Cygnus atratus (black swan): 118245849
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Entry
118245849 CDS
T09349
Symbol
ATM
Name
(RefSeq) serine-protein kinase ATM isoform X1
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03440
Homologous recombination
cata04068
FoxO signaling pathway
cata04110
Cell cycle
cata04115
p53 signaling pathway
cata04210
Apoptosis
cata04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118245849 (ATM)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
118245849 (ATM)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118245849 (ATM)
04210 Apoptosis
118245849 (ATM)
04115 p53 signaling pathway
118245849 (ATM)
04218 Cellular senescence
118245849 (ATM)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cata01001
]
118245849 (ATM)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cata03032
]
118245849 (ATM)
03036 Chromosome and associated proteins [BR:
cata03036
]
118245849 (ATM)
03400 DNA repair and recombination proteins [BR:
cata03400
]
118245849 (ATM)
Enzymes [BR:
cata01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
118245849 (ATM)
Protein kinases [BR:
cata01001
]
Serine/threonine kinases: Other
PIKK family [OT]
118245849 (ATM)
DNA replication proteins [BR:
cata03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
118245849 (ATM)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
118245849 (ATM)
DNA repair and recombination proteins [BR:
cata03400
]
Eukaryotic type
Check point factors
Other check point factors
118245849 (ATM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI3_PI4_kinase
FAT
TAN
FATC
M-HEAT_ATR
HEAT_ATR
HEAT
LRAT
TTI1
Motif
Other DBs
NCBI-GeneID:
118245849
NCBI-ProteinID:
XP_035398267
LinkDB
All DBs
Position
1:complement(191727591..191805426)
Genome browser
AA seq
3064 aa
AA seq
DB search
MSFALHDLLMCCRRLENERATERRNEIENFKRLLRDPGTVLRLDQNSDSGHGNQLNWDAV
FSVLKKYFQKEMENLRLTKPNASASTQSSRQKRMQEIGSLVKYFIRRANRRGPRLECQEL
LNYVLQIIKDPTSCAAYGSDCSSILLKDILSVRKYWCEIHQQQWPDLLMLYGQFYLTPSG
KMNRVLVARIIHTLVRGYCFQTDELKCDVFNFFSRAMQCARQDRNIAGLDHIIAAMNIFF
NTFAVNCRKRICKIGEEILPTVLYIWTQYRPKDSLKESIIELFRLQVHMHHPKGAKSQEK
GAYDSKKWQNILHNLYDLLVNEINLIGSRGKYSSGSRTIAVKENLIGLMADICHQVFTED
TKVLEITQSYTVSQSSDETVPSKRRRIELDWEVIRENLQRSQKDFDVIPWLQITTRLLSK
YPMSLPNCELPPLLNILHQLLPQQRRGERTPYVLKCLKEVALCQNQKTDLKSTYKLELKR
TWAKVWSLTIRSVSFQQIEVESFGLLGAMIQGNLVVTDKELWKIFSGPPLKPSSSAVCCL
ALLMSAYSVPENLDIGMDQSNCERNLVSVLKEAIMKWVLSCCLEEEMEECLKLPPVLCSD
