KEGG   Cygnus atratus (black swan): 118246037
Entry
118246037         CDS       T09349                                 
Symbol
PARP4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
cata  Cygnus atratus (black swan)
Pathway
cata03410  Base excision repair
cata04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:cata00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    118246037 (PARP4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    118246037 (PARP4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cata03400]
    118246037 (PARP4)
DNA repair and recombination proteins [BR:cata03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     118246037 (PARP4)
SSDB
Motif
Pfam: PARP4_MVP-ID VIT WGR-like_PARP4 PARP VWA_3 VIT_2 VWA VWA_2 BRCT BRCT_2 VWA_CoxE PTCB-BRCT
Other DBs
NCBI-GeneID: 118246037
NCBI-ProteinID: XP_035398698
LinkDB
Position
1:complement(190593136..190636522)
AA seq 1636 aa
MTIFANCVFFVKVRYLPIQEKNSLRACIKENGGVIHYVINRKCTHVLVDTADVLSCHDLK
TIRKYQLPVVYADFIWKSVENGKLLPTNAYEVNTSQGDTSDQWPDRHGLEDLSSSENKNA
TNQNESSDLNPTVIAESDKKIAFKVGTLRFYTENDQDAPFFPQDFEVAKYNVLEKINSKG
SKDFVVIELQCTQEQYDFLFRLYAHFSASTGTKNNKQFIVNKTAEEIRENYDILVANLKS
QDFLLRETFPPEAECLASTKLQKLLLEESINSSAICQQVSDFVELIWAEALGHLDSLLFE
SVKNISLNDVSKAEGILLQVKNGLAEGAGEAALQEMMMEFYELIRHKTEIDYKVSKKLLS
RKQDLCQLIRDMLNIQETNMSCPNPTSLAKYQALRCKIEAVDPMSDEFLNVAQQVLKNNY
NDCPVRILQVYSVGRVSETAEFLGSLGNIRSLFHASSVRNFMGILSRGLLLPKVVVEDHG
LERTDIGNLGSGIYFSDSVSASIKYSSPSEMDGTRLLAVCDVALGSCLDLYERDFSLNDA
PSGYNSVHGVRKTADISSDFEDDEFVVYKTAQVKIRYVVKFCLPEDQIKPFQPGTGVELE
QDNSEPESQCHVQNESYVLPSANISNTVKTGLQDRLGNPVPLEGFHIKARIIDFVAQVVM
FQTYTNQNSSPIEAKYVFPLDDKAAVCGFEAFINGKHIIGKVKEKKQAHREYCKAISQGD
GAYLMDQDAPDIFVISVGNLSPNSTVLIKITYITELSCQNGCITFHMPASVSPWQQDKAL
NENTQDAVKKVCVRQIKTLKNGFSLDMSIEMPYSIERLYSWTHKLKIKKTECKAVIKTVK
NSCLDSSGFGLDIWISQAYLPRMWVEKHPNQRSEACMLVFQPEFEAAFDEEQLSSEIIIL
LDCSNSMAGSMLREAKQIALHALKQLGFRQNVNVVKFGTNFTEFSPFSKDILKDLASLTE
FITSATATLGNTDLWKTLRYLSLLFPSQGHRNLLLISDGHIQNESVTFQIVKDNVYHTRL
FTCGVGSTANRHMLRSLSQYGAGAFEYFDPKSKYNWETKVQRQVSRIFSPGCSSVSIKWQ
QFNINEPEPMQAPAQIQSLFTSERLLVYGFVPHCTQATLRAIINDKELQTVVSTTELQKT
TGTVLHKLTARAFIRDYEDGILHENETEHEMKKQILKNKIIHLSLEHSIITQFTSFVAVE
KRDANEICPADVPNIPEIIAKEDVDILPYMDWDQKPMESEILCSEGFSPACSPGVTDAWS
DYFFSDRGETESFQFQSEELPVIHESTSQKITAQGFGIFSEIQSNTCSLKSNLNFDNGIT
KEESSGAMSSSPHDLRVLDYCNAFSFGSATKLGGGAYLTEKNSLQTPVLPKLGVCMSVPA
LPHPRSLEKLAGGMKPAYSSCVAQTQYSGMFGSPAPTDTILSDKTNVEKQVIPKCPVFQC
DSKAAMSWRKCKKKVAGQHGATASEGVTEGTKVSEQSKSFAAIEKEKIQRRFELTSINLK
EIFELQNQNGSWNLSPQLGKILKFDVDYLINHFLIRKGIQSLGSNGKEKLLQLIATLLVL
QFIRCTKELNGIVFKSLMKLDNLTTSSGVHWTFELIKKAIEWVRRVDRQFPAIYYRLELG
