccaccagagcctttggggagaatgcaaagacagcctatgagctgattgta
gtggctcatgaccatggaaaaacatctctgtcggcttcagccttgattttgatatacctg
tctccggccctcgatgcccaggagtccataggatctgttaacctctccctcattttcatt
attgccctggggtctattgcggccattctttttgtcaccatgatcttcgtggcagtaaag
tgcaaaagggataacaaggaaatcaggacctataactgcagaatcgcagagtactcctac
gggcatcagaagaaatcaagcaagaagaagaaaatcagcaagaacgatatccgcctggta
ccgcgggatgtggaggagacggataaaatgaacgttgtgagctgctcctctctcacctca
tccctcaactacttcgactaccaccagcagaccctgccgctgggctgccgccgctccgag
agcactttcctcaacgtggagagccagaacaacaggaacgccggctccaaccacatctac
catcacaccttcgcggggcagagcccccagcagcccgacctcatcatcaacgggatgccg
ctgcctgagactgagaactactcctttgactccaactacgtgaacagcagagctcattta
ataaagagcagctccacgttcaaggacttggaggggaacagcctgaaggacagcggccat
gaggagagtgaccagaccgacagcgagcacgacgtgcagcgcggcctctactgcgacacg
gccgtcaacgacgtgctcaacaccagcgtcccctccatggggtcccagggccccgagcca
gatcagagcgaaggatttcattgcagggaagagtgccgcatcctgggccactcggaccgg
tgctggatgccccgcagcgccgtccccagccgcgccaagtcccccgagcacggcaggaac
gtcatcgccctctccatagaggcgacggcagtggacgcggagccttacgcagactgtagc
gccaaaaggaccttcgccaccttcggcaaggagggcggcgagccgccggccgaggagcgg
gccggcaaccccaaaggcaaaagaacggtggagccggccgccggcagccccaaggtgagc
ggcgccgtccgcgaggcgggcaacggctgcgaggccgccagccccgtcacctcgcccctg
cacctgaagagccccgcggcctacggcggcctgccctgccccgccggccgcgggccacag
cccccggcgaacactggccctgcccggcccgcggaggcagagcccaggggggcggacagc
gagggcggcctgcaggagggcaacccgctgctgcaggaccgcagggagaaggactcgccg
gcggccaggagactgagggacatcgtcctctga
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