FPHLMIQKILVSLTMKNSKAAMIFFQNDAKCVQHFQGKEESDFSDVEELYLQTTFDEMDI
FTNFAVNVADKNVTGSRLAINQNLRETLEYCLSTMSEKLLSSYAPESRLVAAEHLVRCVS
LSIGVLGCYCYTGLFTEEDACKSELFQKAKSLIHYAGESISNSRKKLNEDAQINSLRTLI
MQCTKCLCNCTKNSANKMLSNLFLRLLTSKFMNDLVDICKNLMTFTGKPSDLGEGDVVGH
DPEESIMEADNQVSDNLFDGHSVTDISGTNESGDMQNVTGAVSPLAEEQLTKQDLLLLEI
LRFLCICATTVQTRTVSFRASDIRRKLLMLTDRSVFDSAKPLHLHMYLVLLKELPTEENL
LPEDEVLMLLRPLSAVCSFYRRDQDVCKVILNNLLPIAVSLGQSSAHAEETGDAQGQFLT
IIGAFWKLSQGKRCTAPVRVALLNCMKALLEADPYSKWAILNVKDGDLPVCDAFPHFLAD
SHHQVCILAAKSITSLFQDVKQKDSSGLSKPLPLKLQQKAFENAYLRVQEGMSNLVSGDA
SSEDLLDKQCNRKAVLLMLVTMVLCCSPVCEKQALFAICQSVKENGLELHLVKKVLKKVS
DIFGYKSIEDFMTSHLDYLVVEWLKINDSGYNLSAFPYILLNYTSLEEFYRSCYKVLVPH
LVIRSQFEDVKSLANKIEKDWRQVLADCFPKILVNILPYFAYQSHGKSEVAEQRDTASKV
YDVLKDEDCLGKQEIDSLSHNNLSEIVVELLMTLHEPLNEEGEGSHLSKYIGELDPSPNP
PHFPSYVIKATLDYISSCHKSKLKSLVAVLTKSPDSFQKILLALCKHASDTNNVYKRHRV
LIIYHFFVSLLLKEIKDGLGGAWAFVLRDVIYTLIHHINSRPVIRDISVRSFSLCCDLLH
HVCHTAVTCCNDALGSHLHVIVGTLTPLAVDQPKIQQQVLGLLKYLVIDNKDNENLYHAI
KRLDPFPEYSAFKDLRSTQQKIKYSKGPYSLLEEMNHFLSVSACDSLPLTRLEGLYDLRK
QLERYKDQMKDLLKIFQEKPEDSVIVKLVVSLLQLSKKAFNHAGEKAVLEAVGSCLGEIG
PMDFSTIALRHAENALDSKAVDLLEDKKLQCVFIMLTQINTALTDNCIDVRAAAVSCLKN
ILATKSGTEFWEVYKKRGDPMLIYLQPFRMSRKKLFELPTNNSEASLETLDDANLWLPLG
ESHETWIKSLTRSILDSGGVQNEVLQLMKPLCEVKTDLCQTLLPYLIHDILLHDSNESWR
NLLSVHVQKFFTACCRFVSSSRSATPPSSDSEQENQVFRSLDKVSRRTMLAVVNYLRRQK
RSVSGTVFDDSFWLDLNYLEVAVAAQSCAAHFTALLYAEIYADKINIDKQQERSSFKKAK
SLTFEEESQRTAITILNEKSKETGISLQDLLMDIYKSIGEPDSLYGCGGGRMLQPLARIR
TYEHEAVWEKALLTYDLEATLSPSTCHAGIIEALQNFGLCHTLSMYLKGLKHENTERCAE
LQEIQYQAAWRNMQWDQISSVIDETGGLGYHKSLYDALQSLRDKEFSVFYDTLKDARVNE
VEELCRGSLESVYSLYPTLCRLQLIGELENIGPVFSRSSTTQQLNDIYLKWQRQSHLLKD
SDFRFQEPIMALRTVILEILLEKEDENTKRECIKDILTKHLVELSKLSRTANNTQLPERA
MFQIKQYNTKQYGVYEWQLEEAQVFWAKKEESLALNILKGLIKKLDADWFQVENNPHLKL
MYTECLRLCGTWLAETCLENPTVIMRKYLEKAVEIAASHSGDNSDEMKNGKMKAFLSLAR
FSDNQYQRIENYMKSSEFENKQALLKKAKEEVGLLREHRVERNRYTVKVQRELDLDECAI
HALTEDRKNFLCKAVENYISCLLSGEEHDMWIFRLCSLWLENSGVDRVNEMMKKNAEKIP
SYKFLPLMYQLAARMGTKMMGGLGFHEVLNNLMSRISLDHPHHSLFIILALANANKDDLL
TKPDSTRRNKLIKTAPKEISQLDVDRMEAASNIINIIRKRRARMVRDIETLCDAYIILAN
VDASPWKSQRKGISIPADQPITKLKNLEDVVVPTMEIKVDPTGRYENLVTIRSFKPEFHL
AGGLNLPKIIDCVGSDGKERRQLVKGRDDLRQDAVMQQVFQMCNTLLQQNTETRKRKLAI
RRYKVVPLSQKSGVLEWCSGTTPLGEFLVNIEEGAHKRYRPKDYSSYQCQKIMMDAQKKH
SEEKYNIFMKVCENFQPVFRYFCMEKFLDPAVWFEKRLAYTRSVATSSIVGYILGLGDRH
VHNILIDEQTAELVHIDLGVAFEQGKILPTPETVPFRLTRDIVDGMGITGVEGVFRRCCE
