Cygnus atratus (black swan): 118246169
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Entry
118246169 CDS
T09349
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cata03021
]
118246169 (TAF1B)
Transcription machinery [BR:
cata03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
118246169 (TAF1B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
N6_Mtase
Motif
Other DBs
NCBI-GeneID:
118246169
NCBI-ProteinID:
XP_035398926
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All DBs
Position
3:complement(16126956..16178155)
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AA seq
603 aa
AA seq
DB search
MVLHGSGSLVLLSPLSVCFLSYFIPFSFLRDFNERCAQCSEVNWGLTDGGRFYCRTCHNV
TERTRDVVNTEVICNARIQTISKGSRNRGKSEEGWEWYVCEGFQLVLKKQAEALEALGVC
PQMKDEILCNFWRRYLQKSQQAYCDRPAGEAVKTLSVCDSSTDMDSEPERPSLLHLLSLS
ESDGDLQTDCSFASSSGKVSECTSMCSGSVDGKLYLMKNQKEKLRMSMPMTLSLCYMALL
WLREPMTLSDLLRFVVEGHIPYLNVYQDFPEKMKLYGLDLKIFCVESWPVYEEVYSKMIE
LAAFLDLPRFPDITESCFLHPDMLCMKYLMEINLPDELHNWTCRVVKKIGFGEVDFLTLT
PGNKSTRKVKYDVLAAAIIVVVLKLLFLLDDHYEWLLSDFAAERNKNNKEGGPYFEFKKW
YKVIKRSLDVEQMKLDEERAKYLWRCEKPLFYSVKKKSKVLRRRQMVVNLQNQFGKLSGA
VRPAERPNPSSFQLSWSEENTDGTCFHGHSLKGILQEKNSVLTTINPDYWLCTIRLCPEK
LCGHLAHYKEVDFPQSYHFVLRLFSFLLRIQPSYIHEEVCVIEHKLFHKKLSKKPKYNTG
LRK
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggttcttcacggttctggaagcttagttttactttcacctctcagtgtctgcttcctg
tcttattttattcccttttcatttctgagagatttcaacgaacgctgtgcacaatgttca
gaagtaaactggggtcttactgatggaggcaggttttattgcagaacttgccacaatgtt
actgagagaactagagatgttgtaaacactgaagttatttgtaatgcaagaatacagaca
atctccaaaggctcaagaaatcggggaaaaagtgaggaaggctgggaatggtatgtttgc
gaaggctttcagcttgtactcaagaaacaagctgaagctttggaagcactaggagtgtgt
ccacaaatgaaggatgaaattctgtgcaatttttggaggcgttacctccagaagagccaa
caggcatattgcgacagaccagctggtgaagctgtcaaaacattatcagtgtgtgatagc
agtacagacatggatagtgaaccagagagacctagcctccttcacttgttatctctctct
gaaagcgatggagatctacagacagattgcagctttgcctcgtcaagtggcaaggtctca
gaatgtacctctatgtgctctggatcggtagatggtaaactgtatttaatgaagaatcaa
aaggagaaactgaggatgtcgatgccaatgaccctttcgttgtgttacatggcattgctc
tggctgagagaaccgatgacgttatctgatctcttaaggtttgttgtcgaaggtcacatt
ccatatttgaacgtttatcaggattttccagagaagatgaaattatatggccttgatctt
aagatcttttgtgtcgagtcatggcctgtgtatgaagaggtgtacagcaaaatgattgaa
cttgcagcctttttagacctgcctcgttttccagatataacagagagctgctttctccat
ccagatatgttgtgcatgaagtacttgatggaaattaatttacctgatgaattgcataat
tggacttgtcgagtggtgaaaaagattggtttcggagaagtggatttcctgactctcacg
cctggaaataaatcaacaagaaaagtgaaatacgatgtccttgctgcagcaataattgta
gtagttctgaaattattgtttttattagatgatcactatgaatggttactttcagacttt
gctgcagaaagaaataaaaataacaaagaaggtggtccatattttgagttcaaaaagtgg
tacaaagttataaaacgttccttggatgtggagcaaatgaaactggatgaagaaagagcc
aagtatctgtggagatgtgaaaagccattgttttattcagtcaagaagaaatccaaagtt
cttaggagacgacagatggttgtgaacttgcaaaatcagtttggcaagctgtctggtgca
gtgcgacctgctgaaaggccaaatccttcaagttttcagttaagttggtctgaagaaaac
acagatggaacttgttttcatgggcatagcctgaagggaattttgcaagaaaaaaacagt
gtacttacaaccatcaaccctgactattggctgtgcacaattagactatgtcctgaaaaa
ttgtgtggtcatctggctcactacaaagaagtggactttccccagagttaccattttgtg
ctaaggctattctcctttcttctgaggatacagccctcttatatccatgaagaggtgtgt
gtgatagaacacaaactttttcataaaaaactctctaaaaagccaaaatacaacacaggc
ttaaggaagtag
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