Cygnus atratus (black swan): 118245674
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Entry
118245674 CDS
T09349
Symbol
CFAP47
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 47
KO
K25552
cilia- and flagella-associated protein 47
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cata03037
]
118245674 (CFAP47)
Cilium and associated proteins [BR:
cata03037
]
Motile cilia and associated proteins
Sperm associated proteins
118245674 (CFAP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASH
Motile_Sperm
PapD-like
TMEM131_like_N
CH
CAMSAP_CH
MYCBPAP
Motif
Other DBs
NCBI-GeneID:
118245674
NCBI-ProteinID:
XP_050568176
LinkDB
All DBs
Position
1:119628834..119937735
Genome browser
AA seq
3321 aa
AA seq
DB search
MEKGIQYLRKLAISEVIYRDLNNKQISTDPDEMYTIHVAEVCTECTIIICQLIGKINGVQ
TITLHHSEEEALRRSAYQPQKCRVEAKSSTGRCLPKRWLLASLTARTAPISAPRPLLNDR
LQAAAAAAMPGGRRDVLGVRIAPALLRFGAALPGRRYRAALSVRNLRAGSCRLRLLPPRR
PQFKLIVENPEKPVAPGLQVKAVVEYYPESEEDLEDRLLLLIEEDVVDIPLLGYGGQKLI
PRCYLETESEINFGTVTANSKVITKEISIANHGSSSGTFKISYDGVVLLNIEPTSGVVEP
DSLTVVKVDICTDVPRVIKEVIKVELEGRGCTEVCIKAVVVEQILKVLGVSCGNVLECIN
FGSVYFGSSKTEQICLYNKSPECMDWVAILEDNGIGGEMGTDLQRSADAVLQDLSLISKT
EDVNVSTLILCFPNQGTLLPYEKSFLTLCFSPKKFKKAFGVNDLSPNQDYVLFLRFEAVG
NKDGYLKACGDGTTPITMNHPHHTELALKGSGIPVMLTFNPGPVIKFMDCFSGEQTQVLC
TLKNESECLPVKFSFRKTAHFNISPEKGKIKKCSTKDVIFSFSPHQIGTFKVKQVVDIIG
TGLEKNNLQVSKTKSFHQIYLSLIGVCKSKPKNILFKINPGITPMISNATGQFVADGTGL
CTDIAPVAILKSTQTQIHTHQINRNCKGDAFIAFPNDRSASIRPSERNKKYRTIFTKTER
YNYIDPQFSYTDYERLLKEVHKEYYANFISSLRQRRLQKDVTRQFYIYNNSVNIGLKPAE
GLVSPQISITDFHKEELQFKMLPLDENCLLTSQRLAASASKSSIKEIWSGLRVMPSSTQE
KEDCSLTLTPKQLHQILIGPSTMDFGDVCVYSTTARKLHIVNNLLVHIWIQIEIEIDELE
QTSPLCQVVPPLTKTYIPVVFETNKLGMFKRSFTYTINNKHPGHVLVIANAVSVELQLSE
RELILNPIPGYLAETEFRTTVRVYNTRNHSAEFTWKPVTTDKGTAFSIQPAKGFVEPYRD
LECEVVWHPGFNSPEAGEFNLCVRKGNTIKLKCFAKLGTTKVQFIEQRIPFSHCPMGLST
CKTAILQNTGYNHAYFQVLHSNPLPGMLITPHDGVVPVGGHAELKILFTPNAKMSFDTRV
EVAVRNSRVLVLRIVGFVETPEIKIDVELFDFGGVYVDSTKSIPFLLQNKGQARTRVEFD
FFKYKDFKLSAKDHSVVESCSSEPYLYSVDLEGKSSLQCSLSFMPKEVAAYDFTLPVNTP
WDDFPLLQQCSISATSVGPVKHTTPPQPQTVTVAVPVCRVKAVVLKSPLEFSSMKLTFTQ
HSSCIRYNSPDESLNSQELDLKNISRQYLTWKLNCDDAGKNIEDGIFKFSLHAGFLDPGQ
KISITVFFCPSCPGTYASEVSVCLDDNPSHYKIILSGIMKSPKINFDPPFLMLMPVPLDV
KTETAINIIPQDYLRSSRIQVELPELELEDGDRIYPFSIQFPEGQDIILSSNGTNMELNC
HISFRSSKPISSLGTIFFTDEEENRFSLQVAATAENCLLTLYPYLAFHLSDQQVTLISNS
KDYSSGEVVLHPRYTPQSLPHSTSSSSFGAITESTYEYSQSGIVYLTLESDEQTSEESEA
