Cygnus atratus (black swan): 118246055
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Entry
118246055 CDS
T09349
Symbol
FREM2
Name
(RefSeq) FRAS1-related extracellular matrix protein 2
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118246055 (FREM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cata04091
]
118246055 (FREM2)
Lectins [BR:
cata04091
]
C-Type lectins
Lecticans
118246055 (FREM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
HYR
Motif
Other DBs
NCBI-GeneID:
118246055
NCBI-ProteinID:
XP_035398720
LinkDB
All DBs
Position
1:complement(182156346..182283719)
Genome browser
AA seq
3161 aa
AA seq
DB search
MRAQAAAPPLVGLLLLAGCAWLGAPEPPPGSAAVPSPWAAEPSPAVVVVANRGLRVPLGR
SAWLDPARDLVLRVQPGDRCHLAVLDEDPLWQRPGRLSPRRFPCDFGPREVRYSHLGGRS
PARDRVRLQLRYDSPSSALVLPLVLEVEVLFTQLEIVTRNLPLVVERLRGTSNPLDARSL
EFAFEPGRQRCRVGLLPSLTGLPRYGEILNYPSALVASGEAVDGGPMPASMWDCEEFLRL
GLRYRHTAAGSSPNRDLVPLVAELWEAAGGGAPLKREYFQVLVRIRAGTENVAPKPSFLA
MLMMEVDQFVLTALTPDMLAAEDAESPPDLLLFNITSPFGPGQGHMVSTDDRSLPVSSFS
QRDVRELRIAYQPPVEDSDRERLFELELEVLDPEGAASEPFAFVIVVKPMNTLAPVVTRN
TGLVLYEGQSRPLSGPGPSPNLVISDEDDLEQVRVSVVAGLRHGYLTLLEDTPASAAPRK
HFTVAELAAGRVIYQHDGSESPLSDNLVLRLEDGGSRHRVEFLFPITLVPTDDQPPLLNA
NTGLAIAEGETVPITTRALSATDIDSQDAILLFTVEAGPTAGQLLLRQAQPPPGWEEEEE
DEGFSWRRVSGVVGSSLIYEKPVREWLQQDIVEGRLYYHHFGPHRPGPGVVLDQFVFRVQ
DDNDPPNRSGPQTFVIRVHPVDRLAPELHSGSSLHLIVAEQQVTPLRRKHLCYTDQDSGD
RELRYTVTQPPTDTDTNHPPDEHGARLGSLVLTEDHSVEVTHFTQAQINHHKISYRPPQE
ELGVAPHLIQFQYQVEDAAGNAAEGTFTIYLQPVDNQPPEITNTGFTLPEGGSHVLSPTE
LDASDTDTELAHLRFILTQAPRYGQLQLSGYSLILGGAFGLEDIRQGRVVYVHSGAETNS
DTCRLDVSDGVHVVPITLKMNVHPVDDEVPTLRLPPGTVGSYLDVLENGAAEITANVIQG
TDEDTDDLMLTFIVEDPPQHGNILVQGVPAERFSQRDLLDGAVVYAHTGGEIGLLPKEDT
FNLTLSDLSEEWSIRGNVVQGVSVLVTILPVDNQAPEIFVGEQFRVVEGDKRVITTAHLR
AEDVDTPTDDILCTIVAQPASGYVENISPAPGSEKSRAGIAISAFTLKDLHQGHIFYVQS
IHKGVEPVEDRFAFRCSDGISFSQRHIFPIVIMPMNDEEPEIFMREFVVMEGMSLVIDTP
ILNAVDGDIPADELTFTITRLPRHGHIVNQLANGTVLVESFTLDQITESSNILYEHDDSE
TKEDSFEVKLTDGKHTVVKTVFIMVVPVDDETPRMAINDGLEIEIGETRTIHNRILKATD
LDSEDRTLTYIIRYGPGQGLLQRLKPSGGVENITLGMNFTQDEVDRNLIRYMHFGQEGVR
DLIKFDVTDGINPLIDRYFYVTIGSIDIVFPDVISKGVSLKEGGKVTLTTDLLSTSDLNS
PDENLVFTITRAPVRGHLECTDQPGLPISTFTQLLLAGNKIYYIHTSEDEVKMDSFEFEV
TDGYNPVFRTFRISISDVDNKKPVVTIHNLVVNENEYKLITPFELTVEDRDTPDALLKFI
VTQIPVHGQIMFNNSKPVTTFTKQDLNENLISYRHDGTESVEDSFSFTVTDGTHTDFYVF