KDWDSATKKILGITFN
NT seq 4911 nt   +upstreamnt  +downstreamnt
atgacaatctttgcaaactgtgtgttctttgttaaagtgaggtacttgcccattcaggag
aagaacagcctaagagcatgtataaaagaaaatggtggagtaattcattatgtgattaat
cgcaagtgtacacatgttcttgtggatactgctgacgtcctcagttgtcatgatctaaaa
actattcggaaatatcagctgcctgttgtatatgcagatttcatttggaaatcggttgaa
aatgggaagcttttgccaactaatgcgtatgaggttaatacatcacagggcgacacttct
gaccaatggccagacagacacggtttggaagacctgtcatcttctgaaaacaaaaatgcc
acaaatcaaaatgaaagcagtgacctcaatcctactgttatagcagaaagtgacaagaaa
attgcgttcaaagtagggacactcagattttacactgaaaatgatcaggatgctcctttt
ttccctcaagattttgaagttgcaaaatacaatgtccttgaaaaaattaactccaaggga
agcaaagattttgtagttattgaattacagtgcacccaagaacagtatgactttctgttc
cgactgtatgcacacttcagtgcttcaactggaaccaagaataataaacaatttatagta
aataaaactgctgaagaaataagagaaaattatgatattttggtggcgaatctgaagagc
caggacttcctgctcagagaaacttttccacctgaagcagaatgtttggcttctacaaaa
ttgcaaaagttacttctagaagaatccataaattcaagtgctatatgccagcaagttagt
gattttgtggaactgatctgggcagaagctcttggccacctggatagcctgctatttgaa
tcagtaaaaaacataagtctaaatgatgtgagcaaagcagaaggtattttgctccaggta
aagaatggactggctgagggagctggtgaggcagcgctacaagagatgatgatggaattc
tatgaacttatacgtcacaaaactgaaatagactataaagtttccaaaaagctgttatct
agaaaacaggacctgtgccagctcatccgagacatgcttaatatacaagaaacgaatatg
tcatgcccaaacccaacatctttggccaaataccaggccctgaggtgcaagattgaagct
gttgatccaatgagtgatgaatttctcaatgttgcacagcaagtgttaaaaaacaattac
aatgactgtccagtgagaattttacaggtgtatagtgttggcagagtaagtgaaacagca
gaatttctgggcagtcttggaaatattcgatccttattccatgcatcatctgtgcgcaat
ttcatgggaattctttccagaggactcctcttgccaaaagtggttgttgaagatcatggc
ctggaaagaactgacattggaaatctgggaagtggcatttacttcagtgattctgttagt
gccagtattaagtattcttcacccagtgaaatggatggaacccgactccttgcagtttgt
gatgtggcacttggatcctgcttagatttgtatgaacgagatttttcattaaatgatgca
ccatcaggttataacagtgtacatggagtccgtaagacagcagacatctcttcagacttt
gaggatgatgaatttgttgtgtacaaaaccgcacaggttaaaattagatatgttgttaag
ttttgccttcctgaagatcaaataaaaccatttcagcctggaactggggtggaactggag
caagataacagtgagccagagtcacaatgtcatgtacagaatgagagctatgtgttaccg
agtgcaaatatttcaaatacagtaaaaactggtcttcaagacagactgggaaatcctgtt
cctttggaaggctttcatattaaggcaaggataatagacttcgtagcacaggtagtaatg
tttcagacctacaccaatcaaaacagtagtccgattgaagctaaatatgtttttcctttg
gatgataaagctgctgtttgtggatttgaagcttttatcaatggaaaacacattattgga
aaggttaaagaaaagaaacaagcacatagagaatattgtaaagctatcagtcagggcgat
ggagcttatctaatggaccaagatgcaccggatatttttgtaataagtgttgggaattta
tctccaaactctacagttctgatcaaaatcacctatatcactgaactgagttgtcagaac
ggttgtatcacttttcatatgcctgcttctgtatcaccatggcaacaggacaaagcactg
aatgaaaacacgcaggatgcagtaaagaaggtttgtgttagacaaataaaaacactgaag
aatggattctccttggatatgtctattgagatgccatatagcattgaacgcctatatagt