DSPSDGRENKSELSFFPDEDKEEYIFFQKALTAVQNWFTLFGWPKGPNPISIPYSLRRDV
CKDQRSSSQENVFKQNLGKDTKTVYDMLFHLSGQLLPGITLSRSLPLDPVEQILQLHWQH
STFLAFLKSQGACLPHVMPEFLLEPDYYKKWIKVQTLLKAHMTELKQGDEKNSDVFSNEH
LFILEDSVFETISKRAWTDVLLQVYKVFVLPRVSSRKTSDPFNLENVLNMPRIKSEPLSS
NIYSPYERIILTWLNKHYEKNRKIVWKDGQKGEVPPMRWIVNFDRDLLDGLVLAAQLAAY
CPYLIATHFVRMYTNAKTPAQFLHNCLILVNAMHAVNLTIDIKATDICDPNPVMMLILCV
YLYESLPHYLPKKTIEFTGALHATVVKQVRLKNPSIKTLVYNTILVGRDADDFSLPKGNT
VIISSNLCMCRERSRGISKMPKDVNLTXIQNKLKLLELIALKINLDFFQHMNTFGNSVAE
MDILKCKSPCYELKKIVLNVTNPFRTDGIFRVILLESTSCLTQPEHIYQARQVKQEQTFS
SENNVINCKNSALPNEPNEENNFNCSDQSSLLHEFFSPMEKLFLTARSSAGLEIHFLPFN
LEKRYCTVILVNELIGEFVYLVEGTGDIPLPSGLLPMDSPNVLHISSTLEGPSAAEPVLY
LKCSLEQTLEENLRIPLINESRERALAIAAQQQMSNIEYERRKITETLDSSSIRVATALL
GLSRIERCELLKPHKFPPELKYVDYSVQVSMQEFFDVPEKLSIPVLASSRVNLKVLSVKD
VSPEKIDGSDAVELPIKFIPQYAGCYCCEILLKSSQDIRVYVIKCVVNTNHAEAEIEFLT
PAYQAVIQDIPINNMSSQDWKFEAVLEGQGFHGPPLINVGIGETALYPLTFKPVAECLSM
GRLILRNVMAGTESIFILKGIGKKPLAQDHIVIDCQVRQVTRKVLWVPNYTKKKLTYKVS
SDLSMVGGAPILTVEPDDTVAYTLSVSPWRRGIFQGVISFVAEDADQQQSQHNSSPEKTD
GEQALQKLSTETPQTVDRANTGGSSSNCKVWFSLKINSTPAAPERMIDVKCRALNTVGIH
IPIMNPTDEILHLSVVLENQSLSGQKSFTLSPKQTFFYQLKFSPAVVGTSDESVIFLSDM
VGEFWYALKLTVEKPLPTNLPEIECELGKWVRLHIPLVNPTRETLELEIANSNPSNFSTE
TDPKHPLIVAPHSTTEVPVQFCPSTLGRGNHKASITFKCSQLIEWIFYLLGTGLPPQLME
PTSISACIFQGSSVIISFKNPTSENVLVDVMLTGQEQSSCHLNASVLTKFPTKESAFHLL
LKQTRGIQLAPKEKLDIPVLFMPDTMKMYEAAVVIHVMRENGENWPYEDSAELSKDLKSF
TVSEDGGIQGILWTYPVHGIPEGPQQKLVPAVVRCQARQRVEKRVEVLLTGAVPGATAMP
ATRNSALINRHKPANIQEEVQVTDGFSTTVEFLYELQYQSNEIKSQLESLVGMHLIQRER
DPESGIITLIFNIVFAPNKPMRNEGTLVVHCTTGGIWKFPVLFIATEPEVDDVINIEAIG
LNKESIVDFKLTSQTRYPEPFTAYFLAGSDPDFLVLPQAGELLPVGTVGTHITVGFKPRM
YGKKHKATLVIQTQSMQWTYEINGLPPQTTPPTRPAKVVSTSGYIRSATVRQRNFLRENL
KLTTTGVSSPIKGAPLVLRTK
NT seq
9966 nt
NT seq
+upstream
nt +downstream
nt
atggagaagggaatccagtacctgaggaaattagccatatcggaggtgatttatagggac
ctaaacaacaaacaaatatccacagatccagatgaaatgtacacaatccatgtggcagaa
gtttgtacagagtgtaccatcatcatatgccagctcattggcaaaatcaatggtgtgcag
accataactctccatcactcggaagaggaggcacttaggagaagtgcctatcagccacaa
aaatgccgcgtcgaagccaagagcagcacgggccgctgcctgcccaagcgctggcttctt
gccagcctcactgcgcgcactgcaccgatcagcgctccgcgtccgctgcttaacgaccgt
ctccaggcagcggcggcggccgccatgccgggcgggcggcgggacgtgctgggggtgcgc
atcgccccggccctgctgcgcttcggggccgcgctgccggggcgccgctaccgcgccgcg
ctcagcgtccgcaacctgcgcgccgggagctgccgcctccggctgctgccgccgcgccgg
ccccagtttaaactgattgtggaaaacccagagaaacctgttgcacctgggcttcaagtc