PNTVFETRKPQTMKIRIMAVDNSVPQIVINKGAQTLRTLATGHVGFLITNKVLKVEDRDS
LHVTLKIRITEGPRHGFLIHLGKGNHSISQFSQADIDDMKICYVLRAGDNATSDIFHFMV
EDGGGNKLRNQHFRLNWAWISLEKAYYLVNEDSKYLDVVLKRRGYLGETSFISISTRDGT
AKKDKDFRGKAQKQVQFNPGQTLATWRVRILSDGEHEQSESFQIVLSEPVMAVLEFPDVS
TVEIIDPGDESTVFIPQSTYTIEEDVGELFIPVRRSGDVSQELMVICYTQQGTASGTAPT
SVLSYSDYISRPEDHNSVLRFDKDEREKMCRVVIIDDSLYEEAETFDVLLSMPMGGRIGT
EFASTRITIVPDKDDEPAFYFGNDEYYVDESAGYVEVRVWRTGTDLSKAASVTVRSRKSE
PITAEAGVDYVGISRNLDFAPGVSMQTFRVVILDDLGQPVLEGTEKFELVLRMPMNAALG
EPSKATIFINDSVSDLPKMQFKESLYVGNENDGQISAVIYRSGDIRYTSTVRCYTRQGSA
QVMIDFEERPNTDSSIVTFLPGETEKPCTLVLTDDTFHEEDEELRLVLGTPRSDSSFGAS
VGEQNETLIKIQDDADKAIIKFGETKFSVSEPKDTRQVAVVKIPVLRLGDTSKVSVVRVH
TKDGSATSGEDYHPISEEIEFKEGETQHFVEIEVLYDGVREMREAFTVHLKPDENMVAEI
QAAKAIVYIEEMNSMADVTFPSVPQVASLLIYDDTSRAKDRTSPVAGYPVICITACNPKY
EDFDKTGSICASENINNTLTQYRWLVSAPTGPDGVTSPMKEVDFDTFFTSSKMITLDSIY
FQAGSRVQCAARAVNSDGNEGLELMSPIVTISTSEGLCQPRMSGVVGAEPFSAKLRYTGP
EDPAYANLIKLTVTMPHIDGMLPVISTRELSNFELTLSPDGTRVGNHKCSNLLDYTEVKT
HHGFLTDATKNPDVIGDTIPYQYSPTIRGFNTLRFYRNLNLEACLWEFVSYYDMSELLTD
CGGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGVGGWQHFDLQSELRLTFVYDTAIL
WKDGIGSPPEAELQGSLYPTSMRISEEGRLVVNFKTEARFRGLFVMSHPASSLTSMVMSA
DHPGLTFSLSLIRSEPTYNQPVQQWSFISDFAVRDYSGTYTVKLIACTAAPHQEYSLPVI
CNPREPLTFDLDIRFQQVSDPVAAEFSLNTQMFLLSKKTLWLSDGSMGFGQESDVAFSEG
DIIYGRVMVDPVQNLGDSFYCSIEKVFLCTGADGYVPKYNPSNTEYGCLADSPSLLYRFK
IVDKAQPETQATSFGNVLFNAKLAIDDPEAISLVKQPGSDGFKVDSTPLFQVSLGREWYV
HTIYTVRSKENANRGIGKRSVEHQYHSLFSGGGPGASTQRRQKRGVAGAPELAKDIGVEN
NRGTNIQHIALDRTSKKQVPQREVVVNGVLPRELNNQNSGVSIVTIVGGAAAIFLAICLI
AIIVLLLKWRQNSEKKEAAKKSGSNEPMMLPDNYTSDSSEV
NT seq
9486 nt
NT seq
+upstream
nt +downstream
nt
atgcgggctcaggccgccgcgccgccgctggtcggcttgctgctgctggccggctgcgcc
tggctcggggctccggagccgccgccaggcagcgccgcggtcccctcgccctgggcagcg
gagccgtcccccgccgtggtggtggtggccaaccgcggtctgcgggtgcccctggggcgc
tccgcctggctggaccccgcccgcgacctggtgctgcgggtgcagccgggcgaccggtgc
cacctggccgtgctggacgaggacccgctgtggcagcgccccggccggctgagcccccgg
cgcttcccctgcgacttcggtccccgcgaggtgcggtactcccacctgggcggccgcagc
cccgccagggaccgggtccgcctgcagctgcgctacgactcgcccagcagcgccctggtg
ctgcccctggtgctggaggtggaggtgctcttcacccagctggagatcgtcacccgcaac
ctgcccctcgtcgtcgagcgcctccgaggcaccagcaacccgctggacgcccgcagcctg
gagttcgccttcgagccgggccggcagcgctgtagggtgggcttgttgccgtcgttgacc
