Cygnus atratus (black swan): 118246060
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Entry
118246060 CDS
T09349
Symbol
SFTPD
Name
(RefSeq) pulmonary surfactant-associated protein D
KO
K03991
mannose-binding lectin
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118246060 (SFTPD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118246060 (SFTPD)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cata04091
]
118246060 (SFTPD)
Membrane trafficking [BR:
cata04131
]
Endocytosis
Phagocytosis
Opsonins
118246060 (SFTPD)
Lectins [BR:
cata04091
]
C-Type lectins
Group 3: Collectins
118246060 (SFTPD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
Collagen
Surfac_D-trimer
DUF5075
DUF4988
Motif
Other DBs
NCBI-GeneID:
118246060
NCBI-ProteinID:
XP_035398743
EnsemblRapid:
ENSACYG00000003409
LinkDB
All DBs
Position
7:complement(32902792..32908107)
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AA seq
256 aa
AA seq
DB search
MTLLQPFSALVLWISLMMLMSSVNTDKPEENRYSCPVIQCSAPAVNGLPGRDGRDGPKGE
KGDPGEGLRGLQGFPGKAGPPGMKGDVGPRGEKGQKGEQGIVATDGLQRQVTALETKLKV
LEDELNRYKNALILKNIRSIGKKMFVSTGNQDTFENGKSLCARAGSTLASPRNDAENTAL
KDLLRPARQAHIGISDAQTEGRFVYLSGGAVTYSKWNTGEPNNLRNEDCVVIQESGKWND
VDCSNTQALIICEFLS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgactctccttcagcctttcagtgccctggtactttggatttcactgatgatgttaatg
agttcagttaacacagataaacctgaagagaataggtattcctgcccagtaattcagtgc
agtgctcctgcggtcaatggtttaccaggcagagatggaagagatggtcccaaaggtgaa
aagggagacccaggagaaggattgagaggtctgcagggttttcctggaaaagcaggacct
cctggaatgaaaggagatgtaggaccacgaggagagaaaggacaaaaaggagaacaagga
attgtagcaaccgatggcctgcagagacaagtaactgctttggaaacaaaactcaaggtt
ttggaagatgaattaaatagatacaaaaatgctttgattttaaagaacatcagaagcatt
ggtaaaaaaatgtttgtctcaactggaaaccaagatacttttgaaaatggaaaatccctt
tgtgcgagagctggaagtacacttgcttctcctaggaatgatgctgaaaatacagcttta
aaagacttactgagacctgcaaggcaagctcatatagggatatctgatgcacagactgag
ggcaggtttgtgtacctgagcggaggggctgtaacttactcaaaatggaatactggagaa
ccaaataatctaagaaatgaagattgtgtggtaatacaagaatctggaaaatggaatgat
gtggactgttcaaatacacaggccttaattatctgtgaattcttgagctga
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integrated database retrieval system
