Cygnus atratus (black swan): 118246019
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Entry
118246019 CDS
T09349
Symbol
ZC3H12C
Name
(RefSeq) probable ribonuclease ZC3H12C isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cata03019
]
118246019 (ZC3H12C)
Messenger RNA biogenesis [BR:
cata03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
118246019 (ZC3H12C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
118246019
NCBI-ProteinID:
XP_035398673
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All DBs
Position
1:complement(191040373..191087352)
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AA seq
890 aa
AA seq
DB search
MSVCFPANEYGTLYIQEYKKNSKVESSTCSSFMGLKDHLGHDLGHLYVGSTGTQINAIVP
WSMADKPTMDKVNSRKEDVDKEASEETSGSSSCDSEESTNSDNDSEKLNNSASESHLLPK
THRQLCRSPCLEPHLLKRNEILQDFRIEEAQIVPKEVKKPPDVVKEYQTKLEFALKLGYS
EEQVQLVLNKLGTDALINDILGELVKLGNKTETDQSVTNANTSVMREASSIESQRSESPL
QEDVPEDGDNLRPIVIDGSNVAMSHGNKEVFSCRGIKLAVDWFLERGHKDVTVFVPAWRK
EQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFESDGIIVSND
NYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPIVPEHKKQ
PCPYGKKCTYGHKCKYYHPERGNQPQRSVADELRAMSRSTAAKTTSEGGLVKSNSVPCST
KNDGTSELKRAAPKRQSDPSIRTQVYQDLEEKLPTKNKLETRSVPSLVSIPSSSAAKPQS
TAPLTNGLPSGVHFPPQDQRPQGQYPATVMMATKNHGTPMPYDQYPKCESPVDVGYYSML
NAYSNLSISGPRSPERRFSLDTDYRISSVASDCSSEGSVSCGSSDSYVGYSDRSYMSSPD
PQLEENLKCQHMHPHGRLNSQPFLQSYHEPLTRVQSYSHEEPKHHHKPPVPYMAVHLQHP
AVGARSSCPNDYPASQSSPHSKTMHLGRALVSTRIDSISDSRLYDNSPLRHRKPFSGQDG
LGSWDRQSYGVDAYGYRQTYSLPSNPTQPCYEQFAFQSLPEQQDQTWRVPYCGIPQDPPR
HQDTREKVYINLCNIFPPDLVRIVMKKNPHVTDAQQLAAAILVEKSQLGY
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgtgttttccagcgaacgaatacggaacactttatattcaggaatacaagaaa
aacagcaaagtggagtcaagtacatgcagcagcttcatgggcttgaaggatcacctgggg
catgacttaggccatctttatgtgggaagcactggcacacaaataaatgcaattgtacct
tggtcgatggcggacaagccgacgatggataaggttaattctaggaaagaagatgtagac
aaggaggcatctgaagagacttcaggaagctccagttgtgactctgaagaaagcacaaat
tccgataatgattcagagaaactgaataattctgcatcagaatcgcatttactgcctaag
actcaccgacagctgtgccgatctccttgcttagagcctcatcttctaaaaagaaatgaa
atcttgcaagactttaggatagaagaggctcagatagtaccgaaggaagtcaaaaagccc
cctgatgtggtgaaagaatatcaaaccaaactggagtttgcacttaagttgggttactct
gaagagcaggttcaacttgtactaaataaacttggtactgatgctttaataaacgatatt
ttgggagaacttgtcaaacttgggaataaaactgagactgatcagtctgtaactaatgct
aacactagtgtaatgcgtgaagcgtcttccatagagtctcagaggtcagaatctccgctg
caggaggatgtgccggaggatggtgacaacctgaggccaatagttattgatggcagcaat
gttgcaatgagccacgggaataaagaagtattttcttgtcgaggaatcaaattggcagta
gactggtttttggaaagaggccataaggatgttacagtgtttgtgccagcatggaggaaa
gaacagtcaagacctgatgctctcatcacagatcaagagatcttgcgtaaattagaaaaa
gagaagattcttgtgttcacaccgtcccgccgagtgcaagggagaagggtggtatgctat
gatgaccgattcatagtgaagctggcctttgagtcagatggcatcattgtttctaatgac
aactacagggatctagctaatgagaagcctgaatggaagaagttcatagatgaacgcttg
ctgatgtattcatttgttaatgacaaatttatgcctcctgatgatcctcttggccgccat
ggcccaagtctggacaattttcttaggaagaagcctattgtgccagaacataagaagcaa
ccttgtccatatgggaagaaatgtacctatggacacaagtgcaaatactatcatccagaa
agaggaaatcagcctcagcgatctgtagctgatgagcttcgtgccatgtctagaagcaca
gctgccaaaactacaagtgaaggaggactggtaaaaagcaatagtgttccctgtagtact
aagaatgatggcacttctgagcttaagcgtgccgctccgaaaaggcaatcggatcctagt
ataaggactcaagtctatcaagacttggaggaaaagcttcccaccaaaaacaaattggaa
accaggtctgtaccttccttagttagcataccaagttcctctgctgcaaaaccccaaagt
actgcacctttaaccaacggccttccatccggagttcatttcccacctcaggatcaaaga
ccacagggacaatatcctgctacagtcatgatggcaaccaaaaatcacggaacgccaatg
ccttacgaccagtatccaaaatgtgagtctcccgtggatgtggggtattactctatgctg
aatgcgtattcaaatctgagtatatctggtccacgtagtcccgaaaggcgcttctccttg
gacacagattataggatcagctctgtggcttctgactgcagcagtgaagggagcgttagt
tgtggcagcagtgattcctacgtgggttacagcgaccgctcctacatgagttcgcctgac
ccgcagctggaggagaacttgaagtgccagcacatgcacccccacggccgccttaactct
cagcccttcttacagagctaccacgagcctctaacccgagtgcagagttacagtcacgaa
gaaccaaagcatcaccacaaacctccagttccgtacatggctgtgcatctgcagcatcca
gcagtcggtgctcgttctagttgcccgaacgactacccagcgtctcagagctcgccgcac
tcaaagaccatgcacctggggagagccctcgtgtccaccagaatcgacagcatttcggac
tcgcgtttgtacgataattctccactgagacacaggaagcctttttctggccaagacggg
cttggaagctgggacaggcagagttacggggtcgatgcctacggctaccgtcagacctac
tccttgcccagtaaccccacgcagccgtgctacgagcagtttgccttccaaagcctgccc
gaacagcaggaccagacctggcgcgtaccttactgtggaatccctcaagaccccccgagg
caccaagacaccagggagaaggtttacataaacctgtgcaacatcttcccccccgatctt
gtgaggattgtcatgaaaaaaaaccctcacgtgacggacgcgcagcagctcgccgcagcc
atcttagtggagaaatctcagctaggttattga
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