gggctgccccgctacggagagatcctcaactacccctcagccttggtggcgagtggggag
gctgtggatggtggccccatgcctgcctcgatgtgggactgcgaggagttcctgcgcttg
gggctgcgctaccggcacacggcagccggcagctcgcccaaccgcgacctggtgccgctg
gtggctgagctgtgggaggcagcgggtggtggggcaccgctgaagcgtgagtacttccag
gtgctggtgcggatccgggcggggacagagaatgtggctcccaaacccagcttcttggct
atgctcatgatggaggtggaccagtttgtcctcactgccctcacgcctgacatgctggcg
gccgaggatgctgagtcacccccggacctgttgctcttcaacatcacctcaccctttggt
cccggccaagggcacatggtcagtacggatgaccggagcttgcctgtctcctccttcagc
cagcgcgacgtgagggagctgcgcatcgcctaccagccacccgtggaggactcggatcgg
gagcgtctctttgagctcgagctggaggtgttggaccctgagggtgctgcctcagagccc
ttcgccttcgtgattgtggtgaagcccatgaacaccctagcgccggtggtgacccgcaac
actggccttgtgctctatgaggggcagtcacggcctctctcgggccctggtcccagcccc
aacctggtgatcagtgatgaggatgaccttgagcaggtgcgggtgagtgttgtggcaggg
ctgaggcatggctacctcactctgctggaggacaccccggcatctgctgctcctcgtaaa
cacttcacagtggctgagctggcagcaggccgggtcatttaccagcatgatggcagtgag
tctccactcagtgacaatctggtgctgcggctggaagatggtggctcccgtcaccgtgtt
gaattccttttccccattaccctggtgcccactgatgaccagccacccctactcaatgct
aacacgggactggcgatagctgagggtgaaacagtgcccatcactacccgtgctcttagt
gctactgacattgactctcaggatgccatcctgctcttcacagtggaggctggccccact
gctggccagctcctcctccgtcaagcacagccacctcctggctgggaagaggaggaagaa
gatgagggcttttcttggaggagggtgtcaggtgtagtagggagctccctaatctatgaa
aagccagtgagagagtggctgcagcaggacattgtggaagggcgtctctactaccaccac
tttgggcctcatagacctggccctggggttgtgttggaccagttcgtctttagggtccaa
gatgacaatgacccacccaaccgctctgggccacagacatttgtgatccgggtgcatcct
gtggacagattagccccagagctgcacagcggcagcagcctgcacttaatagttgcggaa
cagcaggtgactcccctgcggaggaagcacttgtgttacacagaccaggattcaggggac
cgtgagctccgctacacagtaacccagccccccactgacaccgacactaaccaccctcca
gatgagcacggagcccgtcttggatcccttgtgctgactgaggatcactccgtggaggtt
acccacttcacccaagcccagatcaatcatcacaagatctcctaccgtccgccacaggaa
gaattgggagtggctcctcatttgattcagtttcagtatcaggtggaagatgccgccggc
aatgcagctgaaggaactttcaccatctacctgcagcccgtggataatcagcctcctgaa
atcactaacactggctttactttacctgagggaggcagccatgtccttagcccaactgag
ctggatgccagtgatacagacactgagctagctcatctccgatttatcctgacccaggcc
cctcggtacggtcagctgcagctttctgggtacagtttgatcctgggaggtgcctttggc
ttggaggatatccggcaagggagggtggtgtatgtacacagtggggctgagaccaacagc
gatacgtgtaggcttgatgtgagtgatggggttcatgtcgtgcccatcacgttaaaaatg
aatgtgcacccagttgatgatgaggttcctaccctacggttgcccccaggcactgttggt
tcctacctggatgtgctggagaatggtgctgctgaaatcactgctaatgtgatccagggc