KTMAVMRNSQEALLTIVEVLLYDPLFDWTMNPLKALYLQQRPEDEADMSSTLGADPQECK
RKASSDDQSFNKVAERVLMRLQEKLKGVEEGTVLSVGGQVNLLIQQAMDPKNLSQLFPGW
KPWV
NT seq
9195 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcgcattgcatgatctacttatgtgctgtcgtcgccttgaaaatgagagagct
acagagcgaaggaatgaaattgaaaatttcaagcgactcctccgtgatcctggaacagtt
ctccggctggaccagaattctgattctggacacggaaaccaactcaactgggatgccgta
tttagtgtcttgaagaaatatttccagaaagaaatggaaaacctcagactgacaaaacca
aatgcatctgcttcaacccaaagttccagacagaagaggatgcaagagattggcagcctg
gtcaaatatttcatcagacgtgctaatagaagaggacccagactggaatgccaggaactt
ctgaattatgtcttgcaaattataaaagatccaacaagttgtgctgcttatggctctgac
tgtagtagtatactcctaaaagatatcctctcagtaaggaagtattggtgtgagatacac
cagcaacagtggccagatctgctgatgctgtatggacaattttaccttacaccttctggg
aagatgaatagagtcttggtggctaggataattcacacactagtgaggggatattgcttc
cagactgatgagttgaaatgtgatgtgtttaacttcttttcaagagcaatgcagtgtgcg
aggcaagacagaaatattgcgggcctggatcatattattgcagcaatgaatatcttcttc
aatacatttgctgttaactgtcgcaaacggatttgtaaaattggagaagaaattttgcct
acagtgctttatatatggactcagtatagaccaaaagattccttgaaggaatcaataatt
gagttatttcgtctccaagttcatatgcatcatccaaagggtgcaaaatctcaggaaaaa
ggtgcatatgactcaaaaaaatggcaaaatatcttacataacctatatgatttgctggtg
aatgaaataaatctcataggcagtagaggaaagtattcttcaggctcaagaactattgct
gtgaaggaaaatttgattggattaatggctgatatttgtcatcaggtatttacagaggat
acaaaagttctggaaattacccagtcgtataccgtttcgcagtccagtgatgaaacagta
ccaagcaagcgcaggaggattgaactagactgggaggtaattcgagaaaacctgcaaaga
tcacagaaggattttgatgtcataccttggttacagattacaactcgattactatcaaag
tatcccatgagtcttcctaactgcgagctacctcccttactcaatatacttcaccagtta
ctgcctcagcagcgacgtggagaaaggaccccttatgtgctgaagtgtcttaaagaggta
gctttgtgtcaaaaccagaaaactgatttgaaaagcacctacaagttagagctcaagaga
acctgggcaaaagtttggtctcttaccattcgtagcgtaagttttcagcaaattgaagtg
gagagctttgggttacttggagctatgattcaaggaaaccttgttgtaacagataaagaa
ctttggaagatattttcaggacctccattgaaaccttcaagttctgcagtatgttgttta
gcattactgatgtctgcctattcagtgccagaaaatttggacataggaatggatcagagt
aattgtgaaagaaatctggtttctgtattaaaggaggcaataatgaaatgggtactgtcc
tgctgtttggaggaagaaatggaagaatgtctgaagttgcctcctgtgctctgcagtgat
tttcctcatcttatgatacaaaaaattcttgtgagccttacaatgaagaacagtaaagct
gctatgatttttttccaaaatgatgctaaatgtgtgcagcacttccaaggaaaagaagaa
agcgatttttctgacgttgaagagctgtatctacagacaacatttgatgaaatggatatt
ttcactaactttgcagtaaacgttgcagataaaaatgtgactggttcaagacttgccatc
aaccaaaatcttagggaaacactggagtactgcctttcaacaatgtcagaaaagctttta
agcagctatgctcctgagtctaggcttgttgctgctgaacatcttgttcgatgtgtcagt