tggacacataaacttaaaataaagaaaacagagtgcaaggctgtaattaagactgtgaaa
aacagctgcttggacagcagtggctttggtctagatatatggatttctcaagcctatcta
ccccgaatgtgggtagagaagcatcccaaccaaaggagtgaggcttgcatgcttgtattc
caaccagagtttgaagcagcgtttgatgaagagcagctgtccagtgaaattattatttta
ttagattgctcaaattccatggcaggttcaatgttacgggaagcaaagcagattgcttta
cacgctttgaaacaacttggtttcagacaaaatgtgaatgtagtcaaatttggcacaaat
ttcacagaattttccccattttcaaaggacatcttaaaggatctggcatcgctgaccgag
tttattacatcagctactgcaacattgggaaatactgatctgtggaagaccttacgttac
ttaagtttgctatttccttctcaaggacaccgaaacctccttcttatatctgatggacac
attcagaatgagagtgtgacattccagattgtgaaagataatgtctaccatacaaggtta
tttacatgtggtgttggttccacagcaaatcgtcacatgctgaggtctttgtcccagtat
ggtgctggagcgtttgagtattttgacccaaaatcaaagtataactgggagacaaaggta
cagagacaggtgtccagaatattttctccaggatgcagttctgtttctattaaatggcaa
cagtttaatataaatgaaccagagccaatgcaggctcctgctcaaatacagtctttattt
accagtgagaggcttcttgtctacggatttgtccctcactgtactcaggccaccttaaga
gcaataataaatgacaaagaactacaaactgtggtgtcaactactgaattacagaagaca
acaggaacagtgctacacaaactcacagcaagagcttttattagggactatgaagatggg
attcttcatgagaatgaaacagagcatgagatgaagaaacaaatattgaaaaacaagatt
attcatctcagcttggaacactcaattataacccagtttacaagctttgttgcagttgag
aagagggatgctaatgaaatttgtcctgctgatgttccaaacattccggaaattatagca
aaagaagatgtagatattttaccgtacatggactgggaccaaaagccaatggaatctgaa
attttatgttcagaaggattttccccggcatgttccccaggagtaactgatgcttggtca
gattatttcttcagtgacagaggtgaaactgaaagcttccaatttcaatctgaagaactt
cctgttattcacgagagcacctcacaaaaaatcacagcacagggctttggaattttttct
gaaattcaaagtaacacttgcagtctcaaatcaaatttgaattttgataatggcatcaca
aaggaggaatcttcaggagcaatgtcatcttcaccacatgaccttcgtgtgctggattat
tgcaacgctttctcatttggttcagcaactaagctaggaggaggagcttatctgactgaa
aaaaattcacttcagacccctgtgcttccaaaattaggcgtttgtatgagtgttcctgca
cttcctcatccccgttctcttgaaaaactggcgggaggcatgaaacctgcttattcttct
tgtgttgctcagacacaatattcaggaatgtttggttcacctgctcctacagacacaata
ctttctgataaaacaaatgttgaaaaacaagttattcccaaatgtcctgttttccaatgt
gatagcaaagcagcaatgtcgtggcgaaagtgtaagaaaaaagtagcaggtcaacatggt
gctacagcatctgaaggagttactgagggcactaaggtttcggaacaatcaaagagcttt
gcagcaatagagaaagaaaagattcaacggagatttgagctgacttctataaacttgaaa
gaaatttttgagctccaaaatcagaatggctcttggaatctcagtccccagttgggaaaa
atcttgaaatttgatgttgattatttaattaatcatttccttatcagaaaaggcattcag
tcacttggctcaaatggaaaagaaaagctactgcaattgattgctactcttcttgtgctt
cagttcatacgctgcacaaaggaactgaatgggatagttttcaaatcgctgatgaaactt
gataatttaaccacttcaagcggtgttcactggacttttgagttgatcaagaaagcaata
gagtgggtaagaagagttgacagacaatttccagctatttactatcgacttgaacttggg
aaagactgggattctgccaccaagaagatactgggtatcacctttaactaa

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