actgatgaggatacagatgacttaatgttgaccttcattgtggaggatcctcctcaacat
gggaacatcctcgtccaaggggtgcctgcagagagattttcccaaagggatctgctggat
ggtgctgtggtgtatgctcatactgggggtgaaataggccttctgcccaaagaagatacc
ttcaaccttacattgtctgacctgtctgaggagtggagcatcaggggcaatgtcgttcaa
ggagtttcagtcttggtgaccattctccctgttgacaatcaagccccagagatttttgtg
ggggagcagttcagagtagtggaaggtgacaaacgcgtcattactactgctcacctaagg
gctgaagatgtagatactcctactgatgatatactctgcaccattgttgctcagcccgca
tctgggtatgtagagaacatctctccagccccaggatctgaaaaatccagagcaggtata
gctataagtgcttttaccttaaaagacctccatcaagggcatattttttatgtccaaagt
atacataagggtgtagagcctgttgaagatagatttgctttccgctgttctgatggcatt
agcttttcccaaaggcacatcttccccattgtcattatgccaatgaatgatgaagagcct
gaaatctttatgcgagagtttgttgttatggaaggcatgagcctggttattgatacccct
atcctcaatgcagttgatggggacatccctgctgatgagttaacgttcacgatcaccagg
cttccaaggcacggccacattgtgaaccagctggccaatggaactgtcctagttgagagc
ttcaccttggatcagataacagagagctccaacatactctatgaacatgatgactctgag
acgaaggaggacagttttgaggtgaaactcacagatggtaaacatactgtagtgaaaacg
gtgttcataatggttgttcctgtagatgatgagacacctagaatggccatcaatgatggt
ttggagattgaaataggggaaactagaactatccataacagaatattgaaggctactgac
ctagactctgaagacagaaccttgacatatattataaggtatgggccaggacaaggcctc
ttacagagactaaaaccttcaggtggagttgaaaatatcaccctggggatgaacttcacc
caagatgaagtggatagaaacttaattcgatatatgcactttggccaagaaggtgttcgt
gatcttatcaaatttgatgtgacagatggaataaatccactcattgatcgctacttttat
gtgacgataggtagcattgacattgtcttcccagatgtaattagcaaaggagtttctctg
aaggaaggaggaaaggtaacccttacaaccgatttgcttagcaccagtgacttgaatagt
cccgatgagaacttagttttcactattaccagagcacctgttcgtggtcatcttgaatgc
acagatcagcctgggctgcccatctccacttttactcagctcctattagcaggcaataaa
atttattatattcacacttcagaagatgaggtgaaaatggacagctttgagtttgaagtc
actgatggctacaaccctgtatttcgtactttcagaatttctatcagtgatgtggataat
aagaaaccggttgtcacaattcataacctggtggtgaatgaaaatgaatacaaactgata
acaccatttgaactgactgtagaagacagagatacacctgatgcgctgctaaaatttatc
gtcactcaaataccagttcatggtcagatcatgttcaataattccaaaccagtcaccacc
ttcactaaacaagatctaaatgaaaatctaatcagctacagacatgatggcacagaatca
gttgaggacagcttctctttcactgttacagatggcactcacactgatttctatgtcttc
cccaacactgtgtttgaaacgaggaaacctcagaccatgaagattcggataatggctgtg
gataacagcgtacctcaaatcgtaattaacaaaggtgctcaaactctacgaactctggcc
acgggtcatgtagggtttctgattaccaacaaggtgctcaaagtggaagacagggacagt
ttacatgttactctcaagatcaggatcacagagggtcctcgccatggattcctgattcac
