Cygnus atratus (black swan): 118245861
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Entry
118245861 CDS
T09349
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
118245861 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118245861 (SPATA13)
Membrane trafficking [BR:
cata04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118245861 (SPATA13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
PH_5
Motif
Other DBs
NCBI-GeneID:
118245861
NCBI-ProteinID:
XP_035398303
LinkDB
All DBs
Position
1:188526086..188573645
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AA seq
1216 aa
AA seq
DB search
MRFFSTPRKRANSSSDRPRSLILMGNSSTWNALSSIRKMGSFKKLKSSVLQGIQARECSD
ILNENSVGKNISNGAVVRVQTNRYSYSGPLQDLQSTVDGLASDCSDAEESDESFLRNTHR
SRSIRRAYGAGRINLLDAEKAQSHHNGTRPTSPVLAEPKICEILVKDSENNRIVYRRSKS
SDNLNFLKKSSFKRKSTSNLTDLKAANEKQMPARTASATSSDSDKTSGNPERRSKRWKSP
IRAKDFDRVLKLVSNVADVAWKKDGSKSTAPSPSEQSQRTRLNSRLHDDYSRRVSSSTDH
DRKRCTSSISSPDSSSPGTPCLQSPAAAQDKEAEMNVAGAEDKNLRTSSGFPESDSLSPT
LSDIGPFPNEVFDTDSDEPKAAQQFTWEAENPHVPVRPTAPKPQSPSVEKVKCNMDFQCP
DHHSTLSLSSMESEERGEVAGLKLGRHPVCFQDAVQTVYYDDGNEDSGISSHSQLSLNLA
PGAEEKKEEVVSDDHWKKSSSQDEEKTDTQKVTPRRWSSGKRSRPRPLSDYGQMSIRSIS
IPEDAVAVESQETDCTDGENKPRLASVGSAIQSNTVGYNRGRKRRPISVIGGVNFYGSGP
AEEIEGLLTQPATRPPVPAHQVPPYKAVSARFRPLTFSQSTPIGLDRVGRRRQMRTSNAA
ADGGTESSALVDDNGSEEDYSYEELCQATPRYLQPGGEQLAINELISDGSIVHAEALWDH
VTMDDQELGFKAGDVIRVLEASNKDWWWGRIEDKEAWFPASFVRLRVNQEELPENCSSIQ
DEEQDADISKHRQKIAENKDQMRTNVIQEIMNTERVYIKHLKDICEGYIRQCRKHTGMFT
TAQLSIIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNH
PSACTELSKLMKQGKYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTT
QEHSDYNNIKAAYEAMKNVACLINERKRRLESIDKIARWQVSIVDWEGPDVLARSSELIH
SGELTKISKQGKSQQRTFFLFDHQLVFCKKDLLRRDILYYKDRIDMDEMELVDTEDGRDK
DFNINVKNAFKIINRATEEIHLFCAKKQEDKKRWMEACGSERRRVQEDKEMGMEISENQK
KQAMQNARKSRHGKMKGVSYNGCPMPPPHQSLHPIHQRHITVPTSIPQQQVFALAEPKRK
PSLFWNTFNKLTPFKK
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttttctccacccctcggaaacgggcgaattccagctccgacaggcctcggtct
ctgattttgatgggcaactcttccacgtggaatgctctgtcttccatcaggaaaatgggg
tctttcaagaagctgaaatcgtccgttctccaagggattcaagcaagggaatgctcagat
atcctaaacgagaacagtgtaggcaagaacatttcaaatggggcagtggtgagagttcag
actaacaggtactcctattcgggacctttacaggatttgcagagcacggttgatggtttg
gcttctgactgctctgatgcggaggagagcgatgagtctttcctgaggaacactcaccgc
tcacgcagcatcaggcgggcttacggcgccggccgcataaacttgctggacgcagagaaa
gcccagagccatcacaacggcacgaggccaacgtctcccgtcctcgcggagccaaagatc
tgtgagattttagtgaaagactctgaaaacaacaggatcgtttatcgaagaagcaaaagt
tcggataatttaaactttctgaagaaaagctcgttcaaacggaagtccacctcaaacctt
accgacctcaaggctgcaaatgaaaaacaaatgccagcaaggactgcgagtgctacttct
tctgactcggacaaaaccagtgggaaccccgagaggagatccaagcggtggaagagcccc
atcagggcaaaggattttgaccgagttttgaagcttgtcagcaacgttgcagatgtcgcg
tggaagaaggatggctctaaaagcacagctccttctcccagcgagcagtcccagagaacg
aggttgaacagcagactgcacgatgactactcccgcagggtttccagtagcactgatcat
