Cygnus atratus (black swan): 118245836
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Entry
118245836 CDS
T09349
Symbol
USP9X
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cata01002
]
118245836 (USP9X)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118245836 (USP9X)
Enzymes [BR:
cata01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118245836 (USP9X)
Peptidases and inhibitors [BR:
cata01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118245836 (USP9X)
Ubiquitin system [BR:
cata04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118245836 (USP9X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
118245836
NCBI-ProteinID:
XP_035398254
LinkDB
All DBs
Position
1:complement(118227103..118327576)
Genome browser
AA seq
2552 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQAPDGQSQPPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQL
EDEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNP
HCKFHLYNGTRPSETVPAGVQLAEDELYARPPDPRSPKGWLVDLINKFGTLNGFQILHDR
FMSGSALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDDELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VITSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNMSQTQRSPHVFYRH
DLINQLQHNHALVTLVAENLSAYMESMRQYAKEHGEYDPQTVRPGSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFF
ENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWRVVIQ
GNDDIANRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAIRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHITLVVRFPNQGRQVE
DLDIWSHTNDTIGQVRRCILNRIKANSAHTKVELFIGGELVDPADDRKLIGQLNLKDKTL
ITAKLTQINSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIMSLHPRYISF
LWQVADLGSSLNMPPLRDGARVLMKLMPPDNTTVEKLRAICLDHAKLGESSLSPSLDSLF
FGPSASQVLYLTEVVYALLMPASAPLGEDASDFQYNFLKSGGLPLVLSMLTRNNFLPNAD
METRRGAYLNALKIAKLLLTAIGYGHVRAVAEACQPVVEGTSTVSPVNQATHDQAVVLQN
ALQNIPNPTSECMLRNVAIRLAQQISDEASKYIPDICVIRAVQKIVWASGCGSVQLVFSS
NEEISKIYEKTNAGNEPDMEDEQVCCEALEVMTLCFALIPTALDALSKEKAWQTFIIDLL
LHCHSKTVRQMAQEQFFLMATRCCMGQRPLLFFITLLFTVLGSTARERAKHSGDYFTLLR
HLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDEVKRTGETGVEETILEGHLGVTKELLAF
QTPEKKYHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIPVCSSPATINA
GFELLVALAVGCVRNLKQIVDTLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKGFVGLK
NAGATCYMNSVIQQLYMIPAIRNGILAIEGTGSDVDDDMSGDEKQDNESNVDPRDDVFGY
PHQYEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNL
REQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTL
NVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRF
DYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQIIQNEQSENEHSGST
KYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECKMDDDEEMKNQCF
GGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTIDKDNELIKYISELAITTKPHQI
KMPSAIERSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNPPPGQDHLLPEAEEIT
MISIQLAARFLFTTGFHTKKIVRGPASDWYDALCILLRHSKNVRFWFAHNVLFNVSNRFS
EYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPFASPGPSSQAYDNLSLSDHLLRAVL
NLLRREVSEHGRHLQQYFNLFVMYANLGVAEKTQLLKLNVPATFMLVALDEGPGPPIKYQ
YAELGKLYTVVSQLIRCCNVSSRMQSSINGNPPLANPYGDPNLSQPIMALQQNVADILFV
RTSYVKKIIEDCSNSEETIKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLL
QILLIEDSWQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSNCPVA
YQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPIQSNETSNGYFLERSH
SARMTLAKACELCPEEEPDDPDAPDEHESSPPEDAPLYPHSPGSQYQQNNHVHGQPYTGP
AAHHMNNPQRTGQRAQENFEGSEEVSPPQTKD
NT seq
7659 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgactcgtggctctccggtaggaggcaatgatagccagggccaggctcct
gatggacagtcccagcctcccctccagcagaatcagacatcttcacctgattcttccaat
gagaactccccagctaccccgcctgatgagcagggacaaggagatgctccaccccagctt
gaagatgaggagcctgcatttccacacacagacctggcaaagttggatgacatgatcaac
aggcctcgatgggttgttcctgtattgccgaaaggggaattagaagttcttctagaagct
gctattgacctgagtaaaaaaggccttgatgtcaaaagtgaagcatgccagcgatttttt
cgagatgggttaacaatatctttcacaaaaatccttactgatgaggcagtgagtggctgg
aagtttgaaatccatagatgtattattaacaacactcatcgactagttgaactctgcgtg
gccaagctgtcccaggactggtttccccttcttgaacttcttgccatggccttaaatcct
cactgcaaattccatctatacaatggtacacgtccctctgaaacagttcctgcaggagta
cagcttgctgaagatgaactttatgcccgtcctcctgacccacgatcaccaaagggttgg
ctagtagatcttatcaacaagtttggcacattaaatggatttcagatcttgcatgatcgc
ttcatgagtggatcagcattgaatgttcagataattgcagctctcattaagccatttgga
caatgttatgaatttctaacattacatacagtgaagaaatatttccttccaattatagaa
atggttccacaatttttagaaaatttaacagatgatgaactgaaaaaagaagcaaagaat
gaagccaaaaacgatgctctgtcaatgataatcaaatctctaaagaacttagcttcaaga
gttccaggacaagaagaaactgtaaaaaacttagaaatatttaggttaaaaatgatactt
aggttgttacaaatttcttctttcaatggtaaaatgaacgcactaaatgaagttaacaaa
gtaataaccagtgtgtcatattatacccatcggcatggtaatcctgaagaggaagaatgg
cttacagctgaaagaatggcagaatggatccagcagaataatattttatcaattgtgttg
agagatagtcttcatcaacctcagtatgtagagaaattagagaagattcttcgttttgtc
atcaaagagaaagccctcactttgcaggatcttgacaacatttgggctgcacaggcagga
aaacacgaagccattgtaaagaatgtacatgacctccttgcaaaattagcttgggatttc
tctcctgaacagcttgatcatctgttcgattgttttaaggcaagttggacaaatgcaagc
aagaaacaacgtgagaagctacttgagttaatccgtcgtcttgcagaggatgacaaggat
ggtgtgatggcacacaaagtgctgaaccttttatggaatttggctcatagtgatgatgta
ccagttgatatcatggaccaggctcttagtgctcatattaaaatcttagattacagctgt
tcacaggatcgagatacacaaaaaatccagtggatagatcgttttatagaagagcttcgc
acaaatgacaaatgggtcattcctgcactgaaacaaattagagaaatttgcagtttgttt
ggtgaagcaccacagaatatgagtcaaactcaacgaagtccccatgtgttttaccgacat
gacttaatcaatcaacttcagcacaatcatgccctagttacattggttgcagaaaatctc
tctgcctatatggaaagcatgaggcagtatgctaaagagcatggtgagtatgatccacaa
actgtaagaccaggaagcagatacagtcatgtgcaagaagtacaagagcgacttaatttc
ttacgatttttattgaaggatggtcagctgtggctgtgtgcccctcaggcgaagcaaata
tggaagtgtttagctgaaaatgcggtttatctttgtgatcgcgaagcctgttttaaatgg
tattccaaactaatgggggatgaaccagacttagaccctgacattaataaggacttcttt