ctggggaaaggcaaccatagcatcagccaattcagccaagctgatattgatgatatgaag
atatgctatgttctacgagcaggtgacaatgccaccagtgacatttttcatttcatggtt
gaagacggtggaggcaataagctgagaaatcagcattttcgtctaaactgggcatggatc
tccttagaaaaggcatattatttggtaaatgaagattccaaatatcttgatgttgttctt
aaacggagaggttacctgggagaaacctcttttataagtattagcaccagagatggtact
gccaagaaagataaagacttcagaggaaaagcacagaagcaggtgcagtttaatcccgga
caaaccttagctacatggcgagtacggattttgagtgatggtgaacatgaacagtctgag
tcttttcaaattgttctttctgagcctgtcatggcagttctggaatttccagatgtatcc
acagtggagattattgatccaggagatgaatcaactgtttttattcctcagtccacgtat
actattgaagaagatgttggtgagttatttattccagtcagaagaagtggagacgtgagc
caggaactgatggttatctgttacacccaacaaggaacagcatctggcaccgccccaacc
tctgtactttcatactccgactacatatccaggcctgaggatcacaacagtgttctacgt
tttgacaaagatgaacgagaaaaaatgtgtcgggtagtcatcatagatgattccttgtat
gaagaggctgagacctttgatgttctgctgagcatgccaatgggtggaagaattggtaca
gaatttgcaagcactcgaattaccattgtgcctgacaaagatgatgaaccagcattctac
tttggaaatgatgaatactatgttgacgagagtgctggctatgttgaggtacgtgtctgg
aggactggaaccgatctgtctaaagctgcctctgttacagtaaggtctcgcaaatctgaa
ccaataactgcagaagctggtgtagattatgtaggcatcagtcgtaatttggattttgcc
cctggagtcagtatgcagacgtttcgcgtggtaattctggatgaccttggacagccggtg
ttagaaggaactgagaagtttgagcttgtgctaaggatgcctatgaatgctgcccttgga
gaacccagcaaggcaaccatcttcattaatgactcagtctctgatttgcctaagatgcag
tttaaagaatctttatatgtaggcaatgaaaatgatggacagatttctgccgtgatatac
aggagtggggatatccgatacacatccactgtgagatgctatacaaggcaaggttcagct
caggtaatgattgactttgaggagcgtcctaatactgacagttccatcgtcaccttcctt
cctggtgagactgagaagccttgcacactggtgcttacggatgatactttccatgaagaa
gatgaagaactacgcctggttcttggcactccaagaagtgattcttcctttggtgcctct
gttggtgaacaaaatgagaccctgataaagattcaggatgatgcagacaaagctattatt
aagtttggtgagaccaaatttagtgttagtgaaccaaaggacacaagacaagtagcagtt
gtaaaaatcccagtgcttcgtctgggagacacttccaaggtttctgttgtgagagttcat
acaaaggatggatctgctacttctggagaagactatcaccctatatcagaagaaattgag
tttaaggagggcgaaacacagcactttgtggaaattgaagttctctatgatggagttagg
gagatgagagaagccttcactgttcacctgaagcctgatgagaacatggtcgctgaaata
caggcagccaaggccattgtttatattgaagaaatgaacagcatggcagatgtcaccttt
ccctccgtccctcaagttgcatcccttttgatatatgatgatacttctagagccaaagac
agaacaagtcctgtagctggctatcctgtcatctgtattacagcttgcaatcctaaatat
gaagactttgataagactggttcaatatgtgccagtgagaacatcaataacaccctgaca
caataccggtggcttgtgagtgcacccactggtcctgatggtgtgactagtcctatgaag