gacagaaagagatgcacctcctcgatatctagtccagactcttcctcaccaggaacacct
tgcctgcagagccccgcagctgctcaggataaagaggctgaaatgaatgtagctggtgct
gaagacaaaaacctcaggacatcttcaggtttcccagaatctgatagcttgtcgccgact
ctgagtgacatcgggccgtttcccaatgaagtgtttgatacggactcggatgaaccgaaa
gctgcccagcagtttacatgggaagctgaaaatcctcacgttcctgtcaggccaactgct
ccaaaacctcagagccccagtgtggagaaggtcaagtgcaatatggatttccagtgccca
gaccatcacagcacgctgtcgctgagctcaatggaaagcgaggagaggggcgaggttgcc
gggctgaagctgggcaggcatcctgtctgcttccaggacgccgtgcaaaccgtgtactat
gatgatggaaacgaggacagtggcataagcagccactctcagctgagcctcaatttagcc
cctggtgcagaagaaaaaaaggaagaggttgtttctgatgaccactggaagaagtcctca
tcccaggatgaagaaaagacagacacacagaaggtcacacccaggagatggagctctgga
aaaaggtctcggcccagacctctctcagactatggccaaatgtcaatcagaagtatctct
atacctgaagatgcagttgctgtggagtcacaggagacagactgcacggatggagaaaat
aagccacgactggcttctgttgggtctgcgatccaaagcaatacagtaggctacaacaga
gggcgaaaaagaagacccatctctgtaataggtggggtcaatttctatggaagcggtcca
gcagaagaaatcgaaggtctgctgacacaacctgccacacggccgccggttcctgcacac
caggtgcccccctacaaagctgtctccgccaggttccgcccactcaccttctcacagagc
acccccatcggcctggaccgtgttgggcgacggcggcagatgagaacatctaatgctgct
gcagatggtgggactgaatcctcagcattggtggatgacaatggcagcgaggaagattac
agttacgaggaactctgccaagccacgccgaggtacctgcagcctggaggggaacagcta
gccattaatgagctgataagcgatggcagcattgtccatgcagaagctctctgggaccat
gtgactatggatgatcaagagctgggtttcaaagctggagatgtcattagagtcctagaa
gcttccaacaaagactggtggtggggaagaattgaggacaaggaagcctggtttccagct
agctttgtcaggctgcgagttaatcaggaagaactgccagaaaattgtagtagtatccag
gatgaagaacaagatgcagatatcagcaaacatcgtcagaaaatagctgaaaacaaggat
cagatgagaaccaacgttatacaggaaattatgaacacagaacgagtctatatcaagcat
ctcaaggacatctgtgagggttatattcggcagtgtcgcaaacatacaggaatgttcacc
acagcccagttaagcatcatttttggaaatattgaggatatttacaaattccaaagaaag
tttctgaaggatcttgagaaacagtacaacaaagaggaacctcatctgagtgagatagga
tcatgctttcttcaacatcaagaaggctttgctatttattcagaatattgtaacaatcat
cccagtgcctgcactgaactttccaagctaatgaaacagggcaaataccgtcacttcttt
gaggcctgtcgtttgctccagcagatgattgacattgccattgacggttttcttctcacg
cctgttcagaaaatctgcaaataccctctgcagcttgcagaattgctcaaatataccact
caggagcacagtgattataacaacataaaagctgcatatgaggctatgaagaacgtagca
tgcctgatcaatgagcgaaaacgaagactggaaagcatagacaagatagcgcgttggcaa
gtgtctatagtagactgggagggcccagatgtgttagccagaagctcggaactcatccac
tcaggagaactgaccaaaatatcaaagcaaggcaaaagccagcagaggactttcttcctt
tttgaccatcaacttgtgttctgtaagaaggacctattgaggagggacatcttgtattat
aaggatcgtattgacatggatgagatggaacttgtagacactgaagatggcagagacaaa
gactttaacattaatgtcaagaatgcctttaagataataaacagagcaacagaagagatt
catttgttctgtgcaaaaaagcaagaggataagaagagatggatggaggcatgcggaagt
gaaaggagaagagttcaagaagataaggaaatgggaatggaaatctcagaaaaccagaag
aaacaagccatgcagaatgcccgtaagtcaaggcatggaaaaatgaaaggtgtaagctat
aacgggtgtcctatgcctcctccacaccaaagcttgcatcccatccatcagcgccacatc
accgtgcctaccagcatcccacagcagcaggtctttgccctggcagaacccaagcggaag
ccatccctcttctggaacaccttcaacaaactcaccccattcaaaaagtga
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