gaaaataatgtgcttcagctggatccttccctattaacagaaaatggaatgaaatgtttt
gaacgtttcttcaaagctgtgaactgtcgagaagggaagctagtagcaaagagacgagcc
tatatgatggatgatctggaattaataggattagactacctttggagggttgtgattcag
ggaaatgatgacatcgcaaacagagcaatagatcttcttaaagagatctatactaatctt
ggcccaaggttacaagttaatcaggtagtgattcatgaagacttcattcagtcctgtttt
gatcgtctcaaagcctcctatgatacattatgtgtgttggatggagataaagacagtatt
aattgtgcaagacaagaagcaatacgaatggtcagagtgttgactgttttaagagagtat
ataaatgaatgtgacagtgattaccatgaagagagaactatcctacctatgtcaagagct
ttccgtggtaaacatatcacactggtagttcgttttccaaatcaaggccgacaggtagaa
gatttggatatttggtctcacacaaatgacacaattggccaagtacgacgttgtattctc
aatcgtattaaagccaacagtgcacacacaaaagtagaactgttcattggtggtgagcta
gtggatcctgcagatgatagaaaattaattggccaattgaatctcaaagataaaacgcta
attacagctaagctcacacagataaattctaatatgccttcaagtcctgatagttcttct
gactcttcaactggttctccgggcaaccatggcaatcactacagtgatggtccaaaccca
gaggttgaaagctgtttgcctggagtgatcatgtcactgcatcctcgatacatttctttc
ctttggcaagttgcagacttgggcagtagcctaaatatgccacctcttagagatggagca
cgtgttcttatgaagctcatgccaccagataacactacggttgagaaactaagagctatt
tgtttagatcatgcaaaacttggggaaagcagccttagtccatcccttgactctctattc
tttggtccttctgcctcacaagtgctatatctaacagaggtagtttatgccttgttaatg
cctgccagtgcccctctgggagaagatgccagtgacttccaatacaacttcttaaaaagt
ggtggtttacctcttgtattgagcatgctgactagaaataacttcctgccaaatgcagat
atggaaactcggaggggtgcttaccttaatgctctaaaaatagccaagttactgctaaca
gcaattggatatggccatgttcgagctgtggcagaagcttgtcagccggttgtggaaggc
acaagtacagtttcaccggtaaaccaggctacgcatgaccaggcagtggtgctacaaaat
gccctacaaaacattcctaacccaacttcagaatgcatgctaagaaatgtagcaatacgt
cttgcacagcaaatatctgatgaggcttcaaaatacatacctgatatctgcgttattaga
gcagtacaaaaaattgtctgggcgtcaggttgtgggtcagttcagctggtgttcagctct
aatgaggaaatcagtaaaatttatgaaaagacaaatgcaggaaacgaaccagacatggaa
gatgaacaagtttgctgtgaagcattggaggtgatgaccctgtgttttgctttgattcca
acagcactggatgcactcagtaaagaaaaggcatggcagacgtttatcattgatttacta
ttgcactgtcacagcaaaactgttcgtcagatggcacaggagcaattctttttaatggct
accaggtgttgcatgggacagagacctctccttttcttcattaccctgctgtttactgtt
ctagggagtactgcaagagaaagagctaagcattctggagactacttcactctcttaaga
catcttctgaactatgcttacaacagtaatattaatgtacctaatgctgaagttcttctc
aataacgaaattgactggctgaaaaggattagggatgaagtaaaaagaacaggggaaaca
ggtgtcgaagaaactatcttagagggtcaccttggagtaacaaaagagttgctagcattc
cagacacctgagaagaaataccatattggttgtgaaaaaggaggtgctaatctcattaaa
gagttgatagatgatttcatctttccagcatccaatgtttatttacaatacatgagaaat
ggagaattgcctgctgagcaggccataccagtctgtagttcaccagctactatcaatgct
ggctttgagctactagttgcactagcagttggatgtgtccgaaatctcaaacagatagta
gacaccttgactgaaatgtattacataggtacagcaatcactacttgtgaagcgcttaca
gaatgggaatatctaccacctgtagggcctcgaccgccaaagggatttgtaggattaaaa
aacgctggtgccacttgttacatgaattctgtcattcagcagctgtacatgattccagcc
atcagaaatgggattcttgcaattgagggcacgggcagtgatgtagacgatgatatgtct
ggggatgaaaagcaggacaatgagagcaatgttgatccacgagatgacgtgtttggctat
ccacatcagtatgaagacaaaccagcactgagtaaaacagaagatagaaaagagtataat