gaggtcgactttgataccttcttcacttcctccaagatgatcacacttgactccatttac
tttcaagctggttctcgtgtccagtgtgctgctcgtgctgtgaattcagatggaaatgag
ggtcttgaacttatgagccctattgtaactataagcacatcagaaggtctttgtcaacct
cgtatgtcaggagtagttggagcagaaccattctctgccaaattgcgctatactggccca
gaggatccagcttatgccaatctcatcaaattgacagtcacgatgccacatatcgatggc
atgctgcctgttatttctacaagagagctctccaattttgagctgacacttagccctgat
ggaactagagttggaaaccataagtgctccaacttgttggattacacggaagtgaagacc
caccatggtttcctgactgatgctaccaaaaatccagatgtgattggagataccattccc
taccagtacagcccaacaattagaggcttcaataccttacgcttctaccgaaatttgaat
ctagaagcttgtttatgggagtttgttagctactatgacatgtctgagctcctcacagat
tgtggaggcaccattgggacagatggacaggttctcaacctagtacagtcctatgtcaca
ttgagagtccccttgtatgtctcttatgttttccactctcccgtgggtgtaggaggctgg
cagcattttgatctccagtctgagctacggctcacttttgtgtatgacactgccatcctg
tggaaggacgggattgggagcccacctgaagcagagctccaaggttctctgtacccaacc
agcatgcgtattagtgaagagggacgcttggttgtcaacttcaagactgaagcccggttt
cgtggtctgtttgtgatgtcccatccggcttcatctctaacttccatggttatgtcagct
gatcacccaggcctgacattcagcctcagcctcatccgaagcgagccaacctacaaccag
ccagtacagcagtggagcttcatttcagattttgcggttcgagactattctggaacgtac
actgtgaagctgatagcttgtaccgctgctccacaccaggagtacagcctaccagtgatc
tgtaatcctagagagccgctcacatttgatctggacatccgattccaacaggtcagtgat
ccagtggctgctgagttcagcttgaatacccagatgttcctcctctccaaaaagacacta
tggctatctgatggctcaatgggctttgggcaagaaagtgatgttgctttctcagaaggt
gatatcatttatggtcgggtgatggtggatccagtgcagaacctgggtgattccttctac
tgcagcattgagaaggttttcctgtgcacgggagctgatggatatgtacccaagtataat
ccatccaacactgaatatgggtgccttgctgattctccatcccttctgtacagatttaag
attgtggacaaagctcaaccagagacacaagccacaagctttggaaatgtgctttttaat
gcaaaacttgccatagatgatcctgaagcaatttctttagttaaacaaccaggctctgat
ggatttaaagtggactcaactcccctgttccaggtgtctttgggtagggagtggtatgtc
cacacaatctacactgtacgttcaaaagagaatgctaaccgtggaattggcaaaagaagc
gtagagcaccagtaccactcgctctttagtggaggaggcccaggagcgtccacacagaga
cgtcagaagagaggagttgcgggagctccagagcttgcaaaagacattggagtagaaaac
aaccgaggaacaaacatacaacacatagcactagatcgcaccagcaagaaacaggttcct
caaagggaggttgtggtcaatggtgtactccctagagaactgaataaccagaactcaggg
gtcagcatagtcacaatcgttggtggagctgctgccattttccttgccatctgcttaatt
gcaatcatcgttttgctgctaaaatggagacaaaattctgagaagaaggaagccgcaaag
aagtcaggcagcaatgaaccaatgatgctaccagacaattataccagtgacagctctgag
gtttga
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integrated database retrieval system