ctctcaattggtgttcttggctgctattgctacactggtttatttacagaagaggatgcc
tgtaaatcagagttgttccagaaagctaagtctctcattcattatgctggagaaagcatt
tctaactcaagaaagaaactaaatgaagatgcccagatcaactcactgaggactttgata
atgcagtgtacaaaatgtttgtgcaattgtaccaagaacagtgctaataagatgctgtcc
aatttattcctgcgtttgttaacatcaaaatttatgaatgatcttgtagatatttgcaaa
aatctgatgacatttactggaaaaccaagtgacttaggagaaggggatgtagtggggcat
gatcctgaggagagtataatggaagcagataaccaggtatctgataatctatttgatggt
cattcagtgactgacatcagtggtacaaatgaatctggtgacatgcaaaatgtaacaggt
gctgttagtccattagctgaagaacagttgacaaagcaggatttactcctccttgaaatt
ttgaggttcttatgtatttgtgcaactacagtccaaactcggacagtgagcttccgagcc
tctgatatacggaggaagctgttaatgttaactgatcggagtgtctttgacagtgctaag
ccattgcatctgcacatgtacttggtccttttgaaggagcttcctactgaagaaaacctc
ttgcctgaagatgaagttcttatgcttcttagacctctttctgctgtgtgttccttttac
cgtcgagatcaagacgtttgtaaagtaattctaaacaatttgctgcctatagcagtaagt
ttgggccagtccagcgcacatgcagaagagacaggagatgctcaagggcaatttttgaca
attattggagccttttggaagctatctcaaggaaagagatgcacggcaccagtaagagta
gcgcttttaaactgcatgaaagccctgctagaggctgatccttattccaagtgggctatc
cttaacgtaaaagatggagatcttcctgtgtgtgatgctttcccacattttctcgcagat
agtcaccatcaagtttgcattcttgctgcaaagtcaattaccagtttgtttcaagacgtg
aaacagaaagattcttctggattgtcaaaacctcttcccttgaagctccagcaaaaggct
tttgagaatgcctatctcagagttcaggaaggaatgagcaatctggttagtggcgatgca
agttctgaagatcttttggataagcagtgtaatagaaaagcagttttgctgatgcttgta
accatggttctgtgctgcagccctgtatgcgaaaagcaagctttgtttgctatttgccag
tctgtgaaagagaatgggttagaacttcaccttgtgaaaaaggttttgaaaaaagtatct
gacatttttggctataaaagtatagaagacttcatgacatcacatttagactatttggtg
gtggagtggctgaaaataaatgacagtggatacaacctgtctgcctttccttacattctt
ctgaactatactagccttgaggaattctacaggtcttgttacaaagttttggttccacac
ctggtcattagaagtcaatttgaagatgtgaaatcactggccaacaagattgaaaaagac
tggaggcaggttttggcagactgttttccaaagatacttgtgaatatcctcccgtatttt
gcctatcaaagccatggaaagagtgaagtagcagagcaaagagatacagcttctaaagtc
tatgacgtgcttaaggatgaagactgcttagggaaacaggaaattgacagtttatctcat
aataatttatcagaaattgtggttgaactgttgatgaccttacatgagccacttaatgag
gagggtgaagggtctcatctgagtaaatacataggggaactggatccttcgcctaatcct
cctcattttccatcttacgtgattaaggcaaccttggactatattagcagctgtcataaa
agcaaattaaaaagtcttgtagccgttcttactaaaagccctgattcattccagaaaatt
cttctagccctttgtaaacatgcatcagatacaaacaacgtctacaagagacacagagtt
cttataatatatcatttcttcgttagtctgttacttaaagagataaaagatggtttagga
ggagcatgggcttttgtcctccgtgatgtaatttataccctgattcaccacatcaacagc
agacctgttatcagagacatatccgtgcgtagcttctcactctgttgtgatcttcttcat
catgtttgccacacagcagttacatgttgcaatgatgctctagggagccacctccatgtt