attggagttctgaggcatctccaagtaatttttggtcacttagcagcatccaggctacag
tactatgtaccaagagggttttggaaacaatttagactttggggtgaacctgtaaatctg
cgtgaacaacatgatgctttagaattttttaattccttggtggacagtttagatgaagct
ttaaaagctttgggccatccagcaatgttaagtaaagttttaggagggtccttcgccgat
cagaagatttgtcaaggatgcccacatcggtatgaatgtgaggaatccttcacaactctg
aatgtagatataagaaatcaccaaaaccttcttgattctttggaacagtatgtcaaagga
gatttattggaaggtgcaaatgcatatcattgtgaaaaatgcaacaaaaaggttgataca
gtcaaacgcttgttgattaagaagttgcctcctgttcttgcgatccagttgaaacgattt
gattatgactgggaaagggaatgtgcaatcaagttcaatgactattttgaatttccaaga
gagctggacatggaaccttacacagtggcaggtgtagctaaattggaaggggatgatgta
aatcctgaaaatcaaataatacaaaatgaacagtcggaaaatgaacactctgggagcaca
aaatacaggcttgttggtgtacttgtacacagtggccaggccagtggtggacattattac
tcttacattatccagaggaatggtggagatggtgagaaaaatcggtggtacaaatttgat
gatggagatgtgacagagtgtaaaatggatgatgatgaagaaatgaaaaatcagtgtttt
ggtggagaatacatgggagaagtatttgatcacatgatgaagcgtatgtcctaccgacgc
cagaagaggtggtggaatgcttatatccttttttatgaacgtatggacacgatagacaaa
gacaatgaactaataaaatacatttcggaacttgctatcaccactaaaccccatcagatt
aaaatgccatcagccattgaaagaagtgtccggaagcagaacgtgcagttcatgcataat
cgtatgcagtacagcctagaatatttccagttcataaagaagttgctcacttgtaatagt
gtctacttaaatcctcctccaggacaagatcatctgttgcctgaagcagaagaaataact
atgattagtattcagcttgctgctagatttctcttcaccacaggatttcatacaaagaaa
atagtccgtggccctgctagtgattggtatgatgcattatgcatccttcttcgtcacagc
aagaatgtacgcttttggtttgcacacaatgtcctttttaatgtttcaaaccgcttctct
gagtatcttttggaatgccctagtgctgaagttaggggtgcatttgcaaaacttatagta
tttattgcacatttttcattgcaagatggaccatgtccttcaccttttgcctctcctgga
ccttccagtcaggcttatgataacttaagtttaagtgatcacttactgagagcggtacta
aatcttcttagaagggaagtatctgaacatggacgccatttgcagcagtatttcaatctg
tttgtgatgtatgccaatctaggtgtagcagagaagacacaacttctgaaactaaatgtt
cctgcaaccttcatgcttgtggctctggacgaaggtccaggccctccaattaaataccag
tatgctgaactggggaagctatacactgttgtgtcacaactgatccgttgttgcaatgtg
tcatcacggatgcagtcttctatcaatggtaatcctccacttgccaacccttacggtgat
cctaatttatctcaacctataatggcacttcagcagaacgtagcagacattttgtttgtg
agaaccagttatgtgaagaaaattattgaagattgcagcaattctgaagagaccatcaag
ttgcttcgtttctgctgttgggagaatcctcagttctcttccactgtcctcagtgaactt
ctctggcaggttgcgtattcatacacatatgagcttcgaccttacttggatctgcttctg
caaatcctattaattgaggattcttggcaaactcacaggattcacaatgcacttaagggt
atcccagatgatagggatggactatttgacaccattcagcgctctaagaaccattatcag
aaaagagcttaccagtgtataaagtgcatggtagccctcttcagcaactgtcctgtagcc
taccagattcttcagagcaatggagatttgaagagaaagtggacctgggcagtagaatgg
cttggagatgagcttgagcgtagaccatacactggcaatccccaatacacctataataat
tggtctccaccaatacaaagcaatgaaacatcgaacggctacttcctagagagatcacac
agtgctagaatgactcttgcaaaagcttgtgaactctgcccagaggaggaaccagacgat
cctgatgccccagatgaacatgagtcttctccacctgaagatgccccattgtatccccat
tcacctggttcccagtatcaacagaataaccatgtgcatggacagccatatacaggcccg
gcagcacatcatatgaacaaccctcagcgaactggccaacgagcacaagaaaattttgaa
ggcagtgaagaagtttccccgcctcagacaaaagattag
DBGET
integrated database retrieval system