aaagctgttgtagaatattatcctgagagtgaggaagacctcgaagacagactactactt
ttaatagaagaagatgtagttgatatccccctgcttgggtatggaggtcaaaaattaatt
ccacgctgttatctggaaactgagtctgagattaattttggtacagtgactgcaaacagt
aaagtaattactaaagagattagtattgctaaccatggatcatcatcaggtacatttaag
atatcatatgatggggttgtcttgcttaacatagaacctaccagtggagtggtggagcct
gattctttaacggtggttaaagtggatatctgtacagatgtcccaagagtcatcaaagaa
gtgataaaagtggagttggaaggacgtggctgcactgaagtatgcatcaaagctgttgtg
gttgaacaaattctgaaagttctaggagtgtcttgtggaaatgtattggaatgcattaat
tttggatcggtttactttgggtcttcaaagactgaacaaatatgtttatacaataaaagt
ccagagtgtatggactgggtagcaatactggaagacaatggcattggaggagagatggga
acagatcttcagaggagtgcagatgctgttttacaagatttaagcctcataagtaaaaca
gaagatgtaaatgtttccactttgatcctgtgctttcccaatcaaggaaccttgctacct
tatgagaaatcttttcttacattgtgctttagtccaaagaaatttaaaaaggcctttgga
gtgaatgacttgtcaccaaaccaagattatgtactgtttctgagatttgaggctgttggg
aataaagatggctacctgaaggcctgtggtgatggtaccacaccgatcacaatgaatcat
cctcatcacactgagttggctttgaaaggttctgggattcctgtcatgttaacttttaat
ccaggaccagttattaagtttatggactgtttctcgggtgaacaaacacaagttctgtgc
acactcaaaaatgaatctgagtgccttccagtaaaattcagtttccgcaagactgctcac
tttaatatttctcctgaaaaaggaaaaataaaaaaatgttctacaaaggatgtgatattt
tcattttctccgcatcaaataggaacatttaaagtgaagcaagttgttgatatcattggt
acaggactagaaaaaaataatttacaggtttcgaagacaaaatcttttcaccaaatatac
ctgagcttgattggtgtgtgcaaatctaagccaaaaaacattctattcaaaattaatcct
ggtataacaccaatgatttccaatgcaactggacaatttgtagctgatggcacaggactg
tgcactgatattgcacctgtggcaatacttaaatcaacccaaacacaaatccatactcac
cagataaacagaaattgtaagggtgatgcatttatagcttttcctaatgaccgctcagcc
agcattaggcctagcgaacggaataaaaaatacaggactatttttacgaagactgagaga
tataattacatagatccacagttttcttatactgactatgaacgactgttaaaagaagta
cacaaggaatactatgccaatttcatttcaagtttaaggcagcgtcgcttgcagaaagat
gtcaccaggcagttttatatttataataattctgtgaacataggccttaaacctgcagaa
ggacttgtgtcaccacagatctcaatcacagattttcacaaggaggagttacagttcaaa
atgcttcctttagacgagaattgcctattaactagtcaaagactggcagcaagtgcttct
aaatcttcaatcaaagaaatttggagcgggcttcgtgttatgccatcttctacccaagag
aaggaagattgtagtctaactttgacacccaaacagcttcatcaaatactaattggtcct
tctactatggactttggtgatgtttgtgtgtactctacaactgccagaaaactacatatc
gtcaataacttgttagtccatatatggatacaaattgagattgaaatagatgaactagag
cagacaagtccactgtgtcaggtggtgcctcctcttacaaagacttatattccagtagtc
tttgagacaaacaagcttggaatgtttaaaagatcttttacttacacaataaacaacaaa
catccggggcatgtgctggtcattgcaaatgcagtgtctgttgaacttcagttgtctgaa
agggaactgattttaaatcctattcctggctacctggcagagacagaatttagaacaact
