Cygnus atratus (black swan): 118246063
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Entry
118246063 CDS
T09349
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118246063 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cata04990
]
118246063 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
cata04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
118246063 (PDLIM5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
Motif
Other DBs
NCBI-GeneID:
118246063
NCBI-ProteinID:
XP_035398785
EnsemblRapid:
ENSACYG00000005850
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Position
4:complement(9277492..9408409)
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AA seq
594 aa
AA seq
DB search
MSNYTVSLVGPAPWGFRLQGGKDFNMPLSISRLSDGGKAARAHVGIGDVVLTIDGISTDG
MTHLEAQNKIKACTGNLNMTLQRVASVPKPDLIHVPKEEPKEVVKPVPIASAAAPKFTAT
ASVAYNKTPRPFGAVTSSKVTSIPSPSSAFTSAQAAAVPPAPAPFAAPGLHVNAKPNADG
WPPAPSTAKPAVNVPRQPATHNAALSGHVGDGAQEVAEGPRRGFRENQGDSKQQNGPPRK
HIVDTYTEFYHTPTHSDASKKRLIEDTEDWHPRTGTTQSRSFRILAQITGTDHMKEPEHE
AAKKTNDSMEASQPAAYTATSVRSMPASYESPDTRPSPNTTTSAATLKPTGPPSTAKYSG
WQPANQTAPASGWTSNSIKPSGKTAPSQKFATPPQLTEQDTLVQRAEHIPAGKRTPMCAQ
CNQVIRGPFLVALGKSWHPEEFNCAHCKASMAYIGFVEEKGALYCEVCYEKFFAPECSKC
QRKILGEVINALKQTWHVSCFVCVACHNPIRNNVFHLEDGDPYCETDYYALFGTMCHGCE
FPIEAGDRFLEALGHTWHDTCFVCSVCSDSLEGQTFFSKKDKPLCKKHAHSINI
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacaccgtgtctcttgtcggcccggctccttggggtttcaggctccaaggt
ggcaaggatttcaacatgcccctgtccatctctcggcttagtgacggtggaaaggcagcc
cgagcacacgtggggattggcgacgtggttctcaccattgatgggataagtactgacggg
atgactcatctagaagcacaaaacaagatcaaggcatgtacaggcaacttgaacatgact
ctgcaaagagttgcttctgtaccaaaacctgatcttattcatgtaccaaaggaagaacct
aaagaagtagttaagcctgtgcccattgcctctgctgctgcacctaaattcactgccaca
gccagcgtggcttacaataagaccccgaggcccttcggagctgtgacctcctcaaaagtc
acctccatcccatcaccatcctctgccttcacctcagcccaggcggcggccgtgcccccc
gccccggccccgtttgctgcaccaggactgcatgttaacgccaagcctaacgctgacggg
tggccacccgcgccgagcactgctaaacctgccgttaatgtcccacggcagcccgccacg
cacaatgccgccctgagtggccatgtcggcgacggtgcccaggaggtggcggaggggccg
cgacgaggattcagagagaaccagggtgacagtaaacagcaaaatggccccccgcggaag
cacattgtggatacctatacggagttttaccacacccctactcacagcgatgccagcaag
aagagactgatcgaagacactgaagactggcatccccggacaggcaccacccagtcacgc
tccttccgcatccttgcccaaatcaccggcactgatcacatgaaagaaccagaacacgaa
gctgcaaagaagactaatgactccatggaggcttcccaacctgctgcttacacggccact
tcggtgaggagcatgcctgctagctatgaaagcccagacactagaccttctcccaacacc
accacatctgctgcaaccctcaagccaacggggcccccaagcactgccaagtactcgggc
tggcagcctgcaaaccaaacagctcctgccagtggatggacatcaaacagtattaaaccg
tctggaaaaactgccccaagtcaaaagtttgcgacaccacctcagctaacggagcaagac
acattggttcagagggcagagcatattccagcgggaaagcgtactccaatgtgtgcacag
tgtaatcaagtcattagaggacccttcttggtggccttggggaagtcgtggcacccagag
gagtttaattgtgctcactgcaaagcctccatggcttacattggatttgtggaagagaaa
ggggctctgtattgcgaggtctgctatgagaagttcttcgccccggagtgttcaaagtgc
cagagaaagatccttggagaagtaataaatgctttgaaacaaacttggcacgtttcctgc
tttgtgtgtgtggcctgtcataaccccatccgcaataatgtcttccacttagaagatggt
gatccctactgtgagacggattactatgccctctttggtactatgtgccatgggtgcgaa
ttccccattgaagctggagacaggtttcttgaagccctgggccacacttggcatgacact
tgttttgtatgctcggtatgcagtgacagtttggagggtcagactttcttctccaagaag
gacaagccactgtgcaagaaacacgctcactctatcaacatctga
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