KEGG   Cygnus atratus (black swan): 118245826
Entry
118245826         CDS       T09349                                 
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
cata  Cygnus atratus (black swan)
Pathway
cata04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cata00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    118245826 (PDLIM1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cata04990]
    118245826 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:cata04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   118245826 (PDLIM1)
SSDB
Motif
Pfam: DUF4749 PDZ LIM PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 118245826
NCBI-ProteinID: XP_035398234
LinkDB
Position
7:complement(21155916..21195994)
AA seq 327 aa
MGTLRIVLQGPGPWGFRLVGGRDFEQPLTISRVTPGSKAATANLCIGDQIIAIDGVNTDN
MTHLEAQNKIKGCADELTLTVSRTESKVWSPLVNEEGKTHPYKMNLASQPQEIRHIGSAH
NRSAVPFTAATASAPKVITAQYNSPAGLYSSENIQTFNSAVESKTSLGAPEPSKPLDQHN
QPPGSIVIDRESEVYKMLQENQESHEPPRQSASFLVLQEILESEEKGDPTKPSGFRSVKA
PTTKVASSIGNAQKLPMCDKCGSGIVGVFVKIRDKQRHPECYVCSDCGTNLKQKGHFFVE
DQIYCEKHARERVVPPEGYEVVTVFPK
NT seq 984 nt   +upstreamnt  +downstreamnt
atggggacgctccgcatcgtgctgcagggccccgggccctggggtttccgcctggtgggc
ggccgggacttcgagcagcccctcaccatctctcgggtgactccaggtagcaaagctgca
acagccaacctgtgtataggcgaccagatcatagccattgatggagtgaacacagataac
atgacgcacctcgaggcacagaacaaaatcaagggctgtgcagatgagctaaccctgaca
gtcagcagaacggaatcaaaagtctggtcaccgcttgtaaacgaagaggggaagacgcat
ccttataagatgaatctggcctcccagccccaggaaataaggcacataggaagcgcacac
aaccggagcgcggtccccttcactgctgccacggcttctgcccccaaagtgatcactgct
cagtacaacagcccggcgggcctctactcctcagaaaacatccagaccttcaacagtgcc
gtggagtcaaagacatcactcggggcccctgagcctagcaagcccttagatcagcacaac
cagcccccgggcagcattgtcatagacagagaatctgaggtttacaagatgctccaagag
aaccaagagtcgcatgagccacccaggcaatcagcttccttcctggtgctgcaagagatt
ttggagtcagaagagaaaggagaccccaccaaaccatctggatttaggagcgtcaaggcc
cccaccacaaaggtggcctcatcgattgggaatgcccagaagctgcccatgtgcgacaag
tgtggatctggcattgtaggcgtgtttgtgaagatccgggacaagcagcgtcaccccgag
tgctacgtgtgcagcgactgtggcaccaacctcaagcagaaaggacacttcttcgtggaa
gaccaaatctactgcgagaagcatgcgcgggagcgggtggtccccccggagggctacgag
gtggtcactgtcttcccaaagtaa

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