attgtaggaacactaacacctcttgctgtggaccaacctaagattcagcaacaggtccta
ggcttattgaagtatctggtgatagacaataaggataatgaaaatctgtaccatgcaatc
aaacgcttagatccttttcctgaatattccgcttttaaagatttgcgatcaactcagcag
aagataaaatacagtaaaggaccatattctcttttggaggaaatgaatcactttctctca
gttagtgcttgtgattcactgcccttaacacgacttgaaggactgtatgatttacgcaaa
cagttggaacgatataaagatcagatgaaggatctcctgaaaattttccaggaaaaacca
gaagattctgtaatagtgaaactggtggtgagcttactgcagctgtccaagaaggcattt
aatcatgcaggtgaaaaagcagtgctggaggctgttggaagttgcttgggagaaataggt
cccatggatttctctaccatagctcttcggcatgctgaaaatgcactggattctaaagca
gtggacttacttgaagataaaaagcttcagtgtgtctttataatgttaactcaaataaat
actgctttaacagataattgtattgatgttagagctgctgctgtttcctgtttgaaaaac
atattagccaccaagtctggcactgaattttgggaagtttataaaaaaagaggtgatccc
atgttaatctatctacagcctttcagaatgtctaggaaaaagctttttgaactaccaact
aacaattcagaggcttctttagaaactttggatgacgcaaacctgtggcttcctctggga
gaaagtcatgagacctggatcaagagccttacccgttcaatactggacagtggaggtgta
caaaatgaagttctccagttaatgaagccactgtgtgaggtgaaaacagacttgtgtcaa
actttgcttccatacctgattcatgatatccttcttcatgattcaaatgaatcttggcga
aatcttttgtcagttcatgtccaaaagttttttacagcctgttgcagatttgtctcttca
agtagatcagctacaccaccaagttctgactcagagcaagaaaaccaggttttcagaagt
ctggataaagtatctcgacgaaccatgcttgctgttgttaattacttaagaaggcaaaag
agatctgtttcaggtacagtttttgatgacagtttctggctagatctgaattatcttgag
gttgctgtagcagcacagtcgtgtgctgctcacttcacagccttgctctatgcagaaatc
tacgcagacaagataaatatagacaaacagcaggaaaggtcttcttttaaaaaagctaaa
agtttgacatttgaagaagaaagtcaaagaacagctattactattctgaatgaaaaaagt
aaagaaactggcataagcttacaggatcttctcatggacatatataaaagcattggagag
cctgacagtctctatggctgtggtggaggaagaatgttacagccattagcacggataaga
acatatgagcacgaagcagtatgggaaaaagctcttctaacgtatgaccttgaggcaacc
ctctctccatctacttgccacgcagggataatagaggctttgcagaattttgggctttgc
cacactctttccatgtatctaaaaggactgaaacatgaaaacaccgagcggtgtgcagaa
ctacaggaaatacaataccaggcagcgtggaggaatatgcagtgggaccaaatctcttct
gtcatagatgagacaggaggattggggtaccacaagtcattgtatgatgctcttcagtct
ttacgagataaggaattctctgttttttatgacactcttaaagatgcaagggtgaatgaa
gtggaagagctatgcagaggcagtctcgagtctgtgtattctttatatccaactctttgc
agactacagctaattggagagttggaaaatataggtcctgtattttccagatcttctact
actcaacaactgaatgatatttatttgaaatggcagagacagtcccatcttctcaaggac
agtgacttccgtttccaggaacctatcatggctctgcgcactgtaattttggagatcttg
cttgaaaaggaggatgaaaatactaaaagagaatgtattaaagacatccttaccaagcat
ctagtggagctctctaaattgtcaagaactgctaataatacacagcttccagaaagagct
atgtttcagatcaaacagtataatacaaagcaatatggagtttatgaatggcaactagaa
