Cygnus atratus (black swan): 118245826
Help
Entry
118245826 CDS
T09349
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118245826 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cata04990
]
118245826 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
cata04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
118245826 (PDLIM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
118245826
NCBI-ProteinID:
XP_035398234
LinkDB
All DBs
Position
7:complement(21155916..21195994)
Genome browser
AA seq
327 aa
AA seq
DB search
MGTLRIVLQGPGPWGFRLVGGRDFEQPLTISRVTPGSKAATANLCIGDQIIAIDGVNTDN
MTHLEAQNKIKGCADELTLTVSRTESKVWSPLVNEEGKTHPYKMNLASQPQEIRHIGSAH
NRSAVPFTAATASAPKVITAQYNSPAGLYSSENIQTFNSAVESKTSLGAPEPSKPLDQHN
QPPGSIVIDRESEVYKMLQENQESHEPPRQSASFLVLQEILESEEKGDPTKPSGFRSVKA
PTTKVASSIGNAQKLPMCDKCGSGIVGVFVKIRDKQRHPECYVCSDCGTNLKQKGHFFVE
DQIYCEKHARERVVPPEGYEVVTVFPK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggggacgctccgcatcgtgctgcagggccccgggccctggggtttccgcctggtgggc
ggccgggacttcgagcagcccctcaccatctctcgggtgactccaggtagcaaagctgca
acagccaacctgtgtataggcgaccagatcatagccattgatggagtgaacacagataac
atgacgcacctcgaggcacagaacaaaatcaagggctgtgcagatgagctaaccctgaca
gtcagcagaacggaatcaaaagtctggtcaccgcttgtaaacgaagaggggaagacgcat
ccttataagatgaatctggcctcccagccccaggaaataaggcacataggaagcgcacac
aaccggagcgcggtccccttcactgctgccacggcttctgcccccaaagtgatcactgct
cagtacaacagcccggcgggcctctactcctcagaaaacatccagaccttcaacagtgcc
gtggagtcaaagacatcactcggggcccctgagcctagcaagcccttagatcagcacaac
cagcccccgggcagcattgtcatagacagagaatctgaggtttacaagatgctccaagag
aaccaagagtcgcatgagccacccaggcaatcagcttccttcctggtgctgcaagagatt
ttggagtcagaagagaaaggagaccccaccaaaccatctggatttaggagcgtcaaggcc
cccaccacaaaggtggcctcatcgattgggaatgcccagaagctgcccatgtgcgacaag
tgtggatctggcattgtaggcgtgtttgtgaagatccgggacaagcagcgtcaccccgag
tgctacgtgtgcagcgactgtggcaccaacctcaagcagaaaggacacttcttcgtggaa
gaccaaatctactgcgagaagcatgcgcgggagcgggtggtccccccggagggctacgag
gtggtcactgtcttcccaaagtaa
DBGET
integrated database retrieval system