gtcagggtatacaataccagaaaccattctgctgagtttacttggaaacctgtaactaca
gataagggaactgcattttctatacagccagccaaaggctttgtggagccctatagagac
ttagagtgtgaagttgtttggcatccagggttcaactccccagaagcaggagaattcaac
ttgtgtgtgcgtaaaggaaacacaattaagttgaaatgttttgcaaagcttggtaccacg
aaagttcagtttatagaacaaaggataccgttcagtcattgtccaatgggtttatctact
tgtaagacagccattcttcaaaacacaggatacaatcatgcctacttccaagtccttcat
tcaaatccactgcctggaatgttgatcacccctcatgacggggtggtacctgtgggaggc
catgctgagctcaaaatcctttttactccaaatgcaaaaatgagttttgatacaagagtg
gaggtagcagtgcgaaattcgagagtactagtactcaggattgttggatttgtagagacc
cctgaaataaagattgatgtggaactatttgactttggtggtgtttatgttgattctaca
aaatcaattccatttttgcttcagaacaaaggacaggcacgtaccagagtggagtttgat
tttttcaagtataaggattttaaattgagtgctaaagaccattcagtggttgaaagctgt
tcttcagagccctatttgtattcagttgacttagagggaaagtcatctttgcagtgctcg
ttgtccttcatgccaaaagaggtggcagcgtatgacttcactcttccagttaatactcct
tgggatgactttccattgctacagcagtgctctatatctgcaacttctgttgggcctgta
aagcacactactcctccgcagccacagacagtgactgtggctgttccagtctgtagagtt
aaagcagttgtacttaaatcaccactggagttctcctcaatgaaacttacatttacacaa
cattcaagctgtatacgttacaatagtcctgatgaaagtctgaattcccaggagcttgac
ctgaagaatatctcaaggcagtatttaacatggaaattgaattgtgatgatgcaggcaaa
aatatagaagacggtattttcaaatttagtctgcatgctggatttcttgatccaggacaa
aaaatcagtattactgtattcttctgcccttcttgtcctgggacgtatgcatctgaagtg
tcagtgtgtctagatgataatccatcacattacaaaataatcttgtctggtattatgaag
tcaccaaaaataaattttgatcccccctttttaatgctgatgccagttcctctggatgtg
aaaactgaaacagccatcaatattattccacaagattacttaaggtcatcacgaattcaa
gttgaacttcccgagcttgaacttgaagatggtgacaggatttaccctttttctatacag
tttccagaaggacaagatataattctttcatcaaatggcacaaatatggaactaaattgt
catatcagcttcagatcatcaaagccaatttcatctttagggaccatattcttcactgat
gaagaagaaaacagattctcccttcaggttgctgcaacagcagagaattgccttcttact
ttatacccatatttggcatttcacctctctgatcaacaagttactttgataagcaatagt
aaagactacagtagtggagaagttgttctgcatccacgttacactccacaatcacttccc
catagtacttcctcaagttcctttggtgcaatcactgaatcaacctatgaatattcccag
tcaggtatagtatatcttacccttgaaagtgatgaacagacaagtgaagagagtgaagct
gatagtccaagtgatgggagagaaaataaatctgaattatcattttttcctgatgaggac
aaagaagagtacatcttctttcagaaagctctaaccgctgttcagaattggttcactctg
tttggctggcctaagggaccaaatcctatttcaataccatattcactaagacgtgatgtc
tgtaaagaccagaggagttcttctcaagaaaatgtttttaaacaaaaccttggcaaagat
actaagactgtttacgacatgttattccacctgagtggacagttgttacccggcattaca
ttgagccggtcactgccccttgatcctgttgaacaaattttacagctccattggcagcat
tctacgttccttgctttccttaaaagccaaggagcatgtcttcctcatgttatgccagaa
