Cygnus atratus (black swan): 118245812
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Entry
118245812 CDS
T09349
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cata04990
]
118245812 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
cata04990
]
Other domain-containing proteins
Patched domain-containing proteins
118245812 (PTCHD1)
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
118245812
NCBI-ProteinID:
XP_035398204
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All DBs
Position
1:complement(124863892..124896069)
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AA seq
888 aa
AA seq
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MLRQVLHRGLGTSFSRLGHFVASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPTH
SLAKIERNLVDSLFPVNRSKHRLYSDLQTPGRYGRVIITSFRKANMLDQHHTDLILKLHS
AVTRIQVQRPGFNYTFAHICILNNDKTCIVDDIVHVLEELKAARSSNRTNFAITYPITHL
KDGREVYNGHQLGGVTVHSKDRVKSAEAIQLTYYLQAINSLNDMVAEKWESIFCDTVELF
QKSNRKVKMYPFTSSSLKEDFQKTSRVSERYLITSLVLVVTLAILCCSMQDCVRSKPWLG
LLGLLTVTLATLTAAGIINLTGGKYNSTFLGIPFVMLGHGLYGTFEMLSSWRKTREDQHV
KERTAAVFADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAIFFNYLYVLSF
YGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKPAWYRFLLTARFSEDTTDSEETNTYES
HLLVWFLKRYYCDWITNTYVKPFVVLFYLVYISFALMGYLQVSEGSDLSNIVATATRTIE
YTTAQQKYFSNYSPVIGFYIYESIEYWNTSVQEDVLEYTKGFVRISWFESYLNYLRKLNI
STGLPKKNFTDMLRNSFLKAPQFAHFSEDIIFSKKYNNEVDVVASRMFLVAKTMETKREE
LYDLLETLRKLSLTSKVKFIVFNPSFVYMDRYASSVGAPLQNSCISALFLLFFSAFLVAD
SLINVWLTLTVASVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDNCAPLLSTFVLGKE
FTRTKWVKNALEVHGVAILQSYLCYIVGLIPLAAVPSNLTRTLFRCLFLIALVTFFHCFA
ILPVILTFLPPSKKKRKEKKNPENRDEIECVEMVDMDSTRVVDQITTV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggcaggtcttgcacagggggctggggacgtccttctcccggctcggccacttc
gtcgccagccacccggtgttcttcgcctcggcgcccgtgctcatctccatcctgctgggc
gccagcttcagccgctaccaggtggaggagagcgtggagcacctcctggcccccacgcac
agcctggccaagatcgagaggaacctggtggacagcctcttcccggtgaaccgctccaag
caccggctctactccgacctgcagacgccggggaggtacggcagggtgatcatcacctcc
ttccgcaaggccaacatgctggaccagcaccacaccgatctcatcctcaagttgcactct
gctgtgaccaggatccaagtgcaaagacctggtttcaattacacgtttgcccatatatgt
atcctgaacaatgacaagacatgcatagtggacgacatagtgcatgtgctggaggaatta
aaggctgctcgttcttctaatcgaactaattttgcaatcacttatccgattactcactta
aaggatggcagggaagtgtataacgggcatcagcttggtggggttactgtgcacagcaaa
gaccgggtgaagtctgcagaagccattcagctcacctactacttgcaggcaatcaactcc
ttgaatgacatggtggcagaaaagtgggaatccattttttgtgacactgttgaacttttc
cagaaatccaacaggaaagtcaaaatgtaccctttcacttcttcttcgctgaaggaggat
ttccagaagacgagcagggtgtcagaacgctacctgatcacaagcttggtccttgtggtc
accttggccattctctgctgctccatgcaggattgtgtccgcagcaaaccctggcttggc
ctgctgggattgctgaccgtgacccttgccaccctgactgcagctgggatcatcaatctc
actggtgggaaatacaattccaccttcctggggatccccttcgtcatgttaggtcatggg
ttatatgggacatttgaaatgttgtcctcctggagaaaaactagagaagaccaacatgtt
aaagagaggactgcagccgtatttgcagattccatgctctcgttttctctcaccactgcc
atgtacctggtcacttttggaataggtgccagtcccttcactaacattgaagcagccagg
attttctgctgcaattcttgtattgcaattttcttcaactacctctatgtactctccttt
tatggttccagcttggtgtttactggctacatagaaaacaactaccagcatagtatcttc
tgtagaaaggtaccaaagccagaggtattgcaagagaagcctgcatggtataggtttctt
ctgacagccagattcagcgaggacacgacagattcagaggaaacgaacacctacgagagt
catcttttggtgtggttccttaaacgttattattgtgactggataacaaacacttatgtc
aagccttttgtagttctcttttaccttgtttatatttcctttgccttaatgggctacctg
caggtcagtgaagggtcagacctgagcaacatcgtagcgaccgccacacggaccattgag
tatactactgcccagcagaagtatttcagtaactacagcccggtgattgggttctacatc
tatgagtcgatagagtactggaacaccagtgtccaggaggacgtgctggagtataccaag
ggctttgtgaggatatcttggtttgagagctacttaaattaccttaggaaactcaacata
tctaccggcttgcccaagaaaaatttcactgatatgttgaggaactccttcttgaaggcc
cctcagtttgcccatttttcagaggatatcatcttttccaagaaatacaataacgaagtt
gatgttgtggcctccaggatgttcttggtggccaagacaatggaaaccaagagggaagaa
ctttacgacctcctggagaccctgaggaagctctctctcacctccaaggtgaaattcatc
gttttcaatccatcatttgtgtacatggaccgttatgcctcttcagtgggagccccctta
caaaactcctgcattagtgctttatttctgctcttcttctctgcattcctggtggcagac
tctctgatcaatgtctggctcactctaactgttgcctcggttgagtttggagttataggt
tttatgaccttgtggaaagtggaactagattgtatttctgtgttgtgcttaatttacgga
attaattacacaattgacaactgtgctccactgttatcaacctttgtcctgggcaaagag
ttcacaagaactaaatgggtgaaaaatgccctggaagtgcatggggtagctattttgcag
agctacctctgctatattgttggtctgattcctcttgcagctgtgccttcaaatctgacc
cgtacactgttcaggtgcttgtttttaatagcattagtcaccttctttcactgctttgcc
attttacctgtgatattgactttcctgccaccgtccaagaagaagaggaaagagaagaag
aatcctgaaaaccgtgacgaaatagagtgtgtcgaaatggtggatatggatagcacccga
gtggttgaccaaattacaacagtctaa
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