gaagctcaggttttctgggctaaaaaggaagagagccttgcactgaatattcttaaagga
ctgataaaaaaattagatgctgattggtttcaggtggagaataatcctcatctgaaattg
atgtatacagagtgtctgaggctatgtggaacctggttagcagaaacgtgcttggaaaac
cctacagtcatcatgcggaaatacttagaaaaagctgtggaaattgctgcaagccacagt
ggagacaacagtgatgagatgaagaatggaaagatgaaggctttcctgtctttggctcgt
ttctcagataatcagtaccagcgaattgagaattacatgaaatcctcagagtttgaaaac
aagcaggcattactgaaaaaagccaaggaggaggttggcctcctgagagagcacagagtt
gagagaaacagatatacagtgaaggttcagcgagagcttgatctggatgaatgtgccata
catgccctaactgaggatcgtaaaaatttcttgtgtaaagcagtggagaactatatcagc
tgtttgctaagcggagaagaacacgatatgtggatcttccgactctgttccctgtggctt
gaaaattctggagttgatagagtcaatgaaatgatgaagaaaaatgcagagaaaatccct
tcatacaagtttttgcctctgatgtaccaactggctgctcgaatgggaaccaagatgatg
ggtggtctaggatttcatgaagttctgaataatctgatgtctagaatttcactggatcat
ccacatcattctttgtttataatattggctttggcaaatgctaacaaagatgatctgctg
acaaaaccagattcaactagaagaaataagttaattaaaactgcaccaaaagaaatctcc
cagcttgatgtggacaggatggaggctgctagcaatataatcaatatcataagaaaaagg
agagctcgtatggttagagatattgaaaccctttgtgatgcttacatcatattagcaaat
gtagatgctagtccatggaaatctcaaagaaaaggaataagtattccagctgaccagcca
attactaaactgaaaaacctggaggatgttgttgtccctactatggaaattaaggtggat
cccacaggaagatatgaaaatttggtgacaataaggtcttttaagccagaatttcactta
gcaggaggcctgaatctgcctaaaataatagattgtgtaggatcagatggtaaagaaagg
aggcagctggttaagggacgtgatgatctgagacaagatgctgttatgcaacaggttttc
cagatgtgtaatacattgctccagcaaaacactgaaacacgaaagagaaaattagctatc
cgaagatacaaggtagttcccctttctcagaaaagtggtgttctggagtggtgctcagga
acaactccccttggggagttccttgtgaatatcgaggagggagctcacaagagatacagg
cctaaagattactcaagttaccagtgccagaagataatgatggatgcgcagaagaaacat
tctgaagagaaatacaacatcttcatgaaggtctgtgagaattttcaacctgtgtttcgt
tacttctgcatggaaaaattcctggatccagctgtgtggtttgaaaaacggttggcatac
actcgcagcgtggctacttcttctatagtcggctacatacttggacttggagacagacat
gttcataacatcctgatagatgaacaaactgcagaactagtgcatatagatttgggagtt
gcttttgagcaaggtaaaatccttcccacaccagagactgttccatttagattaaccagg
gatattgtagacggaatgggtattactggagtggaaggagtcttcagaagatgctgtgag
aaaacaatggctgttatgagaaattctcaagaagctttgctgaccattgtagaggtgctg
ctctatgatcccctctttgactggaccatgaaccccttgaaagctttgtatttgcagcag
agaccagaggatgaggctgacatgagctccacactcggcgctgatccacaagaatgtaaa
agaaaagccagcagtgatgaccagagttttaacaaagtggctgaacgcgtcctgatgaga
cttcaggagaagctgaaaggcgttgaggagggaacggtgctcagtgtgggagggcaggtg
aacctcctcatccagcaagccatggaccctaaaaacctgagccaactctttccgggatgg
aaaccctgggtgtga
DBGET
integrated database retrieval system