ttcctgcttgaacctgattattataagaagtggattaaagtgcaaactctgttgaaggcc
cacatgactgagttgaaacaaggagatgagaaaaactcagatgtgtttagcaacgaacac
ctattcattctggaggacagcgtatttgagacaattagcaaacgagcttggacagatgtg
ctactgcaagtatacaaggtgtttgttcttcctcgtgtttcttcgcgtaagaccagtgat
ccgttcaatttggaaaatgtgctgaacatgccaagaataaaatcagaacctttatccagt
aacatatattctccatatgagcgaatcatccttacttggttaaataaacattatgaaaag
aatcgaaaaattgtgtggaaagatggtcaaaaaggtgaagtaccaccaatgagatggata
gtgaattttgaccgagatcttctagatggtctggtattggcagcacagctggcagcttat
tgtccatacttgattgctactcactttgtaaggatgtatactaatgcaaaaactcctgca
cagtttctgcacaactgtttgatacttgtgaatgctatgcatgctgtcaatctgactata
gacataaaggccactgacatctgtgatccaaatccagtcatgatgcttattctgtgtgtc
tacctatatgaaagcctccctcactacttacccaagaagactatagaatttacaggtgct
ctccatgcaactgttgttaaacaggtgcgtctgaaaaacccgagcattaaaactttggtg
tataacactattcttgtgggaagagatgctgatgatttctcattacctaaaggaaacact
gtcatcatttcttccaacttgtgtatgtgcagagaaaggtctagaggaatatctaagatg
cctaaggatgtaaatctcacatagatacagaacaaattaaaacttttggaactgattgcc
ctgaaaataaatctggacttctttcagcatatgaatacttttggaaattctgttgcagag
atggatatattaaaatgcaaatccccatgttatgagctgaagaaaattgtcctaaatgtt
actaatcccttcagaactgatggcatattcagggtcattttgctggaatccacaagttgc
ttaactcagccagaacatatatatcaagccaggcaagtaaagcaagagcaaacattcagt
tctgaaaataatgtaataaattgtaaaaacagtgcactgcctaatgagccaaatgaagag
aacaactttaattgctctgaccagtccagcctcctgcatgagttcttcagtccaatggaa
aaactattcttgacagcgagaagttctgcaggcttagagattcactttcttccctttaat
ctggaaaaacgttactgcactgtcattctggttaatgaactgattggagaatttgtatac
ctggtagaaggaacaggtgatatacctttaccttcaggactgcttccaatggatagtcca
aatgttttgcatattagcagcacattagaaggtccaagtgcagcagagccggttttatat
ttgaaatgcagtcttgagcagactcttgaagaaaatctcaggattccattgatcaatgaa
tcaagagaaagggctctggctattgctgcacaacagcaaatgtcaaatattgaatatgaa
agaagaaagatcacagagactctggatagcagtagcatccgagttgcaactgcattgcta
gggctgtccagaatagagagatgtgaactcctaaaacctcataaattcccaccagagttg
aagtatgtggattacagcgtacaagtgagcatgcaagaattctttgacgttcctgagaaa
ctctctattccagtgttggcatctagcagagttaatttgaaagttctgtcagtaaaagat
gtttcaccagagaaaatagatggaagtgatgcagttgaacttcctataaaattcattcct
cagtatgctggttgctactgctgtgagattctcttgaagtcctcccaggatattcgtgtc
tatgtgattaaatgtgtagtgaatacaaaccacgctgaagcagagattgaatttctaact
ccagcttaccaggcagtgatacaggatattccaataaataacatgtccagccaggactgg
aaatttgaagcagttttggaaggacagggctttcacggccctcctctaataaatgtgggc
ataggtgaaacagctctgtatcctctcacgttcaagccagttgctgagtgcttatcaatg
ggaagacttattctgcgaaatgttatggctggcactgaaagcatctttatccttaaggga
atagggaagaaacctctggcgcaggatcatattgtgatagattgccaagtgagacaggtt
