Cygnus atratus (black swan): 118245868
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Entry
118245868 CDS
T09349
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36 isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118245868 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118245868 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cata04147
]
118245868 (VPS36)
Membrane trafficking [BR:
cata04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
118245868 (VPS36)
Exosome [BR:
cata04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118245868 (VPS36)
Exosomal proteins of colorectal cancer cells
118245868 (VPS36)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
DUF1351
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
118245868
NCBI-ProteinID:
XP_035398322
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Position
1:181218670..181238655
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AA seq
386 aa
AA seq
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MDRFAWTSGLLELGETLVVQQRGVRLYDGEEKVKFDSGVLLLSTHRLLWRDQKNHECCIA
IPLSQVVFIEEQAAGIGKSAKIVVHLHPASSNKEPGPFQSSKYSYIKLSFKEHGQIEFYR
RFSEEITQRRWENMPAGQTFQVTKDPQAGRTRAIGIVGIERKLEEKRKETDKNISEAFED
LSKLMEKAKEMVELSKSIANKIKEKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTH
YHMQLAKQLAGMLQTPLEERGGIMSLTEVYCLVNRARGLELLSPEDLVNACKMLESLKLP
LRLRIFDSGVMVLELQSHNEEEMVASALETVSEKGSLTADEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFLTQS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcttcgcctggaccagtgggttgctggagctgggggagacgctggtggtgcag
cagcgcggcgtgcgcctctatgacggggaggagaaggtgaaatttgatagtggagtgtta
ctacttagtacacacagactactttggagggatcagaagaaccatgaatgctgcattgct
atacctctgtctcaggtcgtctttattgaagagcaagcagctgggataggaaaaagtgcc
aaaatagtagttcatcttcatcctgcttcctcaaacaaagagcctggtccgttccaaagc
agcaaatattcctacatcaaactttctttcaaagaacatgggcagattgagttctataga
cgattctcagaagaaatcacacaaaggaggtgggagaacatgcctgccggtcagaccttt
caggttaccaaagatccacaggcaggaagaacaagagctataggaattgtagggattgaa
aggaaattagaagaaaaaagaaaagagactgacaaaaacatttccgaggctttcgaggac
cttagtaaactaatggagaaggctaaggaaatggtggagttatccaagtcaatagctaat
aagattaaagaaaagcaaggtgacatcaccgaggatgagaccattaggttcaaatcatac
ctgctgagtatgggtatagctaatccagtcactagggaaacgcatggatctggtacacat
taccacatgcaactggcgaaacaactagctggaatgctgcagacaccattagaggagaga
ggaggaatcatgtcgctcacagaagtgtactgtctggtaaatcgtgcacgaggactagag
ttgctctcacctgaagatctagtaaatgcttgtaagatgctggagtcactgaaattacca
ctaaggcttcggatatttgacagtggtgtgatggtgcttgagctccagtctcacaacgaa
gaggaaatggtagcttctgctttagagacggtatctgaaaaaggttctctcacagctgat
gagtttgcaaagctggtggggatgtctgttctcttagccaaagaaaggctgcttctcgct
gagaagatgggccatctttgcagagatgattcggtggaaggcttgagattctacccaaat
ttatttctaacgcaaagctaa
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