actcgaaaagtattatgggtgcccaattataccaagaaaaagttaacgtacaaggtatct
tcagatctttcaatggtgggtggtgcaccaattcttactgtggaaccagatgacacggtc
gcttacactttgagtgtatctccatggagacgaggaatctttcaaggtgtaatttcattt
gttgctgaagatgcagaccaacagcagtctcagcataacagctcaccagagaagacagat
ggtgaacaggcccttcagaaattgtcaacagagacaccacaaactgttgatagagcaaac
acaggaggaagttcttcaaattgcaaagtgtggttttccttaaagattaacagcacacct
gcagcacctgagagaatgatagatgtaaaatgcagagctctgaatactgttggaattcat
attcctatcatgaatcctacagatgaaattctccatctgagtgtggtgttggagaatcag
tcactttctgggcaaaaatctttcactctttcacctaaacaaacatttttttatcaacta
aagttttctccagctgtcgttggcacttcagatgaaagtgtcatattcctgtcagacatg
gttggagagttttggtatgcactgaagctgactgtagagaaaccattgccaactaatctg
cctgaaatagaatgtgagcttggaaaatgggttcgtctacacatacctctcgttaatcct
acacgtgaaactttggaattagaaattgctaacagcaatcctagcaatttttcaactgag
actgatccaaaacatcctctgattgttgctcctcattccaccactgaagtacccgtgcaa
ttctgtccatctacccttggaagaggaaatcacaaggcatcaataaccttcaaatgttca
cagcttatagaatggatattttacctgttggggactggtcttcctcctcagttgatggaa
ccaactagcataagtgcgtgcattttccagggttcttctgtcatcatatccttcaaaaat
ccaacttctgaaaatgttctggtagatgtcatgctaacaggtcaggaacagtccagttgt
cacctcaatgcatctgtcctaaccaagttccccactaaggaatctgctttccatcttctg
ctcaaacagacacgaggaattcaattagctccaaaagaaaaactggacatcccagtgtta
ttcatgccagatacaatgaaaatgtatgaggctgcggtggtaattcatgtaatgagggaa
aatggtgaaaactggccttatgaggattctgctgaattaagtaaagacttaaagagtttt
actgtgtcagaggatgggggtattcagggaatactctggacctatccagttcatggaata
cctgaaggaccacagcagaaattagtgccagctgttgtacgttgtcaagccaggcagaga
gtagaaaaaagagtagaagtgctgctaactggtgcagttcctggtgcaactgctatgcct
gccacaagaaattctgcattgatcaatagacataagccagccaatatccaagaagaagtt
caagtcactgatggtttctctacaacagtggaatttctgtatgaattacaatatcagtca
aatgaaattaaatctcagcttgaatctttagttggtatgcatctgattcaaagagaacgg
gatccagaatctggaattataacgctgatatttaatatagtgtttgcacctaacaaacca
atgaggaatgaaggaactctagtagtacactgcactacaggaggtatttggaagtttcca
gtgctgttcattgctacagagccagaagtggatgatgtcatcaacattgaagcaattggc
ctaaataaggaatctattgttgattttaagcttacaagccagacaaggtaccctgagcca
ttcactgcatacttcctggcgggcagtgatcctgactttcttgtactgccgcaagctgga
gaacttcttccagtgggcactgttggaactcatataacagtgggattcaagccaagaatg
tatggcaagaagcataaagcaacacttgtaattcagactcaatcaatgcagtggacatac
gaaatcaatggcctgcctccacagaccacaccacctacaagaccagcaaaagtagtttct
actagcggttacataagatcagccacagttcgacagcgcaatttcttacgtgaaaatctg
aagcttacaaccactggggtatcctcaccaatcaagggggcacctttagtcctgaggaca
aaatag
DBGET
integrated database retrieval system
